data_8R2I # _model_server_result.job_id X1_BxS0ZwjR0ACUO3IsAzA _model_server_result.datetime_utc '2024-10-20 01:35:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8r2i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"BB","auth_seq_id":514}' # _entry.id 8R2I # _exptl.entry_id 8R2I _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 536.873 _entity.id 15 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-CAROTENE _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8R2I _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8R2I _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details undecameric _pdbx_struct_assembly.oligomeric_count 11 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 15 Q N N ? 15 IA N N ? 15 JA N N ? 15 BB N N ? 15 CB N N ? 15 DB N N ? 15 LB N N ? 15 PB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 L FE FE2 . A FE2 401 1_555 D NE2 HIS 212 D HIS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.791 ? metalc ? metalc2 L FE FE2 . A FE2 401 1_555 D NE2 HIS 266 D HIS 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.788 ? metalc ? metalc3 L FE FE2 . A FE2 401 1_555 IB O3 BCT . D BCT 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc4 N MG CLA . A CLA 403 1_555 RB O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc5 S MG CLA . B CLA 501 1_555 SB O HOH . B HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc6 BA MG CLA . B CLA 510 1_555 SB O HOH . B HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc7 C OD1 ASN 7 C ASN 27 1_555 YA MG CLA . C CLA 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc8 UA MG CLA . C CLA 507 1_555 TB O HOH . C HOH 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc9 GB MG CLA . D CLA 401 1_555 UB O HOH . D HOH 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc10 E NE2 HIS 17 E HIS 23 1_555 OB FE HEM . E HEM 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc11 OB FE HEM . E HEM 101 1_555 F NE2 HIS 12 F HIS 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? # _chem_comp.formula 'C40 H56' _chem_comp.formula_weight 536.873 _chem_comp.id BCR _chem_comp.mon_nstd_flag . _chem_comp.name BETA-CAROTENE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BCR sing 70 n n C1 C6 BCR sing 71 n n C1 C31 BCR sing 72 n n C1 C32 BCR sing 73 n n C2 C3 BCR sing 74 n n C2 HC21 BCR sing 75 n n C2 HC22 BCR sing 76 n n C3 C4 BCR sing 77 n n C3 HC31 BCR sing 78 n n C3 HC32 BCR sing 79 n n C4 C5 BCR sing 80 n n C4 HC41 BCR sing 81 n n C4 HC42 BCR sing 82 n n C5 C6 BCR doub 83 n n C5 C33 BCR sing 84 n n C6 C7 BCR sing 85 n n C7 C8 BCR doub 86 e n C7 HC7 BCR sing 87 n n C8 C9 BCR sing 88 n n C8 HC8 BCR sing 89 n n C9 C10 BCR doub 90 e n C9 C34 BCR sing 91 n n C10 C11 BCR sing 92 n n C10 H10C BCR sing 93 n n C11 C12 BCR doub 94 e n C11 H11C BCR sing 95 n n C33 H331 BCR sing 96 n n C33 H332 BCR sing 97 n n C33 H333 BCR sing 98 n n C31 H311 BCR sing 99 n n C31 H312 BCR sing 100 n n C31 H313 BCR sing 101 n n C32 H321 BCR sing 102 n n C32 H322 BCR sing 103 n n C32 H323 BCR sing 104 n n C34 H341 BCR sing 105 n n C34 H342 BCR sing 106 n n C34 H343 BCR sing 107 n n C12 C13 BCR sing 108 n n C12 H12C BCR sing 109 n n C13 C14 BCR doub 110 e n C13 C35 BCR sing 111 n n C14 C15 BCR sing 112 n n C14 H14C BCR sing 113 n n C15 C16 BCR doub 114 e n C15 H15C BCR sing 115 n n C16 C17 BCR sing 116 n n C16 H16C BCR sing 117 n n C17 C18 BCR doub 118 e n C17 H17C BCR sing 119 n n C18 C19 BCR sing 120 n n C18 C36 BCR sing 121 n n C19 C20 BCR doub 122 e n C19 H19C BCR sing 123 n n C20 C21 BCR sing 124 n n C20 H20C BCR sing 125 n n C21 C22 BCR doub 126 e n C21 H21C BCR sing 127 n n C22 C23 BCR sing 128 n n C22 C37 BCR sing 129 n n C23 C24 BCR doub 130 e n C23 H23C BCR sing 131 n n C24 C25 BCR sing 132 n n C24 H24C BCR sing 133 n n C25 C26 BCR doub 134 n n C25 C30 BCR sing 135 n n C26 C27 BCR sing 136 n n C26 C38 BCR sing 137 n n C27 C28 BCR sing 138 n n C27 H271 BCR sing 139 n n C27 H272 BCR sing 140 n n C28 C29 BCR sing 141 n n C28 H281 BCR sing 142 n n C28 H282 BCR sing 143 n n C29 C30 BCR sing 144 n n C29 H291 BCR sing 145 n n C29 H292 BCR sing 146 n n C30 C39 BCR sing 147 n n C30 C40 BCR sing 148 n n C35 H351 BCR sing 149 n n C35 H352 BCR sing 150 n n C35 H353 BCR sing 151 n n C36 H361 BCR sing 152 n n C36 H362 BCR sing 153 n n C36 H363 BCR sing 154 n n C37 H371 BCR sing 155 n n C37 H372 BCR sing 156 n n C37 H373 BCR sing 157 n n C38 H381 BCR sing 158 n n C38 H382 BCR sing 159 n n C38 H383 BCR sing 160 n n C39 H391 BCR sing 161 n n C39 H392 BCR sing 162 n n C39 H393 BCR sing 163 n n C40 H401 BCR sing 164 n n C40 H402 BCR sing 165 n n C40 H403 BCR sing 166 n n # _atom_sites.entry_id 8R2I _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code L 12 FE2 A 1 401 402 FE2 FE2 . M 13 CLA A 1 402 405 CLA CLA . N 13 CLA A 1 403 407 CLA CLA . O 14 PHO A 1 404 408 PHO PHO . P 13 CLA A 1 405 410 CLA CLA . Q 15 BCR A 1 406 411 BCR BCR . R 16 BOG A 1 407 412 BOG BOG . S 13 CLA B 1 501 602 CLA CLA . T 13 CLA B 1 502 603 CLA CLA . U 13 CLA B 1 503 604 CLA CLA . V 13 CLA B 1 504 605 CLA CLA . W 13 CLA B 1 505 606 CLA CLA . X 13 CLA B 1 506 607 CLA CLA . Y 13 CLA B 1 507 608 CLA CLA . Z 13 CLA B 1 508 609 CLA CLA . AA 13 CLA B 1 509 610 CLA CLA . BA 13 CLA B 1 510 611 CLA CLA . CA 13 CLA B 1 511 612 CLA CLA . DA 13 CLA B 1 512 613 CLA CLA . EA 13 CLA B 1 513 614 CLA CLA . FA 13 CLA B 1 514 615 CLA CLA . GA 13 CLA B 1 515 616 CLA CLA . HA 13 CLA B 1 516 617 CLA CLA . IA 15 BCR B 1 517 619 BCR BCR . JA 15 BCR B 1 518 620 BCR BCR . KA 17 LMG B 1 519 622 LMG LMG . LA 18 LMT B 1 520 623 LMT LMT . MA 18 LMT B 1 521 624 LMT LMT . NA 19 LHG B 1 522 408 LHG LHG . OA 13 CLA C 1 501 501 CLA CLA . PA 13 CLA C 1 502 502 CLA CLA . QA 13 CLA C 1 503 503 CLA CLA . RA 13 CLA C 1 504 504 CLA CLA . SA 13 CLA C 1 505 505 CLA CLA . TA 13 CLA C 1 506 506 CLA CLA . UA 13 CLA C 1 507 507 CLA CLA . VA 13 CLA C 1 508 508 CLA CLA . WA 13 CLA C 1 509 509 CLA CLA . XA 13 CLA C 1 510 510 CLA CLA . YA 13 CLA C 1 511 511 CLA CLA . ZA 13 CLA C 1 512 512 CLA CLA . AB 13 CLA C 1 513 513 CLA CLA . BB 15 BCR C 1 514 514 BCR BCR . CB 15 BCR C 1 515 515 BCR BCR . DB 15 BCR C 1 516 517 BCR BCR . EB 20 DGD C 1 517 518 DGD DGD . FB 16 BOG C 1 518 519 BOG BOG . GB 13 CLA D 1 401 406 CLA CLA . HB 14 PHO D 1 402 409 PHO PHO . IB 21 BCT D 1 403 401 BCT BCT . JB 13 CLA D 1 404 402 CLA CLA . KB 13 CLA D 1 405 403 CLA CLA . LB 15 BCR D 1 406 404 BCR BCR . MB 22 PL9 D 1 407 405 PL9 PL9 . NB 16 BOG D 1 408 409 BOG BOG . OB 23 HEM E 1 101 101 HEM HEM . PB 15 BCR H 1 101 101 BCR BCR . QB 17 LMG H 1 102 102 LMG LMG . RB 24 HOH A 1 501 6002 HOH HOH . SB 24 HOH B 1 601 6002 HOH HOH . SB 24 HOH B 2 602 6001 HOH HOH . TB 24 HOH C 1 6001 6001 HOH HOH . UB 24 HOH D 1 6001 6001 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BCR . . . BB 15 158.082 179.166 106.937 1 41.7 ? C1 BCR 514 C 1 HETATM 2 C C2 BCR . . . BB 15 158.293 179.091 108.564 1 41.7 ? C2 BCR 514 C 1 HETATM 3 C C3 BCR . . . BB 15 157.745 180.156 109.208 1 41.7 ? C3 BCR 514 C 1 HETATM 4 C C4 BCR . . . BB 15 156.137 180.31 108.908 1 41.7 ? C4 BCR 514 C 1 HETATM 5 C C5 BCR . . . BB 15 155.835 180.325 107.5 1 41.7 ? C5 BCR 514 C 1 HETATM 6 C C6 BCR . . . BB 15 156.705 179.392 106.565 1 41.7 ? C6 BCR 514 C 1 HETATM 7 C C7 BCR . . . BB 15 156.057 178.626 105.396 1 41.7 ? C7 BCR 514 C 1 HETATM 8 C C8 BCR . . . BB 15 154.895 177.978 105.591 1 41.7 ? C8 BCR 514 C 1 HETATM 9 C C9 BCR . . . BB 15 154.209 177.188 104.416 1 41.7 ? C9 BCR 514 C 1 HETATM 10 C C10 BCR . . . BB 15 154.072 175.859 104.498 1 41.7 ? C10 BCR 514 C 1 HETATM 11 C C11 BCR . . . BB 15 153.394 175.069 103.356 1 41.7 ? C11 BCR 514 C 1 HETATM 12 C C33 BCR . . . BB 15 155.043 181.495 106.9 1 41.7 ? C33 BCR 514 C 1 HETATM 13 C C31 BCR . . . BB 15 158.551 177.859 106.327 1 41.7 ? C31 BCR 514 C 1 HETATM 14 C C32 BCR . . . BB 15 158.943 180.318 106.379 1 41.7 ? C32 BCR 514 C 1 HETATM 15 C C34 BCR . . . BB 15 153.687 177.954 103.158 1 41.7 ? C34 BCR 514 C 1 HETATM 16 C C12 BCR . . . BB 15 152.681 173.966 103.666 1 41.7 ? C12 BCR 514 C 1 HETATM 17 C C13 BCR . . . BB 15 151.955 173.111 102.556 1 41.7 ? C13 BCR 514 C 1 HETATM 18 C C14 BCR . . . BB 15 152.341 171.844 102.323 1 41.7 ? C14 BCR 514 C 1 HETATM 19 C C15 BCR . . . BB 15 151.619 170.974 101.221 1 41.7 ? C15 BCR 514 C 1 HETATM 20 C C16 BCR . . . BB 15 150.55 170.233 101.56 1 41.7 ? C16 BCR 514 C 1 HETATM 21 C C17 BCR . . . BB 15 149.823 169.37 100.502 1 41.7 ? C17 BCR 514 C 1 HETATM 22 C C18 BCR . . . BB 15 149.85 168.031 100.602 1 41.7 ? C18 BCR 514 C 1 HETATM 23 C C19 BCR . . . BB 15 149.123 167.149 99.548 1 41.7 ? C19 BCR 514 C 1 HETATM 24 C C20 BCR . . . BB 15 148.156 166.323 99.943 1 41.7 ? C20 BCR 514 C 1 HETATM 25 C C21 BCR . . . BB 15 147.407 165.42 98.912 1 41.7 ? C21 BCR 514 C 1 HETATM 26 C C22 BCR . . . BB 15 147.396 164.07 99.101 1 41.7 ? C22 BCR 514 C 1 HETATM 27 C C23 BCR . . . BB 15 146.652 163.127 98.092 1 41.7 ? C23 BCR 514 C 1 HETATM 28 C C24 BCR . . . BB 15 147.092 162.994 96.833 1 41.7 ? C24 BCR 514 C 1 HETATM 29 C C25 BCR . . . BB 15 146.334 162.04 95.837 1 41.7 ? C25 BCR 514 C 1 HETATM 30 C C26 BCR . . . BB 15 145.045 162.55 95.028 1 41.7 ? C26 BCR 514 C 1 HETATM 31 C C27 BCR . . . BB 15 144.946 162.176 93.64 1 41.7 ? C27 BCR 514 C 1 HETATM 32 C C28 BCR . . . BB 15 145.525 160.655 93.35 1 41.7 ? C28 BCR 514 C 1 HETATM 33 C C29 BCR . . . BB 15 146.791 160.476 93.837 1 41.7 ? C29 BCR 514 C 1 HETATM 34 C C30 BCR . . . BB 15 146.888 160.763 95.466 1 41.7 ? C30 BCR 514 C 1 HETATM 35 C C35 BCR . . . BB 15 150.804 173.737 101.745 1 41.7 ? C35 BCR 514 C 1 HETATM 36 C C36 BCR . . . BB 15 150.609 167.357 101.778 1 41.7 ? C36 BCR 514 C 1 HETATM 37 C C37 BCR . . . BB 15 148.126 163.464 100.322 1 41.7 ? C37 BCR 514 C 1 HETATM 38 C C38 BCR . . . BB 15 144.171 163.687 95.589 1 41.7 ? C38 BCR 514 C 1 HETATM 39 C C39 BCR . . . BB 15 148.32 160.711 95.873 1 41.7 ? C39 BCR 514 C 1 HETATM 40 C C40 BCR . . . BB 15 146.11 159.648 96.207 1 41.7 ? C40 BCR 514 C 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 40 #