data_8R2I
#
_model_server_result.job_id            7U3G_RsjOvFKwiR-I0qruw 
_model_server_result.datetime_utc      '2024-10-20 01:29:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8r2i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"MA","auth_seq_id":521}' 
#
_entry.id    8R2I 
#
_exptl.entry_id    8R2I 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              510.615 
_entity.id                          18 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DODECYL-BETA-D-MALTOSIDE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8R2I 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8R2I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    undecameric 
_pdbx_struct_assembly.oligomeric_count      11 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 18 LA N N 
? 18 MA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 L FE FE2 . A FE2 401 1_555 D NE2 HIS 212 D HIS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.791 ? 
metalc ? metalc2 L FE FE2 . A FE2 401 1_555 D NE2 HIS 266 D HIS 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.788 ? 
metalc ? metalc3 L FE FE2 . A FE2 401 1_555 IB O3 BCT . D BCT 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? 
metalc ? metalc4 N MG CLA . A CLA 403 1_555 RB O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc5 S MG CLA . B CLA 501 1_555 SB O HOH . B HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
metalc ? metalc6 BA MG CLA . B CLA 510 1_555 SB O HOH . B HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc7 C OD1 ASN 7 C ASN 27 1_555 YA MG CLA . C CLA 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? 
metalc ? metalc8 UA MG CLA . C CLA 507 1_555 TB O HOH . C HOH 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? 
metalc ? metalc9 GB MG CLA . D CLA 401 1_555 UB O HOH . D HOH 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
metalc ? metalc10 E NE2 HIS 17 E HIS 23 1_555 OB FE HEM . E HEM 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? 
metalc ? metalc11 OB FE HEM . E HEM 101 1_555 F NE2 HIS 12 F HIS 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? 
#
_chem_comp.formula           'C24 H46 O11' 
_chem_comp.formula_weight    510.615 
_chem_comp.id                LMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DODECYL-BETA-D-MALTOSIDE 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1B C2B LMT sing 997 n n 
C1B O1B LMT sing 998 n n 
C1B O5B LMT sing 999 n n 
C1B H1B LMT sing 1000 n n 
C2B C3B LMT sing 1001 n n 
C2B O2B LMT sing 1002 n n 
C2B H2B LMT sing 1003 n n 
C3B C4B LMT sing 1004 n n 
C3B O3B LMT sing 1005 n n 
C3B H3B LMT sing 1006 n n 
C4B C5B LMT sing 1007 n n 
C4B O4' LMT sing 1008 n n 
C4B H4B LMT sing 1009 n n 
C5B C6B LMT sing 1010 n n 
C5B O5B LMT sing 1011 n n 
C5B H5B LMT sing 1012 n n 
C6B O6B LMT sing 1013 n n 
C6B "H6'2" LMT sing 1014 n n 
C6B "H6'1" LMT sing 1015 n n 
O1B C4' LMT sing 1016 n n 
O2B H2O1 LMT sing 1017 n n 
O3B H3O1 LMT sing 1018 n n 
O4' H4O1 LMT sing 1019 n n 
O6B H6B LMT sing 1020 n n 
C1' C2' LMT sing 1021 n n 
C1' O1' LMT sing 1022 n n 
C1' O5' LMT sing 1023 n n 
C1' H1' LMT sing 1024 n n 
C2' C3' LMT sing 1025 n n 
C2' O2' LMT sing 1026 n n 
C2' H2' LMT sing 1027 n n 
C3' C4' LMT sing 1028 n n 
C3' O3' LMT sing 1029 n n 
C3' H3' LMT sing 1030 n n 
C4' C5' LMT sing 1031 n n 
C4' H4' LMT sing 1032 n n 
C5' C6' LMT sing 1033 n n 
C5' O5' LMT sing 1034 n n 
C5' H5' LMT sing 1035 n n 
C6' O6' LMT sing 1036 n n 
C6' H6D LMT sing 1037 n n 
C6' H6E LMT sing 1038 n n 
O1' C1 LMT sing 1039 n n 
O2' H2O2 LMT sing 1040 n n 
O3' H3O2 LMT sing 1041 n n 
O6' H6' LMT sing 1042 n n 
C1 C2 LMT sing 1043 n n 
C1 H12 LMT sing 1044 n n 
C1 H11 LMT sing 1045 n n 
C2 C3 LMT sing 1046 n n 
C2 H22 LMT sing 1047 n n 
C2 H21 LMT sing 1048 n n 
C3 C4 LMT sing 1049 n n 
C3 H32 LMT sing 1050 n n 
C3 H31 LMT sing 1051 n n 
C4 C5 LMT sing 1052 n n 
C4 H42 LMT sing 1053 n n 
C4 H41 LMT sing 1054 n n 
C5 C6 LMT sing 1055 n n 
C5 H52 LMT sing 1056 n n 
C5 H51 LMT sing 1057 n n 
C6 C7 LMT sing 1058 n n 
C6 H62 LMT sing 1059 n n 
C6 H61 LMT sing 1060 n n 
C7 C8 LMT sing 1061 n n 
C7 H72 LMT sing 1062 n n 
C7 H71 LMT sing 1063 n n 
C8 C9 LMT sing 1064 n n 
C8 H82 LMT sing 1065 n n 
C8 H81 LMT sing 1066 n n 
C9 C10 LMT sing 1067 n n 
C9 H92 LMT sing 1068 n n 
C9 H91 LMT sing 1069 n n 
C10 C11 LMT sing 1070 n n 
C10 H102 LMT sing 1071 n n 
C10 H101 LMT sing 1072 n n 
C11 C12 LMT sing 1073 n n 
C11 H112 LMT sing 1074 n n 
C11 H111 LMT sing 1075 n n 
C12 H123 LMT sing 1076 n n 
C12 H122 LMT sing 1077 n n 
C12 H121 LMT sing 1078 n n 
#
_atom_sites.entry_id                     8R2I 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
L 12 FE2 A 1 401 402 FE2 FE2 . 
M 13 CLA A 1 402 405 CLA CLA . 
N 13 CLA A 1 403 407 CLA CLA . 
O 14 PHO A 1 404 408 PHO PHO . 
P 13 CLA A 1 405 410 CLA CLA . 
Q 15 BCR A 1 406 411 BCR BCR . 
R 16 BOG A 1 407 412 BOG BOG . 
S 13 CLA B 1 501 602 CLA CLA . 
T 13 CLA B 1 502 603 CLA CLA . 
U 13 CLA B 1 503 604 CLA CLA . 
V 13 CLA B 1 504 605 CLA CLA . 
W 13 CLA B 1 505 606 CLA CLA . 
X 13 CLA B 1 506 607 CLA CLA . 
Y 13 CLA B 1 507 608 CLA CLA . 
Z 13 CLA B 1 508 609 CLA CLA . 
AA 13 CLA B 1 509 610 CLA CLA . 
BA 13 CLA B 1 510 611 CLA CLA . 
CA 13 CLA B 1 511 612 CLA CLA . 
DA 13 CLA B 1 512 613 CLA CLA . 
EA 13 CLA B 1 513 614 CLA CLA . 
FA 13 CLA B 1 514 615 CLA CLA . 
GA 13 CLA B 1 515 616 CLA CLA . 
HA 13 CLA B 1 516 617 CLA CLA . 
IA 15 BCR B 1 517 619 BCR BCR . 
JA 15 BCR B 1 518 620 BCR BCR . 
KA 17 LMG B 1 519 622 LMG LMG . 
LA 18 LMT B 1 520 623 LMT LMT . 
MA 18 LMT B 1 521 624 LMT LMT . 
NA 19 LHG B 1 522 408 LHG LHG . 
OA 13 CLA C 1 501 501 CLA CLA . 
PA 13 CLA C 1 502 502 CLA CLA . 
QA 13 CLA C 1 503 503 CLA CLA . 
RA 13 CLA C 1 504 504 CLA CLA . 
SA 13 CLA C 1 505 505 CLA CLA . 
TA 13 CLA C 1 506 506 CLA CLA . 
UA 13 CLA C 1 507 507 CLA CLA . 
VA 13 CLA C 1 508 508 CLA CLA . 
WA 13 CLA C 1 509 509 CLA CLA . 
XA 13 CLA C 1 510 510 CLA CLA . 
YA 13 CLA C 1 511 511 CLA CLA . 
ZA 13 CLA C 1 512 512 CLA CLA . 
AB 13 CLA C 1 513 513 CLA CLA . 
BB 15 BCR C 1 514 514 BCR BCR . 
CB 15 BCR C 1 515 515 BCR BCR . 
DB 15 BCR C 1 516 517 BCR BCR . 
EB 20 DGD C 1 517 518 DGD DGD . 
FB 16 BOG C 1 518 519 BOG BOG . 
GB 13 CLA D 1 401 406 CLA CLA . 
HB 14 PHO D 1 402 409 PHO PHO . 
IB 21 BCT D 1 403 401 BCT BCT . 
JB 13 CLA D 1 404 402 CLA CLA . 
KB 13 CLA D 1 405 403 CLA CLA . 
LB 15 BCR D 1 406 404 BCR BCR . 
MB 22 PL9 D 1 407 405 PL9 PL9 . 
NB 16 BOG D 1 408 409 BOG BOG . 
OB 23 HEM E 1 101 101 HEM HEM . 
PB 15 BCR H 1 101 101 BCR BCR . 
QB 17 LMG H 1 102 102 LMG LMG . 
RB 24 HOH A 1 501 6002 HOH HOH . 
SB 24 HOH B 1 601 6002 HOH HOH . 
SB 24 HOH B 2 602 6001 HOH HOH . 
TB 24 HOH C 1 6001 6001 HOH HOH . 
UB 24 HOH D 1 6001 6001 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1B LMT . . . MA 18 130.359 114.282 202.99 1 20 ? C1B LMT 521 B 1 
HETATM 2 C C2B LMT . . . MA 18 129.863 113.041 203.724 1 20 ? C2B LMT 521 B 1 
HETATM 3 C C3B LMT . . . MA 18 129.085 113.388 204.943 1 20 ? C3B LMT 521 B 1 
HETATM 4 C C4B LMT . . . MA 18 127.907 114.261 204.643 1 20 ? C4B LMT 521 B 1 
HETATM 5 C C5B LMT . . . MA 18 128.252 115.383 203.66 1 20 ? C5B LMT 521 B 1 
HETATM 6 C C6B LMT . . . MA 18 127.681 116.67 204.165 1 20 ? C6B LMT 521 B 1 
HETATM 7 O O1B LMT . . . MA 18 130.093 114.145 201.655 1 20 ? O1B LMT 521 B 1 
HETATM 8 O O2B LMT . . . MA 18 129.023 112.276 202.833 1 20 ? O2B LMT 521 B 1 
HETATM 9 O O3B LMT . . . MA 18 129.96 114.085 205.872 1 20 ? O3B LMT 521 B 1 
HETATM 10 O O4' LMT . . . MA 18 126.867 113.457 204.084 1 20 ? O4' LMT 521 B 1 
HETATM 11 O O5B LMT . . . MA 18 129.708 115.536 203.494 1 20 ? O5B LMT 521 B 1 
HETATM 12 O O6B LMT . . . MA 18 126.286 116.614 204.109 1 20 ? O6B LMT 521 B 1 
HETATM 13 C C1' LMT . . . MA 18 129.839 114.899 198.239 1 20 ? C1' LMT 521 B 1 
HETATM 14 C C2' LMT . . . MA 18 130.721 113.771 198.763 1 20 ? C2' LMT 521 B 1 
HETATM 15 C C3' LMT . . . MA 18 131.645 114.227 199.84 1 20 ? C3' LMT 521 B 1 
HETATM 16 C C4' LMT . . . MA 18 130.957 115.018 200.902 1 20 ? C4' LMT 521 B 1 
HETATM 17 C C5' LMT . . . MA 18 130.123 116.164 200.327 1 20 ? C5' LMT 521 B 1 
HETATM 18 C C6' LMT . . . MA 18 130.627 117.452 200.879 1 20 ? C6' LMT 521 B 1 
HETATM 19 O O1' LMT . . . MA 18 129.985 114.988 196.875 1 20 ? O1' LMT 521 B 1 
HETATM 20 O O2' LMT . . . MA 18 129.881 112.726 199.283 1 20 ? O2' LMT 521 B 1 
HETATM 21 O O3' LMT . . . MA 18 132.684 115.046 199.246 1 20 ? O3' LMT 521 B 1 
HETATM 22 O O5' LMT . . . MA 18 130.19 116.214 198.852 1 20 ? O5' LMT 521 B 1 
HETATM 23 O O6' LMT . . . MA 18 129.637 118.031 201.678 1 20 ? O6' LMT 521 B 1 
HETATM 24 C C1 LMT . . . MA 18 128.855 114.508 196.146 1 20 ? C1 LMT 521 B 1 
HETATM 25 C C2 LMT . . . MA 18 127.88 115.677 195.861 1 20 ? C2 LMT 521 B 1 
HETATM 26 C C3 LMT . . . MA 18 128.424 116.527 194.684 1 20 ? C3 LMT 521 B 1 
HETATM 27 C C4 LMT . . . MA 18 128.508 115.648 193.408 1 20 ? C4 LMT 521 B 1 
HETATM 28 C C5 LMT . . . MA 18 128.231 116.516 192.146 1 20 ? C5 LMT 521 B 1 
HETATM 29 C C6 LMT . . . MA 18 126.942 117.362 192.362 1 20 ? C6 LMT 521 B 1 
HETATM 30 C C7 LMT . . . MA 18 126.805 118.393 191.22 1 20 ? C7 LMT 521 B 1 
HETATM 31 C C8 LMT . . . MA 18 125.984 117.787 190.058 1 20 ? C8 LMT 521 B 1 
HETATM 32 C C9 LMT . . . MA 18 124.603 118.469 190.006 1 20 ? C9 LMT 521 B 1 
HETATM 33 C C10 LMT . . . MA 18 124.162 118.625 188.536 1 20 ? C10 LMT 521 B 1 
HETATM 34 C C11 LMT . . . MA 18 122.622 118.719 188.47 1 20 ? C11 LMT 521 B 1 
HETATM 35 C C12 LMT . . . MA 18 122.019 117.309 188.503 1 20 ? C12 LMT 521 B 1 
#
_model_server_stats.io_time_ms              44 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           256 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           35 
#