data_8R2S # _model_server_result.job_id siJxZvoMc7NkXVEyFsBGIw _model_server_result.datetime_utc '2024-12-21 14:44:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8r2s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 8R2S # _exptl.entry_id 8R2S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 117.148 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description INDOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8R2S _cell.length_a 51.61 _cell.length_b 74.834 _cell.length_c 156.906 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8R2S _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H7 N' _chem_comp.formula_weight 117.148 _chem_comp.id IND _chem_comp.mon_nstd_flag . _chem_comp.name INDOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IND sing 259 n y N1 C8 IND sing 260 n y N1 HN1 IND sing 261 n n C2 C3 IND doub 262 n y C2 H2 IND sing 263 n n C3 C9 IND sing 264 n y C3 H3 IND sing 265 n n C4 C5 IND doub 266 n y C4 C9 IND sing 267 n y C4 H4 IND sing 268 n n C5 C6 IND sing 269 n y C5 H5 IND sing 270 n n C6 C7 IND doub 271 n y C6 H6 IND sing 272 n n C7 C8 IND sing 273 n y C7 H7 IND sing 274 n n C8 C9 IND doub 275 n y # _atom_sites.entry_id 8R2S _atom_sites.fract_transf_matrix[1][1] 0.019376 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013363 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006373 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 401 401 HEM HEM . D 3 IND A 1 402 402 IND IND . E 4 PEG A 1 403 404 PEG PEG . F 4 PEG A 1 404 405 PEG PEG . G 5 ACT A 1 405 407 ACT ACT . H 4 PEG A 1 406 408 PEG PEG . I 4 PEG B 1 401 406 PEG PEG . J 4 PEG B 1 402 401 PEG PEG . K 4 PEG B 1 403 402 PEG PEG . L 4 PEG B 1 404 403 PEG PEG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IND . . . D 3 59.564 11.422 20.668 1 82.42 ? N1 IND 402 A 1 HETATM 2 C C2 IND . . . D 3 59.907 10.305 19.949 1 85.82 ? C2 IND 402 A 1 HETATM 3 C C3 IND . . . D 3 58.794 9.736 19.421 1 82.92 ? C3 IND 402 A 1 HETATM 4 C C4 IND . . . D 3 56.292 10.49 19.639 1 76.9 ? C4 IND 402 A 1 HETATM 5 C C5 IND . . . D 3 55.486 11.45 20.208 1 69.81 ? C5 IND 402 A 1 HETATM 6 C C6 IND . . . D 3 56.028 12.482 20.961 1 68.48 ? C6 IND 402 A 1 HETATM 7 C C7 IND . . . D 3 57.385 12.569 21.184 1 73.46 ? C7 IND 402 A 1 HETATM 8 C C8 IND . . . D 3 58.202 11.592 20.619 1 75.25 ? C8 IND 402 A 1 HETATM 9 C C9 IND . . . D 3 57.679 10.538 19.838 1 79.52 ? C9 IND 402 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 9 #