data_8R5E # _model_server_result.job_id njAFSvXuwVvVZyBunfAacg _model_server_result.datetime_utc '2024-11-28 21:48:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8r5e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 8R5E # _exptl.entry_id 8R5E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8R5E _cell.length_a 65.341 _cell.length_b 75.249 _cell.length_c 82.869 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8R5E _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 165 A CYS 163 1_555 D C3 Y6K . A Y6K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.807 ? metalc ? metalc1 A OD1 ASN 158 A ASN 156 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc2 B MG MG . A MG 401 1_555 C O2A ANP . A ANP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc3 B MG MG . A MG 401 1_555 C O1G ANP . A ANP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc4 B MG MG . A MG 401 1_555 F O HOH . A HOH 539 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc5 B MG MG . A MG 401 1_555 F O HOH . A HOH 599 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.916 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8R5E _atom_sites.fract_transf_matrix[1][1] 0.015304 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013289 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012067 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 401 405 MG MG . C 3 ANP A 1 402 407 ANP ANP . D 4 Y6K A 1 403 408 Y6K R77 . E 5 GOL A 1 404 409 GOL GOL . F 6 HOH A 1 501 72 HOH HOH . F 6 HOH A 2 502 71 HOH HOH . F 6 HOH A 3 503 73 HOH HOH . F 6 HOH A 4 504 89 HOH HOH . F 6 HOH A 5 505 53 HOH HOH . F 6 HOH A 6 506 47 HOH HOH . F 6 HOH A 7 507 110 HOH HOH . F 6 HOH A 8 508 75 HOH HOH . F 6 HOH A 9 509 97 HOH HOH . F 6 HOH A 10 510 66 HOH HOH . F 6 HOH A 11 511 105 HOH HOH . F 6 HOH A 12 512 90 HOH HOH . F 6 HOH A 13 513 82 HOH HOH . F 6 HOH A 14 514 77 HOH HOH . F 6 HOH A 15 515 126 HOH HOH . F 6 HOH A 16 516 79 HOH HOH . F 6 HOH A 17 517 85 HOH HOH . F 6 HOH A 18 518 27 HOH HOH . F 6 HOH A 19 519 95 HOH HOH . F 6 HOH A 20 520 128 HOH HOH . F 6 HOH A 21 521 112 HOH HOH . F 6 HOH A 22 522 40 HOH HOH . F 6 HOH A 23 523 50 HOH HOH . F 6 HOH A 24 524 33 HOH HOH . F 6 HOH A 25 525 86 HOH HOH . F 6 HOH A 26 526 31 HOH HOH . F 6 HOH A 27 527 39 HOH HOH . F 6 HOH A 28 528 102 HOH HOH . F 6 HOH A 29 529 4 HOH HOH . F 6 HOH A 30 530 117 HOH HOH . F 6 HOH A 31 531 123 HOH HOH . F 6 HOH A 32 532 92 HOH HOH . F 6 HOH A 33 533 6 HOH HOH . F 6 HOH A 34 534 113 HOH HOH . F 6 HOH A 35 535 51 HOH HOH . F 6 HOH A 36 536 23 HOH HOH . F 6 HOH A 37 537 30 HOH HOH . F 6 HOH A 38 538 119 HOH HOH . F 6 HOH A 39 539 70 HOH HOH . F 6 HOH A 40 540 36 HOH HOH . F 6 HOH A 41 541 84 HOH HOH . F 6 HOH A 42 542 131 HOH HOH . F 6 HOH A 43 543 120 HOH HOH . F 6 HOH A 44 544 58 HOH HOH . F 6 HOH A 45 545 15 HOH HOH . F 6 HOH A 46 546 122 HOH HOH . F 6 HOH A 47 547 65 HOH HOH . F 6 HOH A 48 548 68 HOH HOH . F 6 HOH A 49 549 60 HOH HOH . F 6 HOH A 50 550 20 HOH HOH . F 6 HOH A 51 551 9 HOH HOH . F 6 HOH A 52 552 7 HOH HOH . F 6 HOH A 53 553 18 HOH HOH . F 6 HOH A 54 554 55 HOH HOH . F 6 HOH A 55 555 67 HOH HOH . F 6 HOH A 56 556 28 HOH HOH . F 6 HOH A 57 557 106 HOH HOH . F 6 HOH A 58 558 29 HOH HOH . F 6 HOH A 59 559 21 HOH HOH . F 6 HOH A 60 560 35 HOH HOH . F 6 HOH A 61 561 5 HOH HOH . F 6 HOH A 62 562 49 HOH HOH . F 6 HOH A 63 563 12 HOH HOH . F 6 HOH A 64 564 11 HOH HOH . F 6 HOH A 65 565 17 HOH HOH . F 6 HOH A 66 566 37 HOH HOH . F 6 HOH A 67 567 62 HOH HOH . F 6 HOH A 68 568 109 HOH HOH . F 6 HOH A 69 569 1 HOH HOH . F 6 HOH A 70 570 8 HOH HOH . F 6 HOH A 71 571 103 HOH HOH . F 6 HOH A 72 572 45 HOH HOH . F 6 HOH A 73 573 16 HOH HOH . F 6 HOH A 74 574 125 HOH HOH . F 6 HOH A 75 575 42 HOH HOH . F 6 HOH A 76 576 26 HOH HOH . F 6 HOH A 77 577 116 HOH HOH . F 6 HOH A 78 578 38 HOH HOH . F 6 HOH A 79 579 44 HOH HOH . F 6 HOH A 80 580 80 HOH HOH . F 6 HOH A 81 581 124 HOH HOH . F 6 HOH A 82 582 10 HOH HOH . F 6 HOH A 83 583 87 HOH HOH . F 6 HOH A 84 584 64 HOH HOH . F 6 HOH A 85 585 3 HOH HOH . F 6 HOH A 86 586 13 HOH HOH . F 6 HOH A 87 587 2 HOH HOH . F 6 HOH A 88 588 115 HOH HOH . F 6 HOH A 89 589 88 HOH HOH . F 6 HOH A 90 590 25 HOH HOH . F 6 HOH A 91 591 94 HOH HOH . F 6 HOH A 92 592 81 HOH HOH . F 6 HOH A 93 593 54 HOH HOH . F 6 HOH A 94 594 63 HOH HOH . F 6 HOH A 95 595 41 HOH HOH . F 6 HOH A 96 596 101 HOH HOH . F 6 HOH A 97 597 14 HOH HOH . F 6 HOH A 98 598 76 HOH HOH . F 6 HOH A 99 599 111 HOH HOH . F 6 HOH A 100 600 59 HOH HOH . F 6 HOH A 101 601 24 HOH HOH . F 6 HOH A 102 602 46 HOH HOH . F 6 HOH A 103 603 132 HOH HOH . F 6 HOH A 104 604 61 HOH HOH . F 6 HOH A 105 605 34 HOH HOH . F 6 HOH A 106 606 121 HOH HOH . F 6 HOH A 107 607 107 HOH HOH . F 6 HOH A 108 608 19 HOH HOH . F 6 HOH A 109 609 129 HOH HOH . F 6 HOH A 110 610 52 HOH HOH . F 6 HOH A 111 611 57 HOH HOH . F 6 HOH A 112 612 56 HOH HOH . F 6 HOH A 113 613 69 HOH HOH . F 6 HOH A 114 614 32 HOH HOH . F 6 HOH A 115 615 22 HOH HOH . F 6 HOH A 116 616 104 HOH HOH . F 6 HOH A 117 617 91 HOH HOH . F 6 HOH A 118 618 99 HOH HOH . F 6 HOH A 119 619 43 HOH HOH . F 6 HOH A 120 620 48 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 7.663 _atom_site.Cartn_y 6.671 _atom_site.Cartn_z 13.112 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 62.43 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #