data_8R5R # _model_server_result.job_id pywiO_1vTKefM4GjnI1XbA _model_server_result.datetime_utc '2024-12-02 09:10:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8r5r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 8R5R # _exptl.entry_id 8R5R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 343.25 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-chloranyl-~{N}-[(1~{S})-1-(6-chloranylpyridin-3-yl)-2-phenyl-ethyl]aniline _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8R5R _cell.length_a 91.738 _cell.length_b 132.906 _cell.length_c 137.495 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8R5R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # _chem_comp.formula 'C19 H16 Cl2 N2' _chem_comp.formula_weight 343.25 _chem_comp.id Y5N _chem_comp.mon_nstd_flag . _chem_comp.name 3-chloranyl-~{N}-[(1~{S})-1-(6-chloranylpyridin-3-yl)-2-phenyl-ethyl]aniline _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 CL1 Y5N sing 376 n n C2 C1 Y5N doub 377 n y C3 C2 Y5N sing 378 n y C3 C4 Y5N doub 379 n y C4 C5 Y5N sing 380 n y C5 N Y5N sing 381 n n CA N Y5N sing 382 n n C CA Y5N sing 383 n n C C8 Y5N sing 384 n n C9 C8 Y5N doub 385 n y C10 C9 Y5N sing 386 n y C11 C10 Y5N doub 387 n y C12 C11 Y5N sing 388 n y C12 C13 Y5N doub 389 n y CB CA Y5N sing 390 n n CG CB Y5N doub 391 n y CD CG Y5N sing 392 n y C17 CB Y5N sing 393 n y C17 NZ Y5N doub 394 n y CE NZ Y5N sing 395 n y CE CL2 Y5N sing 396 n n C19 C5 Y5N doub 397 n y C19 C1 Y5N sing 398 n y C13 C8 Y5N sing 399 n y CD CE Y5N doub 400 n y C4 H3 Y5N sing 401 n n C10 H9 Y5N sing 402 n n C13 H12 Y5N sing 403 n n C17 H15 Y5N sing 404 n n C2 H1 Y5N sing 405 n n C3 H2 Y5N sing 406 n n N H4 Y5N sing 407 n n CA H5 Y5N sing 408 n n C H6 Y5N sing 409 n n C H7 Y5N sing 410 n n C9 H8 Y5N sing 411 n n C11 H10 Y5N sing 412 n n C12 H11 Y5N sing 413 n n CG H13 Y5N sing 414 n n CD H14 Y5N sing 415 n n C19 H16 Y5N sing 416 n n # _atom_sites.entry_id 8R5R _atom_sites.fract_transf_matrix[1][1] 0.010901 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007524 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007273 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 Y5N A 1 501 501 Y5N LIG . F 3 ZIQ A 1 502 1 ZIQ LI2 . G 2 Y5N B 1 501 501 Y5N LIG . H 3 ZIQ B 1 502 2 ZIQ LI2 . I 2 Y5N C 1 501 501 Y5N LIG . J 3 ZIQ C 1 502 3 ZIQ LI2 . K 2 Y5N D 1 501 501 Y5N LIG . L 3 ZIQ D 1 502 4 ZIQ LI2 . M 4 HOH A 1 601 10 HOH HOH . M 4 HOH A 2 602 7 HOH HOH . M 4 HOH A 3 603 6 HOH HOH . N 4 HOH B 1 601 9 HOH HOH . N 4 HOH B 2 602 5 HOH HOH . N 4 HOH B 3 603 8 HOH HOH . N 4 HOH B 4 604 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 Y5N . . . E 2 -30.58 23.137 -24.597 1 76.88 ? C4 Y5N 501 A 1 HETATM 2 C C5 Y5N . . . E 2 -29.648 22.114 -24.453 1 76.26 ? C5 Y5N 501 A 1 HETATM 3 C C8 Y5N . . . E 2 -29.383 18.387 -26.46 1 73.03 ? C8 Y5N 501 A 1 HETATM 4 C C10 Y5N . . . E 2 -31.634 17.568 -26.637 1 72.72 ? C10 Y5N 501 A 1 HETATM 5 C C13 Y5N . . . E 2 -29.044 17.213 -25.798 1 72.92 ? C13 Y5N 501 A 1 HETATM 6 C C17 Y5N . . . E 2 -26.548 22.225 -26.216 1 72.48 ? C17 Y5N 501 A 1 HETATM 7 CL CL1 Y5N . . . E 2 -28.909 22.232 -20.551 1 79.01 ? CL1 Y5N 501 A 1 HETATM 8 C C1 Y5N . . . E 2 -29.552 22.584 -22.122 1 77.8 ? C1 Y5N 501 A 1 HETATM 9 C C2 Y5N . . . E 2 -30.474 23.595 -22.253 1 77.42 ? C2 Y5N 501 A 1 HETATM 10 C C3 Y5N . . . E 2 -30.996 23.863 -23.496 1 77.14 ? C3 Y5N 501 A 1 HETATM 11 N N Y5N . . . E 2 -29.239 21.384 -25.575 1 74.91 ? N Y5N 501 A 1 HETATM 12 C CA Y5N . . . E 2 -28.168 20.402 -25.543 1 73.6 ? CA Y5N 501 A 1 HETATM 13 C C Y5N . . . E 2 -28.353 19.445 -26.724 1 73.23 ? C Y5N 501 A 1 HETATM 14 C C9 Y5N . . . E 2 -30.692 18.555 -26.872 1 72.88 ? C9 Y5N 501 A 1 HETATM 15 C C11 Y5N . . . E 2 -31.282 16.415 -25.973 1 72.59 ? C11 Y5N 501 A 1 HETATM 16 C C12 Y5N . . . E 2 -29.99 16.227 -25.568 1 72.68 ? C12 Y5N 501 A 1 HETATM 17 C CB Y5N . . . E 2 -26.781 21.005 -25.603 1 72.88 ? CB Y5N 501 A 1 HETATM 18 C CG Y5N . . . E 2 -25.681 20.356 -25.074 1 72.6 ? CG Y5N 501 A 1 HETATM 19 C CD Y5N . . . E 2 -24.424 20.919 -25.157 1 72.24 ? CD Y5N 501 A 1 HETATM 20 N NZ Y5N . . . E 2 -25.341 22.8 -26.317 1 72.08 ? NZ Y5N 501 A 1 HETATM 21 C CE Y5N . . . E 2 -24.327 22.129 -25.792 1 71.97 ? CE Y5N 501 A 1 HETATM 22 CL CL2 Y5N . . . E 2 -22.76 22.864 -25.94 1 71.72 ? CL2 Y5N 501 A 1 HETATM 23 C C19 Y5N . . . E 2 -29.123 21.84 -23.198 1 76.93 ? C19 Y5N 501 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 368 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 23 #