data_8R5R # _model_server_result.job_id Rc4cfL-X1pwT5aQulB5MKQ _model_server_result.datetime_utc '2024-11-30 05:46:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8r5r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":501}' # _entry.id 8R5R # _exptl.entry_id 8R5R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 343.25 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-chloranyl-~{N}-[(1~{S})-1-(6-chloranylpyridin-3-yl)-2-phenyl-ethyl]aniline _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8R5R _cell.length_a 91.738 _cell.length_b 132.906 _cell.length_c 137.495 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8R5R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # _chem_comp.formula 'C19 H16 Cl2 N2' _chem_comp.formula_weight 343.25 _chem_comp.id Y5N _chem_comp.mon_nstd_flag . _chem_comp.name 3-chloranyl-~{N}-[(1~{S})-1-(6-chloranylpyridin-3-yl)-2-phenyl-ethyl]aniline _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 CL1 Y5N sing 376 n n C2 C1 Y5N doub 377 n y C3 C2 Y5N sing 378 n y C3 C4 Y5N doub 379 n y C4 C5 Y5N sing 380 n y C5 N Y5N sing 381 n n CA N Y5N sing 382 n n C CA Y5N sing 383 n n C C8 Y5N sing 384 n n C9 C8 Y5N doub 385 n y C10 C9 Y5N sing 386 n y C11 C10 Y5N doub 387 n y C12 C11 Y5N sing 388 n y C12 C13 Y5N doub 389 n y CB CA Y5N sing 390 n n CG CB Y5N doub 391 n y CD CG Y5N sing 392 n y C17 CB Y5N sing 393 n y C17 NZ Y5N doub 394 n y CE NZ Y5N sing 395 n y CE CL2 Y5N sing 396 n n C19 C5 Y5N doub 397 n y C19 C1 Y5N sing 398 n y C13 C8 Y5N sing 399 n y CD CE Y5N doub 400 n y C4 H3 Y5N sing 401 n n C10 H9 Y5N sing 402 n n C13 H12 Y5N sing 403 n n C17 H15 Y5N sing 404 n n C2 H1 Y5N sing 405 n n C3 H2 Y5N sing 406 n n N H4 Y5N sing 407 n n CA H5 Y5N sing 408 n n C H6 Y5N sing 409 n n C H7 Y5N sing 410 n n C9 H8 Y5N sing 411 n n C11 H10 Y5N sing 412 n n C12 H11 Y5N sing 413 n n CG H13 Y5N sing 414 n n CD H14 Y5N sing 415 n n C19 H16 Y5N sing 416 n n # _atom_sites.entry_id 8R5R _atom_sites.fract_transf_matrix[1][1] 0.010901 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007524 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007273 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 Y5N A 1 501 501 Y5N LIG . F 3 ZIQ A 1 502 1 ZIQ LI2 . G 2 Y5N B 1 501 501 Y5N LIG . H 3 ZIQ B 1 502 2 ZIQ LI2 . I 2 Y5N C 1 501 501 Y5N LIG . J 3 ZIQ C 1 502 3 ZIQ LI2 . K 2 Y5N D 1 501 501 Y5N LIG . L 3 ZIQ D 1 502 4 ZIQ LI2 . M 4 HOH A 1 601 10 HOH HOH . M 4 HOH A 2 602 7 HOH HOH . M 4 HOH A 3 603 6 HOH HOH . N 4 HOH B 1 601 9 HOH HOH . N 4 HOH B 2 602 5 HOH HOH . N 4 HOH B 3 603 8 HOH HOH . N 4 HOH B 4 604 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 Y5N . . . G 2 -9.487 19.368 1.529 1 80.34 ? C4 Y5N 501 B 1 HETATM 2 C C5 Y5N . . . G 2 -9.621 18.469 0.474 1 79.78 ? C5 Y5N 501 B 1 HETATM 3 C C8 Y5N . . . G 2 -7.002 15.361 -0.773 1 75.69 ? C8 Y5N 501 B 1 HETATM 4 C C10 Y5N . . . G 2 -5.547 15.531 -2.666 1 75.55 ? C10 Y5N 501 B 1 HETATM 5 C C13 Y5N . . . G 2 -5.995 15.875 0.017 1 75.55 ? C13 Y5N 501 B 1 HETATM 6 C C17 Y5N . . . G 2 -11.444 15.428 0.877 1 75.9 ? C17 Y5N 501 B 1 HETATM 7 CL CL1 Y5N . . . G 2 -11.411 20.698 -2.297 1 81.98 ? CL1 Y5N 501 B 1 HETATM 8 C C1 Y5N . . . G 2 -10.645 20.19 -0.819 1 81.22 ? C1 Y5N 501 B 1 HETATM 9 C C2 Y5N . . . G 2 -10.523 21.087 0.22 1 80.93 ? C2 Y5N 501 B 1 HETATM 10 C C3 Y5N . . . G 2 -9.934 20.672 1.396 1 80.61 ? C3 Y5N 501 B 1 HETATM 11 N N Y5N . . . G 2 -9.163 17.152 0.62 1 78.33 ? N Y5N 501 B 1 HETATM 12 C CA Y5N . . . G 2 -9.371 16.118 -0.378 1 76.92 ? CA Y5N 501 B 1 HETATM 13 C C Y5N . . . G 2 -8.325 15.013 -0.182 1 76.25 ? C Y5N 501 B 1 HETATM 14 C C9 Y5N . . . G 2 -6.768 15.198 -2.119 1 75.53 ? C9 Y5N 501 B 1 HETATM 15 C C11 Y5N . . . G 2 -4.553 16.031 -1.87 1 75.56 ? C11 Y5N 501 B 1 HETATM 16 C C12 Y5N . . . G 2 -4.775 16.208 -0.529 1 75.5 ? C12 Y5N 501 B 1 HETATM 17 C CB Y5N . . . G 2 -10.743 15.498 -0.311 1 76.36 ? CB Y5N 501 B 1 HETATM 18 C CG Y5N . . . G 2 -11.33 14.923 -1.417 1 76.28 ? CG Y5N 501 B 1 HETATM 19 C CD Y5N . . . G 2 -12.568 14.337 -1.325 1 75.92 ? CD Y5N 501 B 1 HETATM 20 N NZ Y5N . . . G 2 -12.639 14.85 1.003 1 75.66 ? NZ Y5N 501 B 1 HETATM 21 C CE Y5N . . . G 2 -13.155 14.33 -0.096 1 75.67 ? CE Y5N 501 B 1 HETATM 22 CL CL2 Y5N . . . G 2 -14.698 13.58 0.068 1 75.76 ? CL2 Y5N 501 B 1 HETATM 23 C C19 Y5N . . . G 2 -10.207 18.887 -0.714 1 80.55 ? C19 Y5N 501 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 23 #