data_8R5R # _model_server_result.job_id jCOJ0R4uLLOYmcsj1fYlig _model_server_result.datetime_utc '2024-11-30 05:35:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8r5r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":502}' # _entry.id 8R5R # _exptl.entry_id 8R5R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 218.252 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description alpha-methyl-L-tryptophan _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8R5R _cell.length_a 91.738 _cell.length_b 132.906 _cell.length_c 137.495 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8R5R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # _chem_comp.formula 'C12 H14 N2 O2' _chem_comp.formula_weight 218.252 _chem_comp.id ZIQ _chem_comp.mon_nstd_flag n _chem_comp.name alpha-methyl-L-tryptophan _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 CA ZIQ sing 417 n n O C ZIQ doub 418 n n CA C ZIQ sing 419 n n CA N ZIQ sing 420 n n CA CB ZIQ sing 421 n n C OXT ZIQ sing 422 n n CB CG ZIQ sing 423 n n CG CD1 ZIQ doub 424 n y CG CD2 ZIQ sing 425 n y CD1 NE1 ZIQ sing 426 n y CE3 CD2 ZIQ doub 427 n y CE3 CZ3 ZIQ sing 428 n y CD2 CE2 ZIQ sing 429 n y NE1 CE2 ZIQ sing 430 n y CZ3 CH2 ZIQ doub 431 n y CE2 CZ2 ZIQ doub 432 n y CH2 CZ2 ZIQ sing 433 n y N H ZIQ sing 434 n n N H2 ZIQ sing 435 n n CB H4 ZIQ sing 436 n n CB H5 ZIQ sing 437 n n CE3 H6 ZIQ sing 438 n n CZ3 H7 ZIQ sing 439 n n CH2 H8 ZIQ sing 440 n n CZ2 H9 ZIQ sing 441 n n NE1 H10 ZIQ sing 442 n n CD1 H11 ZIQ sing 443 n n C1 H12 ZIQ sing 444 n n C1 H13 ZIQ sing 445 n n C1 H14 ZIQ sing 446 n n OXT HXT ZIQ sing 447 n n # _atom_sites.entry_id 8R5R _atom_sites.fract_transf_matrix[1][1] 0.010901 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007524 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007273 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 Y5N A 1 501 501 Y5N LIG . F 3 ZIQ A 1 502 1 ZIQ LI2 . G 2 Y5N B 1 501 501 Y5N LIG . H 3 ZIQ B 1 502 2 ZIQ LI2 . I 2 Y5N C 1 501 501 Y5N LIG . J 3 ZIQ C 1 502 3 ZIQ LI2 . K 2 Y5N D 1 501 501 Y5N LIG . L 3 ZIQ D 1 502 4 ZIQ LI2 . M 4 HOH A 1 601 10 HOH HOH . M 4 HOH A 2 602 7 HOH HOH . M 4 HOH A 3 603 6 HOH HOH . N 4 HOH B 1 601 9 HOH HOH . N 4 HOH B 2 602 5 HOH HOH . N 4 HOH B 3 603 8 HOH HOH . N 4 HOH B 4 604 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N ZIQ . . . F 3 12.207 28.329 -28.628 1 93.25 ? N ZIQ 502 A 1 HETATM 2 C CA ZIQ . . . F 3 12.981 28.995 -29.713 1 93.17 ? CA ZIQ 502 A 1 HETATM 3 C CB ZIQ . . . F 3 13.359 27.998 -30.816 1 93.1 ? CB ZIQ 502 A 1 HETATM 4 C CG ZIQ . . . F 3 12.177 27.202 -31.362 1 92.99 ? CG ZIQ 502 A 1 HETATM 5 C CD2 ZIQ . . . F 3 12.062 25.822 -31.341 1 92.93 ? CD2 ZIQ 502 A 1 HETATM 6 C CE3 ZIQ . . . F 3 12.924 24.867 -30.806 1 92.98 ? CE3 ZIQ 502 A 1 HETATM 7 C CZ3 ZIQ . . . F 3 12.575 23.524 -30.878 1 92.85 ? CZ3 ZIQ 502 A 1 HETATM 8 C CH2 ZIQ . . . F 3 11.392 23.162 -31.505 1 92.71 ? CH2 ZIQ 502 A 1 HETATM 9 C CZ2 ZIQ . . . F 3 10.532 24.129 -32.006 1 92.67 ? CZ2 ZIQ 502 A 1 HETATM 10 C CE2 ZIQ . . . F 3 10.87 25.472 -31.946 1 92.59 ? CE2 ZIQ 502 A 1 HETATM 11 N NE1 ZIQ . . . F 3 10.267 26.594 -32.367 1 92.37 ? NE1 ZIQ 502 A 1 HETATM 12 C CD1 ZIQ . . . F 3 11.036 27.657 -32.026 1 92.57 ? CD1 ZIQ 502 A 1 HETATM 13 C C1 ZIQ . . . F 3 14.233 29.61 -29.106 1 92.96 ? C1 ZIQ 502 A 1 HETATM 14 C C ZIQ . . . F 3 12.168 30.106 -30.323 1 93.35 ? C ZIQ 502 A 1 HETATM 15 O O ZIQ . . . F 3 12.59 30.637 -31.372 1 93.43 ? O ZIQ 502 A 1 HETATM 16 O OXT ZIQ . . . F 3 11.091 30.421 -29.775 1 93.33 ? OXT ZIQ 502 A 1 # _model_server_stats.io_time_ms 115 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 16 #