data_8R7G # _model_server_result.job_id PuD9LGLe44-KQq-ZH15fnw _model_server_result.datetime_utc '2024-12-03 17:31:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8r7g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":501}' # _entry.id 8R7G # _exptl.entry_id 8R7G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 462.559 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-fluoranyl-6-methoxy-4-[4-methyl-5-[4-(4-propan-2-ylpiperazin-1-yl)phenyl]pyridin-3-yl]benzamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 118.13 _cell.angle_gamma 90 _cell.entry_id 8R7G _cell.length_a 82.818 _cell.length_b 100.594 _cell.length_c 83.584 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8R7G _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,I 1 1 B,F,J 2 1 C,G,K 3 1 D,H,L 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 197 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 395 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 197 _struct_conn.ptnr2_auth_asym_id C _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 395 _struct_conn.ptnr2_symmetry 1_656 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.044 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C27 H31 F N4 O2' _chem_comp.formula_weight 462.559 _chem_comp.id YEE _chem_comp.mon_nstd_flag . _chem_comp.name 2-fluoranyl-6-methoxy-4-[4-methyl-5-[4-(4-propan-2-ylpiperazin-1-yl)phenyl]pyridin-3-yl]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O02 C01 YEE sing 376 n n C03 O02 YEE sing 377 n n C04 C03 YEE doub 378 n y C05 C04 YEE sing 379 n y C07 C06 YEE doub 380 n y N08 C07 YEE sing 381 n y C09 N08 YEE doub 382 n y C10 C09 YEE sing 383 n y C12 C11 YEE doub 384 n y C13 C12 YEE sing 385 n y C14 C13 YEE doub 386 n y C16 N15 YEE sing 387 n n C17 C16 YEE sing 388 n n N18 C17 YEE sing 389 n n C20 C19 YEE sing 390 n n C21 C19 YEE sing 391 n n C19 N18 YEE sing 392 n n C22 N18 YEE sing 393 n n C23 C22 YEE sing 394 n n N15 C14 YEE sing 395 n n C24 C14 YEE sing 396 n y C25 C24 YEE doub 397 n y C11 C10 YEE sing 398 n n C26 C10 YEE doub 399 n y C27 C26 YEE sing 400 n n C06 C05 YEE sing 401 n n C28 C05 YEE doub 402 n y C29 C28 YEE sing 403 n y F30 C29 YEE sing 404 n n C31 C29 YEE doub 405 n y C32 C31 YEE sing 406 n n N33 C32 YEE sing 407 n n O34 C32 YEE doub 408 n n C03 C31 YEE sing 409 n y C06 C26 YEE sing 410 n y C11 C25 YEE sing 411 n y N15 C23 YEE sing 412 n n C16 H162 YEE sing 413 n n C16 H161 YEE sing 414 n n C01 H013 YEE sing 415 n n C01 H012 YEE sing 416 n n C01 H011 YEE sing 417 n n C04 H041 YEE sing 418 n n C07 H071 YEE sing 419 n n C09 H091 YEE sing 420 n n C12 H121 YEE sing 421 n n C13 H131 YEE sing 422 n n C17 H171 YEE sing 423 n n C17 H172 YEE sing 424 n n C19 H191 YEE sing 425 n n C20 H201 YEE sing 426 n n C20 H203 YEE sing 427 n n C20 H202 YEE sing 428 n n C21 H212 YEE sing 429 n n C21 H213 YEE sing 430 n n C21 H211 YEE sing 431 n n C22 H221 YEE sing 432 n n C22 H222 YEE sing 433 n n C23 H231 YEE sing 434 n n C23 H232 YEE sing 435 n n C24 H241 YEE sing 436 n n C25 H251 YEE sing 437 n n C27 H272 YEE sing 438 n n C27 H273 YEE sing 439 n n C27 H271 YEE sing 440 n n C28 H281 YEE sing 441 n n N33 H332 YEE sing 442 n n N33 H331 YEE sing 443 n n # _atom_sites.entry_id 8R7G _atom_sites.fract_transf_matrix[1][1] 0.012075 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006455 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009941 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013566 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 YEE A 1 501 501 YEE 234 . F 2 YEE B 1 501 501 YEE 234 . G 2 YEE C 1 501 501 YEE 234 . H 2 YEE D 1 501 501 YEE 234 . I 3 HOH A 1 601 16 HOH HOH . I 3 HOH A 2 602 40 HOH HOH . I 3 HOH A 3 603 68 HOH HOH . I 3 HOH A 4 604 76 HOH HOH . I 3 HOH A 5 605 36 HOH HOH . I 3 HOH A 6 606 39 HOH HOH . I 3 HOH A 7 607 22 HOH HOH . I 3 HOH A 8 608 69 HOH HOH . I 3 HOH A 9 609 47 HOH HOH . I 3 HOH A 10 610 14 HOH HOH . I 3 HOH A 11 611 55 HOH HOH . I 3 HOH A 12 612 20 HOH HOH . I 3 HOH A 13 613 95 HOH HOH . I 3 HOH A 14 614 48 HOH HOH . I 3 HOH A 15 615 67 HOH HOH . I 3 HOH A 16 616 53 HOH HOH . I 3 HOH A 17 617 56 HOH HOH . I 3 HOH A 18 618 34 HOH HOH . I 3 HOH A 19 619 32 HOH HOH . I 3 HOH A 20 620 4 HOH HOH . I 3 HOH A 21 621 49 HOH HOH . I 3 HOH A 22 622 3 HOH HOH . I 3 HOH A 23 623 12 HOH HOH . I 3 HOH A 24 624 126 HOH HOH . I 3 HOH A 25 625 124 HOH HOH . I 3 HOH A 26 626 65 HOH HOH . I 3 HOH A 27 627 52 HOH HOH . I 3 HOH A 28 628 26 HOH HOH . I 3 HOH A 29 629 90 HOH HOH . I 3 HOH A 30 630 19 HOH HOH . I 3 HOH A 31 631 57 HOH HOH . I 3 HOH A 32 632 11 HOH HOH . I 3 HOH A 33 633 129 HOH HOH . I 3 HOH A 34 634 74 HOH HOH . I 3 HOH A 35 635 18 HOH HOH . J 3 HOH B 1 601 112 HOH HOH . J 3 HOH B 2 602 37 HOH HOH . J 3 HOH B 3 603 44 HOH HOH . J 3 HOH B 4 604 41 HOH HOH . J 3 HOH B 5 605 23 HOH HOH . J 3 HOH B 6 606 84 HOH HOH . J 3 HOH B 7 607 71 HOH HOH . J 3 HOH B 8 608 73 HOH HOH . J 3 HOH B 9 609 9 HOH HOH . J 3 HOH B 10 610 46 HOH HOH . J 3 HOH B 11 611 120 HOH HOH . J 3 HOH B 12 612 54 HOH HOH . J 3 HOH B 13 613 38 HOH HOH . J 3 HOH B 14 614 72 HOH HOH . J 3 HOH B 15 615 8 HOH HOH . J 3 HOH B 16 616 30 HOH HOH . J 3 HOH B 17 617 2 HOH HOH . J 3 HOH B 18 618 31 HOH HOH . J 3 HOH B 19 619 104 HOH HOH . J 3 HOH B 20 620 82 HOH HOH . J 3 HOH B 21 621 21 HOH HOH . J 3 HOH B 22 622 125 HOH HOH . J 3 HOH B 23 623 122 HOH HOH . J 3 HOH B 24 624 105 HOH HOH . J 3 HOH B 25 625 109 HOH HOH . J 3 HOH B 26 626 94 HOH HOH . J 3 HOH B 27 627 93 HOH HOH . J 3 HOH B 28 628 110 HOH HOH . K 3 HOH C 1 601 25 HOH HOH . K 3 HOH C 2 602 97 HOH HOH . K 3 HOH C 3 603 51 HOH HOH . K 3 HOH C 4 604 13 HOH HOH . K 3 HOH C 5 605 45 HOH HOH . K 3 HOH C 6 606 42 HOH HOH . K 3 HOH C 7 607 17 HOH HOH . K 3 HOH C 8 608 50 HOH HOH . K 3 HOH C 9 609 7 HOH HOH . K 3 HOH C 10 610 119 HOH HOH . K 3 HOH C 11 611 29 HOH HOH . K 3 HOH C 12 612 99 HOH HOH . K 3 HOH C 13 613 108 HOH HOH . K 3 HOH C 14 614 10 HOH HOH . K 3 HOH C 15 615 24 HOH HOH . K 3 HOH C 16 616 127 HOH HOH . L 3 HOH D 1 601 70 HOH HOH . L 3 HOH D 2 602 91 HOH HOH . L 3 HOH D 3 603 103 HOH HOH . L 3 HOH D 4 604 89 HOH HOH . L 3 HOH D 5 605 28 HOH HOH . L 3 HOH D 6 606 33 HOH HOH . L 3 HOH D 7 607 118 HOH HOH . L 3 HOH D 8 608 101 HOH HOH . L 3 HOH D 9 609 75 HOH HOH . L 3 HOH D 10 610 27 HOH HOH . L 3 HOH D 11 611 60 HOH HOH . L 3 HOH D 12 612 107 HOH HOH . L 3 HOH D 13 613 98 HOH HOH . L 3 HOH D 14 614 117 HOH HOH . L 3 HOH D 15 615 128 HOH HOH . L 3 HOH D 16 616 100 HOH HOH . L 3 HOH D 17 617 78 HOH HOH . L 3 HOH D 18 618 96 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C14 YEE . . . F 2 -7.109 -39.106 -24.938 1 50.19 ? C14 YEE 501 B 1 HETATM 2 C C16 YEE . . . F 2 -9.131 -38.889 -23.393 1 59.82 ? C16 YEE 501 B 1 HETATM 3 C C32 YEE . . . F 2 2.717 -38.877 -31.334 1 45.88 ? C32 YEE 501 B 1 HETATM 4 C C01 YEE . . . F 2 3.651 -38.494 -27.242 1 44.73 ? C01 YEE 501 B 1 HETATM 5 C C03 YEE . . . F 2 2.047 -38.2 -28.967 1 43.9 ? C03 YEE 501 B 1 HETATM 6 C C04 YEE . . . F 2 1.097 -37.827 -27.989 1 43.79 ? C04 YEE 501 B 1 HETATM 7 C C05 YEE . . . F 2 -0.256 -37.737 -28.343 1 44.2 ? C05 YEE 501 B 1 HETATM 8 C C06 YEE . . . F 2 -1.241 -37.355 -27.401 1 43.08 ? C06 YEE 501 B 1 HETATM 9 C C07 YEE . . . F 2 -1.049 -36.136 -26.711 1 43.76 ? C07 YEE 501 B 1 HETATM 10 C C09 YEE . . . F 2 -3.032 -36.341 -25.544 1 44.12 ? C09 YEE 501 B 1 HETATM 11 C C10 YEE . . . F 2 -3.316 -37.586 -26.154 1 44.32 ? C10 YEE 501 B 1 HETATM 12 C C11 YEE . . . F 2 -4.586 -38.155 -25.768 1 45.6 ? C11 YEE 501 B 1 HETATM 13 C C12 YEE . . . F 2 -5.474 -38.695 -26.69 1 45.46 ? C12 YEE 501 B 1 HETATM 14 C C13 YEE . . . F 2 -6.734 -39.198 -26.296 1 47.14 ? C13 YEE 501 B 1 HETATM 15 C C17 YEE . . . F 2 -10.498 -39.408 -22.91 1 70.27 ? C17 YEE 501 B 1 HETATM 16 C C19 YEE . . . F 2 -11.976 -41.095 -23.363 1 73.27 ? C19 YEE 501 B 1 HETATM 17 C C20 YEE . . . F 2 -13.02 -40.51 -22.342 1 71.88 ? C20 YEE 501 B 1 HETATM 18 C C21 YEE . . . F 2 -12.746 -41.783 -24.488 1 74.35 ? C21 YEE 501 B 1 HETATM 19 C C22 YEE . . . F 2 -10.85 -40.111 -25.143 1 64.92 ? C22 YEE 501 B 1 HETATM 20 C C23 YEE . . . F 2 -9.35 -40.316 -25.386 1 58.65 ? C23 YEE 501 B 1 HETATM 21 C C24 YEE . . . F 2 -6.28 -38.495 -24.029 1 48.77 ? C24 YEE 501 B 1 HETATM 22 C C25 YEE . . . F 2 -5.006 -38.002 -24.432 1 46.56 ? C25 YEE 501 B 1 HETATM 23 C C26 YEE . . . F 2 -2.422 -38.106 -27.138 1 43.36 ? C26 YEE 501 B 1 HETATM 24 C C27 YEE . . . F 2 -2.695 -39.464 -27.852 1 44.27 ? C27 YEE 501 B 1 HETATM 25 C C28 YEE . . . F 2 -0.633 -37.976 -29.679 1 44.4 ? C28 YEE 501 B 1 HETATM 26 C C29 YEE . . . F 2 0.296 -38.352 -30.652 1 43.75 ? C29 YEE 501 B 1 HETATM 27 C C31 YEE . . . F 2 1.655 -38.449 -30.282 1 44.71 ? C31 YEE 501 B 1 HETATM 28 F F30 YEE . . . F 2 -0.131 -38.611 -31.937 1 44.91 ? F30 YEE 501 B 1 HETATM 29 N N08 YEE . . . F 2 -1.917 -35.654 -25.804 1 44.26 ? N08 YEE 501 B 1 HETATM 30 N N15 YEE . . . F 2 -8.473 -39.56 -24.509 1 55.67 ? N15 YEE 501 B 1 HETATM 31 N N18 YEE . . . F 2 -11.241 -40.117 -23.818 1 80.91 ? N18 YEE 501 B 1 HETATM 32 N N33 YEE . . . F 2 2.49 -40.106 -32.071 1 45.91 ? N33 YEE 501 B 1 HETATM 33 O O02 YEE . . . F 2 3.425 -38.3 -28.624 1 43.72 ? O02 YEE 501 B 1 HETATM 34 O O34 YEE . . . F 2 3.7 -38.231 -31.531 1 45.13 ? O34 YEE 501 B 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 34 #