data_8R8C
#
_model_server_result.job_id            oZR0n5P33nEkTsu1n2JoIA 
_model_server_result.datetime_utc      '2025-03-01 05:34:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8r8c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":202}' 
#
_entry.id    8R8C 
#
_exptl.entry_id    8R8C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              112.411 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CADMIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.166 
_cell.angle_gamma         90 
_cell.entry_id            8R8C 
_cell.length_a            36.613 
_cell.length_b            36.86 
_cell.length_c            94.813 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8R8C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 17 A CYS 19 1_555 A SG CYS 36 A CYS 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
disulf ? disulf2 A SG CYS 58 A CYS 60 1_555 A SG CYS 75 A CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? 
covale ? covale1 E C1 NGA . A NGA 204 1_555 F O1 A2G . A A2G 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.263 ? 
covale ? covale2 E C1 NGA . A NGA 204 1_555 F O5 A2G . A A2G 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? 
covale ? covale3 E C3 NGA . A NGA 204 1_555 F O3 A2G . A A2G 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.418 ? 
covale ? covale4 E C4 NGA . A NGA 204 1_555 F O4 A2G . A A2G 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.406 ? 
covale ? covale5 E C5 NGA . A NGA 204 1_555 F O5 A2G . A A2G 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.492 ? 
covale ? covale6 E C6 NGA . A NGA 204 1_555 F O6 A2G . A A2G 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.491 ? 
covale ? covale7 E C7 NGA . A NGA 204 1_555 F O7 A2G . A A2G 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.273 ? 
covale ? covale8 E O1 NGA . A NGA 204 1_555 F C1 A2G . A A2G 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale9 E O3 NGA . A NGA 204 1_555 F C3 A2G . A A2G 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? 
covale ? covale10 E O4 NGA . A NGA 204 1_555 F C4 A2G . A A2G 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? 
covale ? covale11 E O5 NGA . A NGA 204 1_555 F C1 A2G . A A2G 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.396 ? 
covale ? covale12 E O5 NGA . A NGA 204 1_555 F C5 A2G . A A2G 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.399 ? 
covale ? covale13 E O6 NGA . A NGA 204 1_555 F C6 A2G . A A2G 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.422 ? 
covale ? covale14 E O7 NGA . A NGA 204 1_555 F C7 A2G . A A2G 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.225 ? 
metalc ? metalc1 A NE2 HIS 9 A HIS 11 1_555 B CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? 
metalc ? metalc2 A NE2 HIS 28 A HIS 30 1_555 C CD CD . A CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? 
metalc ? metalc3 A NE2 HIS 64 A HIS 66 1_555 B CD CD . A CD 201 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? 
metalc ? metalc4 A OD2 ASP 73 A ASP 75 1_555 C CD CD . A CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? 
metalc ? metalc5 A OD1 ASN 81 A ASN 83 1_555 D CD CD . A CD 203 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.161 ? 
metalc ? metalc6 A ND2 ASN 81 A ASN 83 1_555 D CD CD . A CD 203 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.558 ? 
metalc ? metalc7 A OD2 ASP 90 A ASP 92 1_555 D CD CD . A CD 203 4_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? 
metalc ? metalc8 A OG1 THR 92 A THR 94 1_555 D CD CD . A CD 203 4_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? 
metalc ? metalc9 A OXT ASP 130 A ASP 132 1_555 B CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? 
metalc ? metalc10 B CD CD . A CD 201 1_555 G O HOH . A HOH 316 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? 
metalc ? metalc11 B CD CD . A CD 201 1_555 G O HOH . A HOH 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
metalc ? metalc12 B CD CD . A CD 201 1_555 G O HOH . A HOH 404 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? 
metalc ? metalc13 C CD CD . A CD 202 1_555 G O HOH . A HOH 352 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? 
metalc ? metalc14 C CD CD . A CD 202 1_555 G O HOH . A HOH 393 2_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
metalc ? metalc15 C CD CD . A CD 202 1_555 G O HOH . A HOH 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? 
metalc ? metalc16 C CD CD . A CD 202 1_555 G O HOH . A HOH 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? 
metalc ? metalc17 D CD CD . A CD 203 1_555 G O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? 
metalc ? metalc18 D CD CD . A CD 203 1_555 G O HOH . A HOH 366 4_646 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? 
metalc ? metalc19 D CD CD . A CD 203 1_555 G O HOH . A HOH 436 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? 
#
_chem_comp.formula           'Cd 2' 
_chem_comp.formula_weight    112.411 
_chem_comp.id                CD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CADMIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8R8C 
_atom_sites.fract_transf_matrix[1][1]    0.027313 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004407 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02713 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010683 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CD A 1 201 201 CD CD . 
C 2 CD A 1 202 202 CD CD . 
D 2 CD A 1 203 203 CD CD . 
E 3 NGA A 1 204 206 NGA NGA . 
F 4 A2G A 1 205 207 A2G A2G . 
G 5 HOH A 1 301 110 HOH HOH . 
G 5 HOH A 2 302 109 HOH HOH . 
G 5 HOH A 3 303 50 HOH HOH . 
G 5 HOH A 4 304 117 HOH HOH . 
G 5 HOH A 5 305 130 HOH HOH . 
G 5 HOH A 6 306 61 HOH HOH . 
G 5 HOH A 7 307 39 HOH HOH . 
G 5 HOH A 8 308 145 HOH HOH . 
G 5 HOH A 9 309 69 HOH HOH . 
G 5 HOH A 10 310 96 HOH HOH . 
G 5 HOH A 11 311 99 HOH HOH . 
G 5 HOH A 12 312 155 HOH HOH . 
G 5 HOH A 13 313 46 HOH HOH . 
G 5 HOH A 14 314 56 HOH HOH . 
G 5 HOH A 15 315 171 HOH HOH . 
G 5 HOH A 16 316 112 HOH HOH . 
G 5 HOH A 17 317 26 HOH HOH . 
G 5 HOH A 18 318 121 HOH HOH . 
G 5 HOH A 19 319 139 HOH HOH . 
G 5 HOH A 20 320 135 HOH HOH . 
G 5 HOH A 21 321 137 HOH HOH . 
G 5 HOH A 22 322 118 HOH HOH . 
G 5 HOH A 23 323 4 HOH HOH . 
G 5 HOH A 24 324 147 HOH HOH . 
G 5 HOH A 25 325 6 HOH HOH . 
G 5 HOH A 26 326 66 HOH HOH . 
G 5 HOH A 27 327 157 HOH HOH . 
G 5 HOH A 28 328 48 HOH HOH . 
G 5 HOH A 29 329 95 HOH HOH . 
G 5 HOH A 30 330 78 HOH HOH . 
G 5 HOH A 31 331 73 HOH HOH . 
G 5 HOH A 32 332 10 HOH HOH . 
G 5 HOH A 33 333 144 HOH HOH . 
G 5 HOH A 34 334 2 HOH HOH . 
G 5 HOH A 35 335 105 HOH HOH . 
G 5 HOH A 36 336 25 HOH HOH . 
G 5 HOH A 37 337 126 HOH HOH . 
G 5 HOH A 38 338 12 HOH HOH . 
G 5 HOH A 39 339 15 HOH HOH . 
G 5 HOH A 40 340 102 HOH HOH . 
G 5 HOH A 41 341 142 HOH HOH . 
G 5 HOH A 42 342 14 HOH HOH . 
G 5 HOH A 43 343 22 HOH HOH . 
G 5 HOH A 44 344 89 HOH HOH . 
G 5 HOH A 45 345 30 HOH HOH . 
G 5 HOH A 46 346 5 HOH HOH . 
G 5 HOH A 47 347 97 HOH HOH . 
G 5 HOH A 48 348 59 HOH HOH . 
G 5 HOH A 49 349 8 HOH HOH . 
G 5 HOH A 50 350 27 HOH HOH . 
G 5 HOH A 51 351 141 HOH HOH . 
G 5 HOH A 52 352 165 HOH HOH . 
G 5 HOH A 53 353 76 HOH HOH . 
G 5 HOH A 54 354 20 HOH HOH . 
G 5 HOH A 55 355 51 HOH HOH . 
G 5 HOH A 56 356 49 HOH HOH . 
G 5 HOH A 57 357 13 HOH HOH . 
G 5 HOH A 58 358 53 HOH HOH . 
G 5 HOH A 59 359 7 HOH HOH . 
G 5 HOH A 60 360 11 HOH HOH . 
G 5 HOH A 61 361 72 HOH HOH . 
G 5 HOH A 62 362 115 HOH HOH . 
G 5 HOH A 63 363 45 HOH HOH . 
G 5 HOH A 64 364 148 HOH HOH . 
G 5 HOH A 65 365 36 HOH HOH . 
G 5 HOH A 66 366 52 HOH HOH . 
G 5 HOH A 67 367 19 HOH HOH . 
G 5 HOH A 68 368 47 HOH HOH . 
G 5 HOH A 69 369 94 HOH HOH . 
G 5 HOH A 70 370 100 HOH HOH . 
G 5 HOH A 71 371 101 HOH HOH . 
G 5 HOH A 72 372 17 HOH HOH . 
G 5 HOH A 73 373 60 HOH HOH . 
G 5 HOH A 74 374 18 HOH HOH . 
G 5 HOH A 75 375 124 HOH HOH . 
G 5 HOH A 76 376 116 HOH HOH . 
G 5 HOH A 77 377 64 HOH HOH . 
G 5 HOH A 78 378 23 HOH HOH . 
G 5 HOH A 79 379 68 HOH HOH . 
G 5 HOH A 80 380 24 HOH HOH . 
G 5 HOH A 81 381 31 HOH HOH . 
G 5 HOH A 82 382 37 HOH HOH . 
G 5 HOH A 83 383 70 HOH HOH . 
G 5 HOH A 84 384 131 HOH HOH . 
G 5 HOH A 85 385 133 HOH HOH . 
G 5 HOH A 86 386 107 HOH HOH . 
G 5 HOH A 87 387 65 HOH HOH . 
G 5 HOH A 88 388 143 HOH HOH . 
G 5 HOH A 89 389 151 HOH HOH . 
G 5 HOH A 90 390 43 HOH HOH . 
G 5 HOH A 91 391 29 HOH HOH . 
G 5 HOH A 92 392 103 HOH HOH . 
G 5 HOH A 93 393 88 HOH HOH . 
G 5 HOH A 94 394 98 HOH HOH . 
G 5 HOH A 95 395 167 HOH HOH . 
G 5 HOH A 96 396 71 HOH HOH . 
G 5 HOH A 97 397 34 HOH HOH . 
G 5 HOH A 98 398 85 HOH HOH . 
G 5 HOH A 99 399 58 HOH HOH . 
G 5 HOH A 100 400 138 HOH HOH . 
G 5 HOH A 101 401 170 HOH HOH . 
G 5 HOH A 102 402 90 HOH HOH . 
G 5 HOH A 103 403 166 HOH HOH . 
G 5 HOH A 104 404 84 HOH HOH . 
G 5 HOH A 105 405 67 HOH HOH . 
G 5 HOH A 106 406 152 HOH HOH . 
G 5 HOH A 107 407 9 HOH HOH . 
G 5 HOH A 108 408 93 HOH HOH . 
G 5 HOH A 109 409 21 HOH HOH . 
G 5 HOH A 110 410 106 HOH HOH . 
G 5 HOH A 111 411 28 HOH HOH . 
G 5 HOH A 112 412 173 HOH HOH . 
G 5 HOH A 113 413 16 HOH HOH . 
G 5 HOH A 114 414 92 HOH HOH . 
G 5 HOH A 115 415 57 HOH HOH . 
G 5 HOH A 116 416 44 HOH HOH . 
G 5 HOH A 117 417 35 HOH HOH . 
G 5 HOH A 118 418 40 HOH HOH . 
G 5 HOH A 119 419 149 HOH HOH . 
G 5 HOH A 120 420 87 HOH HOH . 
G 5 HOH A 121 421 41 HOH HOH . 
G 5 HOH A 122 422 159 HOH HOH . 
G 5 HOH A 123 423 74 HOH HOH . 
G 5 HOH A 124 424 63 HOH HOH . 
G 5 HOH A 125 425 113 HOH HOH . 
G 5 HOH A 126 426 146 HOH HOH . 
G 5 HOH A 127 427 86 HOH HOH . 
G 5 HOH A 128 428 158 HOH HOH . 
G 5 HOH A 129 429 54 HOH HOH . 
G 5 HOH A 130 430 164 HOH HOH . 
G 5 HOH A 131 431 134 HOH HOH . 
G 5 HOH A 132 432 150 HOH HOH . 
G 5 HOH A 133 433 38 HOH HOH . 
G 5 HOH A 134 434 154 HOH HOH . 
G 5 HOH A 135 435 160 HOH HOH . 
G 5 HOH A 136 436 1 HOH HOH . 
G 5 HOH A 137 437 163 HOH HOH . 
G 5 HOH A 138 438 122 HOH HOH . 
G 5 HOH A 139 439 161 HOH HOH . 
G 5 HOH A 140 440 33 HOH HOH . 
G 5 HOH A 141 441 62 HOH HOH . 
G 5 HOH A 142 442 91 HOH HOH . 
G 5 HOH A 143 443 162 HOH HOH . 
G 5 HOH A 144 444 120 HOH HOH . 
G 5 HOH A 145 445 128 HOH HOH . 
G 5 HOH A 146 446 156 HOH HOH . 
G 5 HOH A 147 447 3 HOH HOH . 
G 5 HOH A 148 448 80 HOH HOH . 
G 5 HOH A 149 449 55 HOH HOH . 
G 5 HOH A 150 450 123 HOH HOH . 
G 5 HOH A 151 451 32 HOH HOH . 
G 5 HOH A 152 452 140 HOH HOH . 
G 5 HOH A 153 453 168 HOH HOH . 
G 5 HOH A 154 454 82 HOH HOH . 
G 5 HOH A 155 455 77 HOH HOH . 
G 5 HOH A 156 456 127 HOH HOH . 
G 5 HOH A 157 457 129 HOH HOH . 
G 5 HOH A 158 458 42 HOH HOH . 
G 5 HOH A 159 459 119 HOH HOH . 
G 5 HOH A 160 460 111 HOH HOH . 
G 5 HOH A 161 461 75 HOH HOH . 
G 5 HOH A 162 462 125 HOH HOH . 
G 5 HOH A 163 463 132 HOH HOH . 
G 5 HOH A 164 464 79 HOH HOH . 
G 5 HOH A 165 465 83 HOH HOH . 
G 5 HOH A 166 466 114 HOH HOH . 
G 5 HOH A 167 467 108 HOH HOH . 
G 5 HOH A 168 468 104 HOH HOH . 
G 5 HOH A 169 469 172 HOH HOH . 
G 5 HOH A 170 470 81 HOH HOH . 
G 5 HOH A 171 471 136 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CD 
_atom_site.label_atom_id         CD 
_atom_site.label_comp_id         CD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               17.274 
_atom_site.Cartn_y               -4.979 
_atom_site.Cartn_z               53.474 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        25.56 
_atom_site.pdbx_formal_charge    0 
_atom_site.auth_atom_id          CD 
_atom_site.auth_comp_id          CD 
_atom_site.auth_seq_id           202 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           1 
#