data_8R8Y # _model_server_result.job_id R094lG_QiBARML2qXA4f5w _model_server_result.datetime_utc '2024-11-05 08:31:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8r8y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 8R8Y # _exptl.entry_id 8R8Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 28.01 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CARBON MONOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107 _cell.angle_gamma 90 _cell.entry_id 8R8Y _cell.length_a 63 _cell.length_b 28.4 _cell.length_c 35.3 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8R8Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 93 A HIS 93 1_555 B FE HEM . A HEM 201 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.028 ? metalc ? metalc2 A NE2 HIS 93 A HIS 93 1_555 B FE HEM . A HEM 201 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.078 ? # _chem_comp.formula 'C O' _chem_comp.formula_weight 28.01 _chem_comp.id CMO _chem_comp.mon_nstd_flag . _chem_comp.name 'CARBON MONOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _chem_comp_bond.atom_id_1 C _chem_comp_bond.atom_id_2 O _chem_comp_bond.comp_id CMO _chem_comp_bond.value_order trip _chem_comp_bond.pdbx_ordinal 70 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 8R8Y _atom_sites.fract_transf_matrix[1][1] 0.015873 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004853 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.035211 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029623 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 201 201 HEM HEM . C 3 SO4 A 1 202 202 SO4 SO4 . D 3 SO4 A 1 203 203 SO4 SO4 . E 4 CMO A 1 204 204 CMO CMO . F 5 HOH A 1 301 77 HOH HOH . F 5 HOH A 2 302 114 HOH HOH . F 5 HOH A 3 303 121 HOH HOH . F 5 HOH A 4 304 125 HOH HOH . F 5 HOH A 5 305 99 HOH HOH . F 5 HOH A 6 306 120 HOH HOH . F 5 HOH A 7 307 110 HOH HOH . F 5 HOH A 8 308 130 HOH HOH . F 5 HOH A 9 309 40 HOH HOH . F 5 HOH A 10 310 57 HOH HOH . F 5 HOH A 11 311 4 HOH HOH . F 5 HOH A 12 312 102 HOH HOH . F 5 HOH A 13 313 33 HOH HOH . F 5 HOH A 14 314 23 HOH HOH . F 5 HOH A 15 315 117 HOH HOH . F 5 HOH A 16 316 37 HOH HOH . F 5 HOH A 17 317 9 HOH HOH . F 5 HOH A 18 318 21 HOH HOH . F 5 HOH A 19 319 28 HOH HOH . F 5 HOH A 20 320 106 HOH HOH . F 5 HOH A 21 321 56 HOH HOH . F 5 HOH A 22 322 32 HOH HOH . F 5 HOH A 23 323 13 HOH HOH . F 5 HOH A 24 324 109 HOH HOH . F 5 HOH A 25 325 14 HOH HOH . F 5 HOH A 26 326 84 HOH HOH . F 5 HOH A 27 327 22 HOH HOH . F 5 HOH A 28 328 10 HOH HOH . F 5 HOH A 29 329 34 HOH HOH . F 5 HOH A 30 330 30 HOH HOH . F 5 HOH A 31 331 45 HOH HOH . F 5 HOH A 32 332 11 HOH HOH . F 5 HOH A 33 333 7 HOH HOH . F 5 HOH A 34 334 72 HOH HOH . F 5 HOH A 35 335 19 HOH HOH . F 5 HOH A 36 336 1 HOH HOH . F 5 HOH A 37 337 54 HOH HOH . F 5 HOH A 38 338 94 HOH HOH . F 5 HOH A 39 339 52 HOH HOH . F 5 HOH A 40 340 90 HOH HOH . F 5 HOH A 41 341 112 HOH HOH . F 5 HOH A 42 342 39 HOH HOH . F 5 HOH A 43 343 20 HOH HOH . F 5 HOH A 44 344 82 HOH HOH . F 5 HOH A 45 345 68 HOH HOH . F 5 HOH A 46 346 64 HOH HOH . F 5 HOH A 47 347 67 HOH HOH . F 5 HOH A 48 348 29 HOH HOH . F 5 HOH A 49 349 35 HOH HOH . F 5 HOH A 50 350 85 HOH HOH . F 5 HOH A 51 351 6 HOH HOH . F 5 HOH A 52 352 31 HOH HOH . F 5 HOH A 53 353 41 HOH HOH . F 5 HOH A 54 354 74 HOH HOH . F 5 HOH A 55 355 55 HOH HOH . F 5 HOH A 56 356 95 HOH HOH . F 5 HOH A 57 357 49 HOH HOH . F 5 HOH A 58 358 2 HOH HOH . F 5 HOH A 59 359 101 HOH HOH . F 5 HOH A 60 360 36 HOH HOH . F 5 HOH A 61 361 18 HOH HOH . F 5 HOH A 62 362 27 HOH HOH . F 5 HOH A 63 363 118 HOH HOH . F 5 HOH A 64 364 86 HOH HOH . F 5 HOH A 65 365 69 HOH HOH . F 5 HOH A 66 366 105 HOH HOH . F 5 HOH A 67 367 60 HOH HOH . F 5 HOH A 68 368 58 HOH HOH . F 5 HOH A 69 369 119 HOH HOH . F 5 HOH A 70 370 66 HOH HOH . F 5 HOH A 71 371 92 HOH HOH . F 5 HOH A 72 372 44 HOH HOH . F 5 HOH A 73 373 17 HOH HOH . F 5 HOH A 74 374 3 HOH HOH . F 5 HOH A 75 375 70 HOH HOH . F 5 HOH A 76 376 78 HOH HOH . F 5 HOH A 77 377 76 HOH HOH . F 5 HOH A 78 378 51 HOH HOH . F 5 HOH A 79 379 5 HOH HOH . F 5 HOH A 80 380 50 HOH HOH . F 5 HOH A 81 381 123 HOH HOH . F 5 HOH A 82 382 15 HOH HOH . F 5 HOH A 83 383 63 HOH HOH . F 5 HOH A 84 384 47 HOH HOH . F 5 HOH A 85 385 12 HOH HOH . F 5 HOH A 86 386 59 HOH HOH . F 5 HOH A 87 387 65 HOH HOH . F 5 HOH A 88 388 38 HOH HOH . F 5 HOH A 89 389 80 HOH HOH . F 5 HOH A 90 390 96 HOH HOH . F 5 HOH A 91 391 26 HOH HOH . F 5 HOH A 92 392 25 HOH HOH . F 5 HOH A 93 393 61 HOH HOH . F 5 HOH A 94 394 48 HOH HOH . F 5 HOH A 95 395 73 HOH HOH . F 5 HOH A 96 396 24 HOH HOH . F 5 HOH A 97 397 111 HOH HOH . F 5 HOH A 98 398 46 HOH HOH . F 5 HOH A 99 399 100 HOH HOH . F 5 HOH A 100 400 8 HOH HOH . F 5 HOH A 101 401 53 HOH HOH . F 5 HOH A 102 402 43 HOH HOH . F 5 HOH A 103 403 16 HOH HOH . F 5 HOH A 104 404 75 HOH HOH . F 5 HOH A 105 405 79 HOH HOH . F 5 HOH A 106 406 42 HOH HOH . F 5 HOH A 107 407 91 HOH HOH . F 5 HOH A 108 408 103 HOH HOH . F 5 HOH A 109 409 115 HOH HOH . F 5 HOH A 110 410 129 HOH HOH . F 5 HOH A 111 411 71 HOH HOH . F 5 HOH A 112 412 83 HOH HOH . F 5 HOH A 113 413 122 HOH HOH . F 5 HOH A 114 414 108 HOH HOH . F 5 HOH A 115 415 104 HOH HOH . F 5 HOH A 116 416 87 HOH HOH . F 5 HOH A 117 417 98 HOH HOH . F 5 HOH A 118 418 89 HOH HOH . F 5 HOH A 119 419 107 HOH HOH . F 5 HOH A 120 420 62 HOH HOH . F 5 HOH A 121 421 127 HOH HOH . F 5 HOH A 122 422 128 HOH HOH . F 5 HOH A 123 423 124 HOH HOH . F 5 HOH A 124 424 93 HOH HOH . F 5 HOH A 125 425 97 HOH HOH . F 5 HOH A 126 426 88 HOH HOH . F 5 HOH A 127 427 113 HOH HOH . F 5 HOH A 128 428 116 HOH HOH . F 5 HOH A 129 429 81 HOH HOH . F 5 HOH A 130 430 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C CMO . A . E 4 15.711 -0.665 5.125 0.6 9.1 ? C CMO 204 A 1 HETATM 2 C C CMO . C . E 4 16.488 -2.663 4.778 0.33 10.28 ? C CMO 204 A 1 HETATM 3 O O CMO . A . E 4 16.768 -1.234 4.919 0.6 14.68 ? O CMO 204 A 1 HETATM 4 O O CMO . C . E 4 16.688 -3.455 3.837 0.33 15.25 ? O CMO 204 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #