data_8RA0 # _model_server_result.job_id ccDMA1t4lkdApqZoddyheg _model_server_result.datetime_utc '2024-10-11 02:23:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ra0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 8RA0 # _exptl.entry_id 8RA0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.1 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRATE ANION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.833 _cell.angle_gamma 90 _cell.entry_id 8RA0 _cell.length_a 44.052 _cell.length_b 68.776 _cell.length_c 75.399 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RA0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id C _struct_conn.ptnr1_label_comp_id CXM _struct_conn.ptnr1_label_seq_id 1 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CXM _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id N _struct_conn.ptnr2_label_comp_id LEU _struct_conn.ptnr2_label_seq_id 2 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id LEU _struct_conn.ptnr2_auth_seq_id 2 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.321 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C6 H5 O7 -3' _chem_comp.formula_weight 189.1 _chem_comp.id FLC _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRATE ANION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAC CA FLC sing 105 n n CAC OA1 FLC doub 106 n n CAC OA2 FLC sing 107 n n CA CB FLC sing 108 n n CA HA1 FLC sing 109 n n CA HA2 FLC sing 110 n n CB CBC FLC sing 111 n n CB CG FLC sing 112 n n CB OHB FLC sing 113 n n CBC OB1 FLC doub 114 n n CBC OB2 FLC sing 115 n n CG CGC FLC sing 116 n n CG HG1 FLC sing 117 n n CG HG2 FLC sing 118 n n CGC OG1 FLC doub 119 n n CGC OG2 FLC sing 120 n n OHB HOB FLC sing 121 n n # _atom_sites.entry_id 8RA0 _atom_sites.fract_transf_matrix[1][1] 0.0227 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00272 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01454 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013358 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PG4 A 1 501 502 PG4 PG4 . C 3 FLC A 1 502 841 FLC CIT . D 4 HOH A 1 601 603 HOH HOH . D 4 HOH A 2 602 604 HOH HOH . D 4 HOH A 3 603 736 HOH HOH . D 4 HOH A 4 604 608 HOH HOH . D 4 HOH A 5 605 610 HOH HOH . D 4 HOH A 6 606 615 HOH HOH . D 4 HOH A 7 607 609 HOH HOH . D 4 HOH A 8 608 24 HOH HOH . D 4 HOH A 9 609 607 HOH HOH . D 4 HOH A 10 610 612 HOH HOH . D 4 HOH A 11 611 635 HOH HOH . D 4 HOH A 12 612 629 HOH HOH . D 4 HOH A 13 613 619 HOH HOH . D 4 HOH A 14 614 627 HOH HOH . D 4 HOH A 15 615 614 HOH HOH . D 4 HOH A 16 616 617 HOH HOH . D 4 HOH A 17 617 611 HOH HOH . D 4 HOH A 18 618 623 HOH HOH . D 4 HOH A 19 619 7 HOH HOH . D 4 HOH A 20 620 616 HOH HOH . D 4 HOH A 21 621 641 HOH HOH . D 4 HOH A 22 622 631 HOH HOH . D 4 HOH A 23 623 643 HOH HOH . D 4 HOH A 24 624 626 HOH HOH . D 4 HOH A 25 625 628 HOH HOH . D 4 HOH A 26 626 633 HOH HOH . D 4 HOH A 27 627 640 HOH HOH . D 4 HOH A 28 628 650 HOH HOH . D 4 HOH A 29 629 621 HOH HOH . D 4 HOH A 30 630 652 HOH HOH . D 4 HOH A 31 631 639 HOH HOH . D 4 HOH A 32 632 624 HOH HOH . D 4 HOH A 33 633 646 HOH HOH . D 4 HOH A 34 634 649 HOH HOH . D 4 HOH A 35 635 634 HOH HOH . D 4 HOH A 36 636 15 HOH HOH . D 4 HOH A 37 637 3 HOH HOH . D 4 HOH A 38 638 625 HOH HOH . D 4 HOH A 39 639 630 HOH HOH . D 4 HOH A 40 640 645 HOH HOH . D 4 HOH A 41 641 632 HOH HOH . D 4 HOH A 42 642 636 HOH HOH . D 4 HOH A 43 643 661 HOH HOH . D 4 HOH A 44 644 671 HOH HOH . D 4 HOH A 45 645 618 HOH HOH . D 4 HOH A 46 646 642 HOH HOH . D 4 HOH A 47 647 10 HOH HOH . D 4 HOH A 48 648 654 HOH HOH . D 4 HOH A 49 649 657 HOH HOH . D 4 HOH A 50 650 638 HOH HOH . D 4 HOH A 51 651 26 HOH HOH . D 4 HOH A 52 652 659 HOH HOH . D 4 HOH A 53 653 713 HOH HOH . D 4 HOH A 54 654 637 HOH HOH . D 4 HOH A 55 655 690 HOH HOH . D 4 HOH A 56 656 667 HOH HOH . D 4 HOH A 57 657 656 HOH HOH . D 4 HOH A 58 658 684 HOH HOH . D 4 HOH A 59 659 678 HOH HOH . D 4 HOH A 60 660 673 HOH HOH . D 4 HOH A 61 661 653 HOH HOH . D 4 HOH A 62 662 651 HOH HOH . D 4 HOH A 63 663 753 HOH HOH . D 4 HOH A 64 664 689 HOH HOH . D 4 HOH A 65 665 662 HOH HOH . D 4 HOH A 66 666 720 HOH HOH . D 4 HOH A 67 667 683 HOH HOH . D 4 HOH A 68 668 718 HOH HOH . D 4 HOH A 69 669 701 HOH HOH . D 4 HOH A 70 670 663 HOH HOH . D 4 HOH A 71 671 677 HOH HOH . D 4 HOH A 72 672 715 HOH HOH . D 4 HOH A 73 673 711 HOH HOH . D 4 HOH A 74 674 679 HOH HOH . D 4 HOH A 75 675 668 HOH HOH . D 4 HOH A 76 676 658 HOH HOH . D 4 HOH A 77 677 686 HOH HOH . D 4 HOH A 78 678 685 HOH HOH . D 4 HOH A 79 679 644 HOH HOH . D 4 HOH A 80 680 682 HOH HOH . D 4 HOH A 81 681 732 HOH HOH . D 4 HOH A 82 682 647 HOH HOH . D 4 HOH A 83 683 681 HOH HOH . D 4 HOH A 84 684 694 HOH HOH . D 4 HOH A 85 685 688 HOH HOH . D 4 HOH A 86 686 726 HOH HOH . D 4 HOH A 87 687 20 HOH HOH . D 4 HOH A 88 688 738 HOH HOH . D 4 HOH A 89 689 666 HOH HOH . D 4 HOH A 90 690 700 HOH HOH . D 4 HOH A 91 691 699 HOH HOH . D 4 HOH A 92 692 622 HOH HOH . D 4 HOH A 93 693 717 HOH HOH . D 4 HOH A 94 694 25 HOH HOH . D 4 HOH A 95 695 714 HOH HOH . D 4 HOH A 96 696 743 HOH HOH . D 4 HOH A 97 697 708 HOH HOH . D 4 HOH A 98 698 727 HOH HOH . D 4 HOH A 99 699 14 HOH HOH . D 4 HOH A 100 700 764 HOH HOH . D 4 HOH A 101 701 675 HOH HOH . D 4 HOH A 102 702 702 HOH HOH . D 4 HOH A 103 703 693 HOH HOH . D 4 HOH A 104 704 669 HOH HOH . D 4 HOH A 105 705 691 HOH HOH . D 4 HOH A 106 706 29 HOH HOH . D 4 HOH A 107 707 660 HOH HOH . D 4 HOH A 108 708 665 HOH HOH . D 4 HOH A 109 709 730 HOH HOH . D 4 HOH A 110 710 672 HOH HOH . D 4 HOH A 111 711 710 HOH HOH . D 4 HOH A 112 712 692 HOH HOH . D 4 HOH A 113 713 676 HOH HOH . D 4 HOH A 114 714 731 HOH HOH . D 4 HOH A 115 715 741 HOH HOH . D 4 HOH A 116 716 721 HOH HOH . D 4 HOH A 117 717 674 HOH HOH . D 4 HOH A 118 718 757 HOH HOH . D 4 HOH A 119 719 740 HOH HOH . D 4 HOH A 120 720 707 HOH HOH . D 4 HOH A 121 721 680 HOH HOH . D 4 HOH A 122 722 724 HOH HOH . D 4 HOH A 123 723 750 HOH HOH . D 4 HOH A 124 724 739 HOH HOH . D 4 HOH A 125 725 765 HOH HOH . D 4 HOH A 126 726 735 HOH HOH . D 4 HOH A 127 727 670 HOH HOH . D 4 HOH A 128 728 719 HOH HOH . D 4 HOH A 129 729 620 HOH HOH . D 4 HOH A 130 730 9 HOH HOH . D 4 HOH A 131 731 664 HOH HOH . D 4 HOH A 132 732 742 HOH HOH . D 4 HOH A 133 733 697 HOH HOH . D 4 HOH A 134 734 751 HOH HOH . D 4 HOH A 135 735 749 HOH HOH . D 4 HOH A 136 736 703 HOH HOH . D 4 HOH A 137 737 716 HOH HOH . D 4 HOH A 138 738 705 HOH HOH . D 4 HOH A 139 739 754 HOH HOH . D 4 HOH A 140 740 733 HOH HOH . D 4 HOH A 141 741 704 HOH HOH . D 4 HOH A 142 742 746 HOH HOH . D 4 HOH A 143 743 748 HOH HOH . D 4 HOH A 144 744 723 HOH HOH . D 4 HOH A 145 745 722 HOH HOH . D 4 HOH A 146 746 709 HOH HOH . D 4 HOH A 147 747 706 HOH HOH . D 4 HOH A 148 748 745 HOH HOH . D 4 HOH A 149 749 19 HOH HOH . D 4 HOH A 150 750 766 HOH HOH . D 4 HOH A 151 751 755 HOH HOH . D 4 HOH A 152 752 773 HOH HOH . D 4 HOH A 153 753 762 HOH HOH . D 4 HOH A 154 754 763 HOH HOH . D 4 HOH A 155 755 696 HOH HOH . D 4 HOH A 156 756 759 HOH HOH . D 4 HOH A 157 757 695 HOH HOH . D 4 HOH A 158 758 758 HOH HOH . D 4 HOH A 159 759 777 HOH HOH . D 4 HOH A 160 760 761 HOH HOH . D 4 HOH A 161 761 744 HOH HOH . D 4 HOH A 162 762 728 HOH HOH . D 4 HOH A 163 763 769 HOH HOH . D 4 HOH A 164 764 12 HOH HOH . D 4 HOH A 165 765 747 HOH HOH . D 4 HOH A 166 766 783 HOH HOH . D 4 HOH A 167 767 775 HOH HOH . D 4 HOH A 168 768 760 HOH HOH . D 4 HOH A 169 769 687 HOH HOH . D 4 HOH A 170 770 786 HOH HOH . D 4 HOH A 171 771 781 HOH HOH . D 4 HOH A 172 772 767 HOH HOH . D 4 HOH A 173 773 712 HOH HOH . D 4 HOH A 174 774 752 HOH HOH . D 4 HOH A 175 775 774 HOH HOH . D 4 HOH A 176 776 770 HOH HOH . D 4 HOH A 177 777 785 HOH HOH . D 4 HOH A 178 778 776 HOH HOH . D 4 HOH A 179 779 778 HOH HOH . D 4 HOH A 180 780 756 HOH HOH . D 4 HOH A 181 781 725 HOH HOH . D 4 HOH A 182 782 16 HOH HOH . D 4 HOH A 183 783 822 HOH HOH . D 4 HOH A 184 784 768 HOH HOH . D 4 HOH A 185 785 772 HOH HOH . D 4 HOH A 186 786 4 HOH HOH . D 4 HOH A 187 787 27 HOH HOH . D 4 HOH A 188 788 648 HOH HOH . D 4 HOH A 189 789 798 HOH HOH . D 4 HOH A 190 790 794 HOH HOH . D 4 HOH A 191 791 802 HOH HOH . D 4 HOH A 192 792 782 HOH HOH . D 4 HOH A 193 793 22 HOH HOH . D 4 HOH A 194 794 787 HOH HOH . D 4 HOH A 195 795 796 HOH HOH . D 4 HOH A 196 796 784 HOH HOH . D 4 HOH A 197 797 805 HOH HOH . D 4 HOH A 198 798 801 HOH HOH . D 4 HOH A 199 799 797 HOH HOH . D 4 HOH A 200 800 780 HOH HOH . D 4 HOH A 201 801 808 HOH HOH . D 4 HOH A 202 802 803 HOH HOH . D 4 HOH A 203 803 734 HOH HOH . D 4 HOH A 204 804 792 HOH HOH . D 4 HOH A 205 805 13 HOH HOH . D 4 HOH A 206 806 771 HOH HOH . D 4 HOH A 207 807 788 HOH HOH . D 4 HOH A 208 808 791 HOH HOH . D 4 HOH A 209 809 23 HOH HOH . D 4 HOH A 210 810 790 HOH HOH . D 4 HOH A 211 811 789 HOH HOH . D 4 HOH A 212 812 18 HOH HOH . D 4 HOH A 213 813 800 HOH HOH . D 4 HOH A 214 814 818 HOH HOH . D 4 HOH A 215 815 795 HOH HOH . D 4 HOH A 216 816 799 HOH HOH . D 4 HOH A 217 817 809 HOH HOH . D 4 HOH A 218 818 779 HOH HOH . D 4 HOH A 219 819 814 HOH HOH . D 4 HOH A 220 820 804 HOH HOH . D 4 HOH A 221 821 812 HOH HOH . D 4 HOH A 222 822 820 HOH HOH . D 4 HOH A 223 823 11 HOH HOH . D 4 HOH A 224 824 806 HOH HOH . D 4 HOH A 225 825 817 HOH HOH . D 4 HOH A 226 826 807 HOH HOH . D 4 HOH A 227 827 821 HOH HOH . D 4 HOH A 228 828 613 HOH HOH . D 4 HOH A 229 829 811 HOH HOH . D 4 HOH A 230 830 815 HOH HOH . D 4 HOH A 231 831 819 HOH HOH . D 4 HOH A 232 832 793 HOH HOH . D 4 HOH A 233 833 2 HOH HOH . D 4 HOH A 234 834 810 HOH HOH . D 4 HOH A 235 835 813 HOH HOH . D 4 HOH A 236 836 816 HOH HOH . D 4 HOH A 237 837 824 HOH HOH . D 4 HOH A 238 838 823 HOH HOH . D 4 HOH A 239 839 825 HOH HOH . D 4 HOH A 240 840 828 HOH HOH . D 4 HOH A 241 841 826 HOH HOH . D 4 HOH A 242 842 827 HOH HOH . D 4 HOH A 243 843 6 HOH HOH . D 4 HOH A 244 844 831 HOH HOH . D 4 HOH A 245 845 830 HOH HOH . D 4 HOH A 246 846 832 HOH HOH . D 4 HOH A 247 847 834 HOH HOH . D 4 HOH A 248 848 833 HOH HOH . D 4 HOH A 249 849 829 HOH HOH . D 4 HOH A 250 850 835 HOH HOH . D 4 HOH A 251 851 836 HOH HOH . D 4 HOH A 252 852 838 HOH HOH . D 4 HOH A 253 853 837 HOH HOH . D 4 HOH A 254 854 839 HOH HOH . D 4 HOH A 255 855 840 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAC FLC . . . C 3 13.604 36.78 59.955 1 34.82 ? CAC FLC 502 A 1 HETATM 2 C CA FLC . . . C 3 12.125 36.335 60.054 1 37.87 ? CA FLC 502 A 1 HETATM 3 C CB FLC . . . C 3 11.885 34.983 60.79 1 39.93 ? CB FLC 502 A 1 HETATM 4 C CBC FLC . . . C 3 12.476 33.805 59.936 1 40.01 ? CBC FLC 502 A 1 HETATM 5 C CG FLC . . . C 3 10.368 34.748 60.961 1 43.25 ? CG FLC 502 A 1 HETATM 6 C CGC FLC . . . C 3 10.012 33.514 61.79 1 47.46 ? CGC FLC 502 A 1 HETATM 7 O OA1 FLC . . . C 3 13.876 37.793 59.263 1 35.65 ? OA1 FLC 502 A 1 HETATM 8 O OA2 FLC . . . C 3 14.438 36.113 60.607 1 33.59 ? OA2 FLC 502 A 1 HETATM 9 O OB1 FLC . . . C 3 13.324 33.058 60.518 1 38.95 ? OB1 FLC 502 A 1 HETATM 10 O OB2 FLC . . . C 3 12.061 33.714 58.754 1 39.55 ? OB2 FLC 502 A 1 HETATM 11 O OG1 FLC . . . C 3 8.807 33.26 61.953 1 50.09 ? OG1 FLC 502 A 1 HETATM 12 O OG2 FLC . . . C 3 10.986 32.863 62.273 1 47.49 ? OG2 FLC 502 A 1 HETATM 13 O OHB FLC . . . C 3 12.529 35.073 62.047 1 41.46 ? OHB FLC 502 A 1 HETATM 14 H HA1 FLC . . . C 3 11.753 36.262 59.161 1 45.51 ? HA1 FLC 502 A 1 HETATM 15 H HA2 FLC . . . C 3 11.614 37.021 60.513 1 45.51 ? HA2 FLC 502 A 1 HETATM 16 H HG1 FLC . . . C 3 9.958 34.666 60.086 1 51.96 ? HG1 FLC 502 A 1 HETATM 17 H HG2 FLC . . . C 3 9.97 35.529 61.376 1 51.96 ? HG2 FLC 502 A 1 HETATM 18 H HOB FLC . . . C 3 13.34 34.911 61.849 1 49.82 ? HOB FLC 502 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 18 #