data_8RDN # _model_server_result.job_id 6uKjjPmycZ2_m928kBpLkQ _model_server_result.datetime_utc '2024-10-23 01:26:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8rdn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":403}' # _entry.id 8RDN # _exptl.entry_id 8RDN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8RDN _cell.length_a 112.4 _cell.length_b 218.83 _cell.length_c 55.35 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RDN _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,L,M,N,O,T,V 1 1 D,P,Q,R,S,W 2 1 B,G,H,I,J,K,U 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_556 x+1/2,-y+1/2,-z+1 1 0 0 0 -1 0 0 0 -1 56.2 109.415 55.35 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 I N N ? 4 N N N ? 4 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OD1 ASP 179 B ASP 180 1_555 K NA NA . B NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc2 B O VAL 180 B VAL 181 1_555 K NA NA . B NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.684 ? metalc ? metalc3 B O GLY 181 B GLY 182 1_555 K NA NA . B NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.15 ? metalc ? metalc4 C OG1 THR 178 C THR 179 1_555 O NA NA . C NA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc5 C O PRO 237 C PRO 238 1_555 O NA NA . C NA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.067 ? metalc ? metalc6 D OD1 ASP 5 D ASP 6 1_555 S NA NA . D NA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8RDN _atom_sites.fract_transf_matrix[1][1] 0.008897 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00457 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018067 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SAH A 1 401 998 SAH SAH . F 3 YRH A 1 402 999 YRH LIG . G 2 SAH B 1 401 998 SAH SAH . H 3 YRH B 1 402 999 YRH LIG . I 4 CL B 1 403 1 CL CL . J 5 GOL B 1 404 4 GOL GOL . K 6 NA B 1 405 7 NA NA . L 2 SAH C 1 401 998 SAH SAH . M 3 YRH C 1 402 999 YRH LIG . N 4 CL C 1 403 3 CL CL . O 6 NA C 1 404 6 NA NA . P 2 SAH D 1 401 998 SAH SAH . Q 3 YRH D 1 402 999 YRH LIG . R 4 CL D 1 403 2 CL CL . S 6 NA D 1 404 5 NA NA . T 7 HOH A 1 501 24 HOH HOH . T 7 HOH A 2 502 29 HOH HOH . T 7 HOH A 3 503 145 HOH HOH . T 7 HOH A 4 504 111 HOH HOH . T 7 HOH A 5 505 126 HOH HOH . T 7 HOH A 6 506 68 HOH HOH . T 7 HOH A 7 507 20 HOH HOH . T 7 HOH A 8 508 243 HOH HOH . T 7 HOH A 9 509 162 HOH HOH . T 7 HOH A 10 510 32 HOH HOH . T 7 HOH A 11 511 25 HOH HOH . T 7 HOH A 12 512 184 HOH HOH . T 7 HOH A 13 513 165 HOH HOH . T 7 HOH A 14 514 33 HOH HOH . T 7 HOH A 15 515 117 HOH HOH . T 7 HOH A 16 516 19 HOH HOH . T 7 HOH A 17 517 60 HOH HOH . T 7 HOH A 18 518 61 HOH HOH . T 7 HOH A 19 519 182 HOH HOH . T 7 HOH A 20 520 156 HOH HOH . T 7 HOH A 21 521 97 HOH HOH . T 7 HOH A 22 522 210 HOH HOH . T 7 HOH A 23 523 44 HOH HOH . T 7 HOH A 24 524 47 HOH HOH . T 7 HOH A 25 525 215 HOH HOH . T 7 HOH A 26 526 124 HOH HOH . T 7 HOH A 27 527 86 HOH HOH . T 7 HOH A 28 528 41 HOH HOH . T 7 HOH A 29 529 21 HOH HOH . T 7 HOH A 30 530 79 HOH HOH . T 7 HOH A 31 531 105 HOH HOH . T 7 HOH A 32 532 92 HOH HOH . T 7 HOH A 33 533 62 HOH HOH . T 7 HOH A 34 534 94 HOH HOH . T 7 HOH A 35 535 16 HOH HOH . T 7 HOH A 36 536 174 HOH HOH . T 7 HOH A 37 537 221 HOH HOH . T 7 HOH A 38 538 63 HOH HOH . T 7 HOH A 39 539 188 HOH HOH . T 7 HOH A 40 540 231 HOH HOH . T 7 HOH A 41 541 89 HOH HOH . T 7 HOH A 42 542 109 HOH HOH . T 7 HOH A 43 543 90 HOH HOH . T 7 HOH A 44 544 56 HOH HOH . T 7 HOH A 45 545 223 HOH HOH . T 7 HOH A 46 546 55 HOH HOH . T 7 HOH A 47 547 76 HOH HOH . T 7 HOH A 48 548 103 HOH HOH . T 7 HOH A 49 549 225 HOH HOH . T 7 HOH A 50 550 220 HOH HOH . T 7 HOH A 51 551 238 HOH HOH . T 7 HOH A 52 552 199 HOH HOH . T 7 HOH A 53 553 115 HOH HOH . T 7 HOH A 54 554 195 HOH HOH . T 7 HOH A 55 555 216 HOH HOH . T 7 HOH A 56 556 187 HOH HOH . T 7 HOH A 57 557 168 HOH HOH . T 7 HOH A 58 558 87 HOH HOH . T 7 HOH A 59 559 108 HOH HOH . T 7 HOH A 60 560 38 HOH HOH . T 7 HOH A 61 561 205 HOH HOH . T 7 HOH A 62 562 233 HOH HOH . T 7 HOH A 63 563 189 HOH HOH . T 7 HOH A 64 564 232 HOH HOH . T 7 HOH A 65 565 224 HOH HOH . T 7 HOH A 66 566 142 HOH HOH . U 7 HOH B 1 501 81 HOH HOH . U 7 HOH B 2 502 51 HOH HOH . U 7 HOH B 3 503 201 HOH HOH . U 7 HOH B 4 504 227 HOH HOH . U 7 HOH B 5 505 148 HOH HOH . U 7 HOH B 6 506 150 HOH HOH . U 7 HOH B 7 507 46 HOH HOH . U 7 HOH B 8 508 190 HOH HOH . U 7 HOH B 9 509 200 HOH HOH . U 7 HOH B 10 510 209 HOH HOH . U 7 HOH B 11 511 139 HOH HOH . U 7 HOH B 12 512 197 HOH HOH . U 7 HOH B 13 513 99 HOH HOH . U 7 HOH B 14 514 64 HOH HOH . U 7 HOH B 15 515 176 HOH HOH . U 7 HOH B 16 516 158 HOH HOH . U 7 HOH B 17 517 27 HOH HOH . U 7 HOH B 18 518 172 HOH HOH . U 7 HOH B 19 519 45 HOH HOH . U 7 HOH B 20 520 102 HOH HOH . U 7 HOH B 21 521 13 HOH HOH . U 7 HOH B 22 522 144 HOH HOH . U 7 HOH B 23 523 140 HOH HOH . U 7 HOH B 24 524 112 HOH HOH . U 7 HOH B 25 525 77 HOH HOH . U 7 HOH B 26 526 53 HOH HOH . U 7 HOH B 27 527 93 HOH HOH . U 7 HOH B 28 528 153 HOH HOH . U 7 HOH B 29 529 241 HOH HOH . U 7 HOH B 30 530 9 HOH HOH . U 7 HOH B 31 531 151 HOH HOH . U 7 HOH B 32 532 121 HOH HOH . U 7 HOH B 33 533 95 HOH HOH . U 7 HOH B 34 534 100 HOH HOH . U 7 HOH B 35 535 245 HOH HOH . U 7 HOH B 36 536 113 HOH HOH . U 7 HOH B 37 537 193 HOH HOH . U 7 HOH B 38 538 37 HOH HOH . U 7 HOH B 39 539 98 HOH HOH . U 7 HOH B 40 540 234 HOH HOH . U 7 HOH B 41 541 152 HOH HOH . U 7 HOH B 42 542 196 HOH HOH . U 7 HOH B 43 543 219 HOH HOH . U 7 HOH B 44 544 159 HOH HOH . U 7 HOH B 45 545 180 HOH HOH . U 7 HOH B 46 546 71 HOH HOH . U 7 HOH B 47 547 166 HOH HOH . U 7 HOH B 48 548 66 HOH HOH . U 7 HOH B 49 549 147 HOH HOH . U 7 HOH B 50 550 83 HOH HOH . U 7 HOH B 51 551 128 HOH HOH . U 7 HOH B 52 552 177 HOH HOH . U 7 HOH B 53 553 212 HOH HOH . U 7 HOH B 54 554 235 HOH HOH . U 7 HOH B 55 555 88 HOH HOH . U 7 HOH B 56 556 206 HOH HOH . U 7 HOH B 57 557 164 HOH HOH . V 7 HOH C 1 501 30 HOH HOH . V 7 HOH C 2 502 17 HOH HOH . V 7 HOH C 3 503 48 HOH HOH . V 7 HOH C 4 504 82 HOH HOH . V 7 HOH C 5 505 217 HOH HOH . V 7 HOH C 6 506 211 HOH HOH . V 7 HOH C 7 507 43 HOH HOH . V 7 HOH C 8 508 229 HOH HOH . V 7 HOH C 9 509 40 HOH HOH . V 7 HOH C 10 510 246 HOH HOH . V 7 HOH C 11 511 208 HOH HOH . V 7 HOH C 12 512 236 HOH HOH . V 7 HOH C 13 513 110 HOH HOH . V 7 HOH C 14 514 120 HOH HOH . V 7 HOH C 15 515 39 HOH HOH . V 7 HOH C 16 516 26 HOH HOH . V 7 HOH C 17 517 31 HOH HOH . V 7 HOH C 18 518 96 HOH HOH . V 7 HOH C 19 519 240 HOH HOH . V 7 HOH C 20 520 226 HOH HOH . V 7 HOH C 21 521 10 HOH HOH . V 7 HOH C 22 522 154 HOH HOH . V 7 HOH C 23 523 116 HOH HOH . V 7 HOH C 24 524 74 HOH HOH . V 7 HOH C 25 525 106 HOH HOH . V 7 HOH C 26 526 244 HOH HOH . V 7 HOH C 27 527 84 HOH HOH . V 7 HOH C 28 528 36 HOH HOH . V 7 HOH C 29 529 146 HOH HOH . V 7 HOH C 30 530 185 HOH HOH . V 7 HOH C 31 531 15 HOH HOH . V 7 HOH C 32 532 57 HOH HOH . V 7 HOH C 33 533 34 HOH HOH . V 7 HOH C 34 534 167 HOH HOH . V 7 HOH C 35 535 129 HOH HOH . V 7 HOH C 36 536 131 HOH HOH . V 7 HOH C 37 537 119 HOH HOH . V 7 HOH C 38 538 23 HOH HOH . V 7 HOH C 39 539 54 HOH HOH . V 7 HOH C 40 540 132 HOH HOH . V 7 HOH C 41 541 70 HOH HOH . V 7 HOH C 42 542 198 HOH HOH . V 7 HOH C 43 543 171 HOH HOH . V 7 HOH C 44 544 107 HOH HOH . V 7 HOH C 45 545 122 HOH HOH . V 7 HOH C 46 546 65 HOH HOH . V 7 HOH C 47 547 73 HOH HOH . V 7 HOH C 48 548 133 HOH HOH . V 7 HOH C 49 549 49 HOH HOH . V 7 HOH C 50 550 69 HOH HOH . V 7 HOH C 51 551 218 HOH HOH . V 7 HOH C 52 552 214 HOH HOH . W 7 HOH D 1 501 11 HOH HOH . W 7 HOH D 2 502 141 HOH HOH . W 7 HOH D 3 503 242 HOH HOH . W 7 HOH D 4 504 75 HOH HOH . W 7 HOH D 5 505 173 HOH HOH . W 7 HOH D 6 506 239 HOH HOH . W 7 HOH D 7 507 104 HOH HOH . W 7 HOH D 8 508 101 HOH HOH . W 7 HOH D 9 509 175 HOH HOH . W 7 HOH D 10 510 135 HOH HOH . W 7 HOH D 11 511 202 HOH HOH . W 7 HOH D 12 512 160 HOH HOH . W 7 HOH D 13 513 12 HOH HOH . W 7 HOH D 14 514 230 HOH HOH . W 7 HOH D 15 515 161 HOH HOH . W 7 HOH D 16 516 136 HOH HOH . W 7 HOH D 17 517 194 HOH HOH . W 7 HOH D 18 518 138 HOH HOH . W 7 HOH D 19 519 169 HOH HOH . W 7 HOH D 20 520 192 HOH HOH . W 7 HOH D 21 521 59 HOH HOH . W 7 HOH D 22 522 163 HOH HOH . W 7 HOH D 23 523 18 HOH HOH . W 7 HOH D 24 524 42 HOH HOH . W 7 HOH D 25 525 137 HOH HOH . W 7 HOH D 26 526 207 HOH HOH . W 7 HOH D 27 527 170 HOH HOH . W 7 HOH D 28 528 178 HOH HOH . W 7 HOH D 29 529 22 HOH HOH . W 7 HOH D 30 530 72 HOH HOH . W 7 HOH D 31 531 67 HOH HOH . W 7 HOH D 32 532 155 HOH HOH . W 7 HOH D 33 533 14 HOH HOH . W 7 HOH D 34 534 183 HOH HOH . W 7 HOH D 35 535 179 HOH HOH . W 7 HOH D 36 536 134 HOH HOH . W 7 HOH D 37 537 181 HOH HOH . W 7 HOH D 38 538 28 HOH HOH . W 7 HOH D 39 539 130 HOH HOH . W 7 HOH D 40 540 237 HOH HOH . W 7 HOH D 41 541 125 HOH HOH . W 7 HOH D 42 542 157 HOH HOH . W 7 HOH D 43 543 8 HOH HOH . W 7 HOH D 44 544 114 HOH HOH . W 7 HOH D 45 545 127 HOH HOH . W 7 HOH D 46 546 222 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id N _atom_site.label_entity_id 4 _atom_site.Cartn_x 8.143 _atom_site.Cartn_y 121.645 _atom_site.Cartn_z 11.87 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 72.34 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 403 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 42 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #