data_8RE7 # _model_server_result.job_id AcUcqxy3S9Qv3nTI3vKegw _model_server_result.datetime_utc '2024-12-19 08:49:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8re7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":802}' # _entry.id 8RE7 # _exptl.entry_id 8RE7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8RE7 _cell.length_a 50.107 _cell.length_b 91.041 _cell.length_c 124.903 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RE7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 327 A CYS 641 1_555 A SG CYS 334 A CYS 648 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 B SG CYS 16 B CYS 101 1_555 B SG CYS 25 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc1 A NE2 HIS 365 A HIS 679 1_555 D MN MN . A MN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc2 A NE2 HIS 411 A HIS 725 1_555 D MN MN . A MN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc3 C O1 AKG . A AKG 801 1_555 D MN MN . A MN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc4 C O5 AKG . A AKG 801 1_555 D MN MN . A MN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc5 D MN MN . A MN 802 1_555 E O HOH . A HOH 955 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc6 D MN MN . A MN 802 1_555 E O HOH . A HOH 968 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8RE7 _atom_sites.fract_transf_matrix[1][1] 0.019957 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010984 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008006 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 AKG A 1 801 802 AKG AKG . D 4 MN A 1 802 1 MN MN . E 5 HOH A 1 901 210 HOH HOH . E 5 HOH A 2 902 87 HOH HOH . E 5 HOH A 3 903 220 HOH HOH . E 5 HOH A 4 904 77 HOH HOH . E 5 HOH A 5 905 105 HOH HOH . E 5 HOH A 6 906 209 HOH HOH . E 5 HOH A 7 907 245 HOH HOH . E 5 HOH A 8 908 219 HOH HOH . E 5 HOH A 9 909 107 HOH HOH . E 5 HOH A 10 910 81 HOH HOH . E 5 HOH A 11 911 241 HOH HOH . E 5 HOH A 12 912 229 HOH HOH . E 5 HOH A 13 913 171 HOH HOH . E 5 HOH A 14 914 221 HOH HOH . E 5 HOH A 15 915 232 HOH HOH . E 5 HOH A 16 916 82 HOH HOH . E 5 HOH A 17 917 21 HOH HOH . E 5 HOH A 18 918 70 HOH HOH . E 5 HOH A 19 919 39 HOH HOH . E 5 HOH A 20 920 28 HOH HOH . E 5 HOH A 21 921 185 HOH HOH . E 5 HOH A 22 922 41 HOH HOH . E 5 HOH A 23 923 57 HOH HOH . E 5 HOH A 24 924 19 HOH HOH . E 5 HOH A 25 925 71 HOH HOH . E 5 HOH A 26 926 157 HOH HOH . E 5 HOH A 27 927 67 HOH HOH . E 5 HOH A 28 928 14 HOH HOH . E 5 HOH A 29 929 51 HOH HOH . E 5 HOH A 30 930 130 HOH HOH . E 5 HOH A 31 931 188 HOH HOH . E 5 HOH A 32 932 151 HOH HOH . E 5 HOH A 33 933 109 HOH HOH . E 5 HOH A 34 934 98 HOH HOH . E 5 HOH A 35 935 197 HOH HOH . E 5 HOH A 36 936 79 HOH HOH . E 5 HOH A 37 937 216 HOH HOH . E 5 HOH A 38 938 92 HOH HOH . E 5 HOH A 39 939 4 HOH HOH . E 5 HOH A 40 940 198 HOH HOH . E 5 HOH A 41 941 91 HOH HOH . E 5 HOH A 42 942 150 HOH HOH . E 5 HOH A 43 943 55 HOH HOH . E 5 HOH A 44 944 138 HOH HOH . E 5 HOH A 45 945 12 HOH HOH . E 5 HOH A 46 946 252 HOH HOH . E 5 HOH A 47 947 184 HOH HOH . E 5 HOH A 48 948 193 HOH HOH . E 5 HOH A 49 949 176 HOH HOH . E 5 HOH A 50 950 196 HOH HOH . E 5 HOH A 51 951 131 HOH HOH . E 5 HOH A 52 952 240 HOH HOH . E 5 HOH A 53 953 5 HOH HOH . E 5 HOH A 54 954 175 HOH HOH . E 5 HOH A 55 955 190 HOH HOH . E 5 HOH A 56 956 22 HOH HOH . E 5 HOH A 57 957 47 HOH HOH . E 5 HOH A 58 958 43 HOH HOH . E 5 HOH A 59 959 18 HOH HOH . E 5 HOH A 60 960 34 HOH HOH . E 5 HOH A 61 961 96 HOH HOH . E 5 HOH A 62 962 3 HOH HOH . E 5 HOH A 63 963 38 HOH HOH . E 5 HOH A 64 964 69 HOH HOH . E 5 HOH A 65 965 112 HOH HOH . E 5 HOH A 66 966 52 HOH HOH . E 5 HOH A 67 967 10 HOH HOH . E 5 HOH A 68 968 186 HOH HOH . E 5 HOH A 69 969 147 HOH HOH . E 5 HOH A 70 970 135 HOH HOH . E 5 HOH A 71 971 269 HOH HOH . E 5 HOH A 72 972 120 HOH HOH . E 5 HOH A 73 973 49 HOH HOH . E 5 HOH A 74 974 20 HOH HOH . E 5 HOH A 75 975 8 HOH HOH . E 5 HOH A 76 976 206 HOH HOH . E 5 HOH A 77 977 88 HOH HOH . E 5 HOH A 78 978 54 HOH HOH . E 5 HOH A 79 979 127 HOH HOH . E 5 HOH A 80 980 121 HOH HOH . E 5 HOH A 81 981 68 HOH HOH . E 5 HOH A 82 982 63 HOH HOH . E 5 HOH A 83 983 42 HOH HOH . E 5 HOH A 84 984 23 HOH HOH . E 5 HOH A 85 985 17 HOH HOH . E 5 HOH A 86 986 56 HOH HOH . E 5 HOH A 87 987 26 HOH HOH . E 5 HOH A 88 988 132 HOH HOH . E 5 HOH A 89 989 251 HOH HOH . E 5 HOH A 90 990 119 HOH HOH . E 5 HOH A 91 991 29 HOH HOH . E 5 HOH A 92 992 89 HOH HOH . E 5 HOH A 93 993 24 HOH HOH . E 5 HOH A 94 994 50 HOH HOH . E 5 HOH A 95 995 40 HOH HOH . E 5 HOH A 96 996 44 HOH HOH . E 5 HOH A 97 997 65 HOH HOH . E 5 HOH A 98 998 102 HOH HOH . E 5 HOH A 99 999 58 HOH HOH . E 5 HOH A 100 1000 123 HOH HOH . E 5 HOH A 101 1001 111 HOH HOH . E 5 HOH A 102 1002 166 HOH HOH . E 5 HOH A 103 1003 13 HOH HOH . E 5 HOH A 104 1004 95 HOH HOH . E 5 HOH A 105 1005 59 HOH HOH . E 5 HOH A 106 1006 261 HOH HOH . E 5 HOH A 107 1007 183 HOH HOH . E 5 HOH A 108 1008 226 HOH HOH . E 5 HOH A 109 1009 204 HOH HOH . E 5 HOH A 110 1010 93 HOH HOH . E 5 HOH A 111 1011 74 HOH HOH . E 5 HOH A 112 1012 11 HOH HOH . E 5 HOH A 113 1013 187 HOH HOH . E 5 HOH A 114 1014 6 HOH HOH . E 5 HOH A 115 1015 66 HOH HOH . E 5 HOH A 116 1016 90 HOH HOH . E 5 HOH A 117 1017 172 HOH HOH . E 5 HOH A 118 1018 78 HOH HOH . E 5 HOH A 119 1019 101 HOH HOH . E 5 HOH A 120 1020 267 HOH HOH . E 5 HOH A 121 1021 7 HOH HOH . E 5 HOH A 122 1022 33 HOH HOH . E 5 HOH A 123 1023 223 HOH HOH . E 5 HOH A 124 1024 113 HOH HOH . E 5 HOH A 125 1025 129 HOH HOH . E 5 HOH A 126 1026 86 HOH HOH . E 5 HOH A 127 1027 114 HOH HOH . E 5 HOH A 128 1028 30 HOH HOH . E 5 HOH A 129 1029 207 HOH HOH . E 5 HOH A 130 1030 1 HOH HOH . E 5 HOH A 131 1031 100 HOH HOH . E 5 HOH A 132 1032 174 HOH HOH . E 5 HOH A 133 1033 169 HOH HOH . E 5 HOH A 134 1034 250 HOH HOH . E 5 HOH A 135 1035 84 HOH HOH . E 5 HOH A 136 1036 16 HOH HOH . E 5 HOH A 137 1037 73 HOH HOH . E 5 HOH A 138 1038 118 HOH HOH . E 5 HOH A 139 1039 122 HOH HOH . E 5 HOH A 140 1040 277 HOH HOH . E 5 HOH A 141 1041 97 HOH HOH . E 5 HOH A 142 1042 133 HOH HOH . E 5 HOH A 143 1043 72 HOH HOH . E 5 HOH A 144 1044 126 HOH HOH . E 5 HOH A 145 1045 201 HOH HOH . E 5 HOH A 146 1046 230 HOH HOH . E 5 HOH A 147 1047 239 HOH HOH . E 5 HOH A 148 1048 177 HOH HOH . E 5 HOH A 149 1049 75 HOH HOH . E 5 HOH A 150 1050 192 HOH HOH . E 5 HOH A 151 1051 94 HOH HOH . E 5 HOH A 152 1052 162 HOH HOH . E 5 HOH A 153 1053 115 HOH HOH . E 5 HOH A 154 1054 117 HOH HOH . E 5 HOH A 155 1055 272 HOH HOH . E 5 HOH A 156 1056 35 HOH HOH . E 5 HOH A 157 1057 158 HOH HOH . E 5 HOH A 158 1058 262 HOH HOH . E 5 HOH A 159 1059 200 HOH HOH . E 5 HOH A 160 1060 266 HOH HOH . E 5 HOH A 161 1061 213 HOH HOH . E 5 HOH A 162 1062 228 HOH HOH . E 5 HOH A 163 1063 134 HOH HOH . E 5 HOH A 164 1064 212 HOH HOH . E 5 HOH A 165 1065 46 HOH HOH . E 5 HOH A 166 1066 170 HOH HOH . E 5 HOH A 167 1067 153 HOH HOH . E 5 HOH A 168 1068 161 HOH HOH . E 5 HOH A 169 1069 136 HOH HOH . E 5 HOH A 170 1070 125 HOH HOH . E 5 HOH A 171 1071 64 HOH HOH . E 5 HOH A 172 1072 246 HOH HOH . E 5 HOH A 173 1073 85 HOH HOH . E 5 HOH A 174 1074 191 HOH HOH . E 5 HOH A 175 1075 242 HOH HOH . E 5 HOH A 176 1076 253 HOH HOH . E 5 HOH A 177 1077 263 HOH HOH . E 5 HOH A 178 1078 155 HOH HOH . E 5 HOH A 179 1079 265 HOH HOH . E 5 HOH A 180 1080 106 HOH HOH . E 5 HOH A 181 1081 238 HOH HOH . E 5 HOH A 182 1082 15 HOH HOH . E 5 HOH A 183 1083 222 HOH HOH . E 5 HOH A 184 1084 32 HOH HOH . E 5 HOH A 185 1085 103 HOH HOH . E 5 HOH A 186 1086 62 HOH HOH . E 5 HOH A 187 1087 254 HOH HOH . E 5 HOH A 188 1088 168 HOH HOH . E 5 HOH A 189 1089 214 HOH HOH . E 5 HOH A 190 1090 80 HOH HOH . E 5 HOH A 191 1091 173 HOH HOH . E 5 HOH A 192 1092 225 HOH HOH . E 5 HOH A 193 1093 53 HOH HOH . E 5 HOH A 194 1094 264 HOH HOH . E 5 HOH A 195 1095 227 HOH HOH . E 5 HOH A 196 1096 260 HOH HOH . E 5 HOH A 197 1097 278 HOH HOH . E 5 HOH A 198 1098 233 HOH HOH . E 5 HOH A 199 1099 248 HOH HOH . E 5 HOH A 200 1100 146 HOH HOH . E 5 HOH A 201 1101 137 HOH HOH . E 5 HOH A 202 1102 194 HOH HOH . E 5 HOH A 203 1103 83 HOH HOH . E 5 HOH A 204 1104 99 HOH HOH . E 5 HOH A 205 1105 279 HOH HOH . E 5 HOH A 206 1106 244 HOH HOH . E 5 HOH A 207 1107 140 HOH HOH . E 5 HOH A 208 1108 231 HOH HOH . E 5 HOH A 209 1109 247 HOH HOH . E 5 HOH A 210 1110 257 HOH HOH . E 5 HOH A 211 1111 243 HOH HOH . E 5 HOH A 212 1112 108 HOH HOH . E 5 HOH A 213 1113 60 HOH HOH . E 5 HOH A 214 1114 182 HOH HOH . E 5 HOH A 215 1115 76 HOH HOH . E 5 HOH A 216 1116 274 HOH HOH . E 5 HOH A 217 1117 234 HOH HOH . E 5 HOH A 218 1118 273 HOH HOH . E 5 HOH A 219 1119 258 HOH HOH . E 5 HOH A 220 1120 145 HOH HOH . E 5 HOH A 221 1121 211 HOH HOH . E 5 HOH A 222 1122 276 HOH HOH . E 5 HOH A 223 1123 237 HOH HOH . E 5 HOH A 224 1124 128 HOH HOH . E 5 HOH A 225 1125 142 HOH HOH . E 5 HOH A 226 1126 179 HOH HOH . E 5 HOH A 227 1127 163 HOH HOH . E 5 HOH A 228 1128 202 HOH HOH . E 5 HOH A 229 1129 27 HOH HOH . E 5 HOH A 230 1130 152 HOH HOH . E 5 HOH A 231 1131 124 HOH HOH . E 5 HOH A 232 1132 215 HOH HOH . E 5 HOH A 233 1133 217 HOH HOH . E 5 HOH A 234 1134 255 HOH HOH . E 5 HOH A 235 1135 235 HOH HOH . E 5 HOH A 236 1136 141 HOH HOH . E 5 HOH A 237 1137 195 HOH HOH . E 5 HOH A 238 1138 148 HOH HOH . E 5 HOH A 239 1139 160 HOH HOH . E 5 HOH A 240 1140 143 HOH HOH . E 5 HOH A 241 1141 61 HOH HOH . E 5 HOH A 242 1142 189 HOH HOH . E 5 HOH A 243 1143 144 HOH HOH . E 5 HOH A 244 1144 48 HOH HOH . E 5 HOH A 245 1145 178 HOH HOH . E 5 HOH A 246 1146 208 HOH HOH . E 5 HOH A 247 1147 116 HOH HOH . E 5 HOH A 248 1148 36 HOH HOH . E 5 HOH A 249 1149 205 HOH HOH . E 5 HOH A 250 1150 164 HOH HOH . E 5 HOH A 251 1151 180 HOH HOH . E 5 HOH A 252 1152 154 HOH HOH . E 5 HOH A 253 1153 256 HOH HOH . E 5 HOH A 254 1154 110 HOH HOH . E 5 HOH A 255 1155 218 HOH HOH . E 5 HOH A 256 1156 259 HOH HOH . E 5 HOH A 257 1157 203 HOH HOH . E 5 HOH A 258 1158 181 HOH HOH . E 5 HOH A 259 1159 270 HOH HOH . E 5 HOH A 260 1160 271 HOH HOH . E 5 HOH A 261 1161 199 HOH HOH . E 5 HOH A 262 1162 165 HOH HOH . E 5 HOH A 263 1163 139 HOH HOH . E 5 HOH A 264 1164 275 HOH HOH . F 5 HOH B 1 201 249 HOH HOH . F 5 HOH B 2 202 224 HOH HOH . F 5 HOH B 3 203 45 HOH HOH . F 5 HOH B 4 204 31 HOH HOH . F 5 HOH B 5 205 2 HOH HOH . F 5 HOH B 6 206 9 HOH HOH . F 5 HOH B 7 207 37 HOH HOH . F 5 HOH B 8 208 104 HOH HOH . F 5 HOH B 9 209 25 HOH HOH . F 5 HOH B 10 210 159 HOH HOH . F 5 HOH B 11 211 236 HOH HOH . F 5 HOH B 12 212 268 HOH HOH . F 5 HOH B 13 213 149 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -9.43 _atom_site.Cartn_y -28.211 _atom_site.Cartn_z 43.288 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.55 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 802 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #