data_8REN
#
_model_server_result.job_id            OJMGIY6CRFe7mo0_hlVYcw 
_model_server_result.datetime_utc      '2025-01-10 08:01:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ren 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":304}' 
#
_entry.id    8REN 
#
_exptl.entry_id    8REN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              787.566 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIHYDROFLAVINE-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8REN 
_cell.length_a            53.683 
_cell.length_b            116.615 
_cell.length_c            140.569 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8REN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
#
_chem_comp.formula           'C27 H35 N9 O15 P2' 
_chem_comp.formula_weight    787.566 
_chem_comp.id                FDA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIHYDROFLAVINE-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FDA doub 83 n n 
PA O2A FDA sing 84 n n 
PA O5B FDA sing 85 n n 
PA O3P FDA sing 86 n n 
O2A HOA2 FDA sing 87 n n 
O5B C5B FDA sing 88 n n 
C5B C4B FDA sing 89 n n 
C5B H51A FDA sing 90 n n 
C5B H52A FDA sing 91 n n 
C4B O4B FDA sing 92 n n 
C4B C3B FDA sing 93 n n 
C4B H4B FDA sing 94 n n 
O4B C1B FDA sing 95 n n 
C3B O3B FDA sing 96 n n 
C3B C2B FDA sing 97 n n 
C3B H3B FDA sing 98 n n 
O3B HO3A FDA sing 99 n n 
C2B O2B FDA sing 100 n n 
C2B C1B FDA sing 101 n n 
C2B H2B FDA sing 102 n n 
O2B HO2A FDA sing 103 n n 
C1B N9A FDA sing 104 n n 
C1B H1B FDA sing 105 n n 
N9A C8A FDA sing 106 n y 
N9A C4A FDA sing 107 n y 
C8A N7A FDA doub 108 n y 
C8A H8A FDA sing 109 n n 
N7A C5A FDA sing 110 n y 
C5A C6A FDA sing 111 n y 
C5A C4A FDA doub 112 n y 
C6A N6A FDA sing 113 n n 
C6A N1A FDA doub 114 n y 
N6A H61A FDA sing 115 n n 
N6A H62A FDA sing 116 n n 
N1A C2A FDA sing 117 n y 
C2A N3A FDA doub 118 n y 
C2A H2A FDA sing 119 n n 
N3A C4A FDA sing 120 n y 
N1 C2 FDA sing 121 n n 
N1 C10 FDA sing 122 n n 
N1 HN1 FDA sing 123 n n 
C2 O2 FDA doub 124 n n 
C2 N3 FDA sing 125 n n 
N3 C4 FDA sing 126 n n 
N3 HN3 FDA sing 127 n n 
C4 O4 FDA doub 128 n n 
C4 C4X FDA sing 129 n n 
C4X N5 FDA sing 130 n n 
C4X C10 FDA doub 131 n n 
N5 C5X FDA sing 132 n n 
N5 HN5 FDA sing 133 n n 
C5X C6 FDA doub 134 n y 
C5X C9A FDA sing 135 n y 
C6 C7 FDA sing 136 n y 
C6 H6 FDA sing 137 n n 
C7 C7M FDA sing 138 n n 
C7 C8 FDA doub 139 n y 
C7M HM71 FDA sing 140 n n 
C7M HM72 FDA sing 141 n n 
C7M HM73 FDA sing 142 n n 
C8 C8M FDA sing 143 n n 
C8 C9 FDA sing 144 n y 
C8M HM81 FDA sing 145 n n 
C8M HM82 FDA sing 146 n n 
C8M HM83 FDA sing 147 n n 
C9 C9A FDA doub 148 n y 
C9 H9 FDA sing 149 n n 
C9A N10 FDA sing 150 n n 
N10 C10 FDA sing 151 n n 
N10 C1' FDA sing 152 n n 
C1' C2' FDA sing 153 n n 
C1' "H1'1" FDA sing 154 n n 
C1' "H1'2" FDA sing 155 n n 
C2' O2' FDA sing 156 n n 
C2' C3' FDA sing 157 n n 
C2' H2' FDA sing 158 n n 
O2' HO2' FDA sing 159 n n 
C3' O3' FDA sing 160 n n 
C3' C4' FDA sing 161 n n 
C3' H3' FDA sing 162 n n 
O3' HO3' FDA sing 163 n n 
C4' O4' FDA sing 164 n n 
C4' C5' FDA sing 165 n n 
C4' H4' FDA sing 166 n n 
O4' HO4' FDA sing 167 n n 
C5' O5' FDA sing 168 n n 
C5' "H5'1" FDA sing 169 n n 
C5' "H5'2" FDA sing 170 n n 
O5' P FDA sing 171 n n 
P O1P FDA doub 172 n n 
P O2P FDA sing 173 n n 
P O3P FDA sing 174 n n 
O2P HOP2 FDA sing 175 n n 
#
_atom_sites.entry_id                     8REN 
_atom_sites.fract_transf_matrix[1][1]    0.018628 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008575 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007114 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 PG4 A 1 301 301 PG4 PG4 . 
F 3 FDA A 1 302 2 FDA FDA . 
G 2 PG4 B 1 301 302 PG4 PG4 . 
H 4 PEG B 1 302 303 PEG PEG . 
I 4 PEG B 1 303 304 PEG PEG . 
J 3 FDA B 1 304 4 FDA FDA . 
K 3 FDA C 1 301 1 FDA FDA . 
L 3 FDA D 1 301 3 FDA FDA . 
M 5 HOH A 1 401 13 HOH HOH . 
M 5 HOH A 2 402 11 HOH HOH . 
M 5 HOH A 3 403 72 HOH HOH . 
M 5 HOH A 4 404 19 HOH HOH . 
M 5 HOH A 5 405 3 HOH HOH . 
M 5 HOH A 6 406 61 HOH HOH . 
M 5 HOH A 7 407 63 HOH HOH . 
M 5 HOH A 8 408 71 HOH HOH . 
M 5 HOH A 9 409 7 HOH HOH . 
M 5 HOH A 10 410 47 HOH HOH . 
M 5 HOH A 11 411 41 HOH HOH . 
M 5 HOH A 12 412 73 HOH HOH . 
M 5 HOH A 13 413 34 HOH HOH . 
M 5 HOH A 14 414 30 HOH HOH . 
M 5 HOH A 15 415 35 HOH HOH . 
M 5 HOH A 16 416 23 HOH HOH . 
M 5 HOH A 17 417 66 HOH HOH . 
M 5 HOH A 18 418 36 HOH HOH . 
M 5 HOH A 19 419 59 HOH HOH . 
M 5 HOH A 20 420 27 HOH HOH . 
M 5 HOH A 21 421 42 HOH HOH . 
M 5 HOH A 22 422 40 HOH HOH . 
M 5 HOH A 23 423 26 HOH HOH . 
M 5 HOH A 24 424 56 HOH HOH . 
M 5 HOH A 25 425 25 HOH HOH . 
N 5 HOH B 1 401 70 HOH HOH . 
N 5 HOH B 2 402 58 HOH HOH . 
N 5 HOH B 3 403 6 HOH HOH . 
N 5 HOH B 4 404 12 HOH HOH . 
N 5 HOH B 5 405 17 HOH HOH . 
N 5 HOH B 6 406 51 HOH HOH . 
N 5 HOH B 7 407 24 HOH HOH . 
N 5 HOH B 8 408 69 HOH HOH . 
N 5 HOH B 9 409 16 HOH HOH . 
N 5 HOH B 10 410 67 HOH HOH . 
N 5 HOH B 11 411 15 HOH HOH . 
N 5 HOH B 12 412 21 HOH HOH . 
N 5 HOH B 13 413 32 HOH HOH . 
N 5 HOH B 14 414 57 HOH HOH . 
N 5 HOH B 15 415 38 HOH HOH . 
O 5 HOH C 1 401 2 HOH HOH . 
O 5 HOH C 2 402 10 HOH HOH . 
O 5 HOH C 3 403 20 HOH HOH . 
O 5 HOH C 4 404 45 HOH HOH . 
O 5 HOH C 5 405 60 HOH HOH . 
O 5 HOH C 6 406 43 HOH HOH . 
O 5 HOH C 7 407 39 HOH HOH . 
O 5 HOH C 8 408 22 HOH HOH . 
O 5 HOH C 9 409 28 HOH HOH . 
O 5 HOH C 10 410 74 HOH HOH . 
O 5 HOH C 11 411 53 HOH HOH . 
O 5 HOH C 12 412 64 HOH HOH . 
O 5 HOH C 13 413 5 HOH HOH . 
O 5 HOH C 14 414 31 HOH HOH . 
O 5 HOH C 15 415 14 HOH HOH . 
O 5 HOH C 16 416 9 HOH HOH . 
O 5 HOH C 17 417 48 HOH HOH . 
O 5 HOH C 18 418 37 HOH HOH . 
O 5 HOH C 19 419 75 HOH HOH . 
O 5 HOH C 20 420 68 HOH HOH . 
P 5 HOH D 1 401 8 HOH HOH . 
P 5 HOH D 2 402 4 HOH HOH . 
P 5 HOH D 3 403 33 HOH HOH . 
P 5 HOH D 4 404 50 HOH HOH . 
P 5 HOH D 5 405 62 HOH HOH . 
P 5 HOH D 6 406 46 HOH HOH . 
P 5 HOH D 7 407 18 HOH HOH . 
P 5 HOH D 8 408 1 HOH HOH . 
P 5 HOH D 9 409 29 HOH HOH . 
P 5 HOH D 10 410 52 HOH HOH . 
P 5 HOH D 11 411 49 HOH HOH . 
P 5 HOH D 12 412 55 HOH HOH . 
P 5 HOH D 13 413 54 HOH HOH . 
P 5 HOH D 14 414 65 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FDA . . . J 3 0.838 -10.841 -21.956 1 39.31 ? PA FDA 304 B 1 
HETATM 2 O O1A FDA . . . J 3 1.444 -9.572 -22.454 1 40.06 ? O1A FDA 304 B 1 
HETATM 3 O O2A FDA . . . J 3 1.584 -11.633 -20.932 1 38.69 ? O2A FDA 304 B 1 
HETATM 4 O O5B FDA . . . J 3 0.528 -11.773 -23.217 1 38.24 ? O5B FDA 304 B 1 
HETATM 5 C C5B FDA . . . J 3 -0.196 -11.206 -24.337 1 37.3 ? C5B FDA 304 B 1 
HETATM 6 C C4B FDA . . . J 3 -0.901 -12.337 -25.038 1 36.66 ? C4B FDA 304 B 1 
HETATM 7 O O4B FDA . . . J 3 0.078 -13.322 -25.455 1 36.64 ? O4B FDA 304 B 1 
HETATM 8 C C3B FDA . . . J 3 -1.902 -13.112 -24.176 1 36.16 ? C3B FDA 304 B 1 
HETATM 9 O O3B FDA . . . J 3 -3.188 -12.508 -24.218 1 35.5 ? O3B FDA 304 B 1 
HETATM 10 C C2B FDA . . . J 3 -1.839 -14.524 -24.763 1 36.67 ? C2B FDA 304 B 1 
HETATM 11 O O2B FDA . . . J 3 -2.659 -14.628 -25.905 1 36.84 ? O2B FDA 304 B 1 
HETATM 12 C C1B FDA . . . J 3 -0.363 -14.624 -25.136 1 36.99 ? C1B FDA 304 B 1 
HETATM 13 N N9A FDA . . . J 3 0.581 -15.184 -24.181 1 37.94 ? N9A FDA 304 B 1 
HETATM 14 C C8A FDA . . . J 3 1.734 -14.563 -23.749 1 38.17 ? C8A FDA 304 B 1 
HETATM 15 N N7A FDA . . . J 3 2.51 -15.364 -23.057 1 38.14 ? N7A FDA 304 B 1 
HETATM 16 C C5A FDA . . . J 3 1.871 -16.599 -23.109 1 38.18 ? C5A FDA 304 B 1 
HETATM 17 C C6A FDA . . . J 3 2.209 -17.865 -22.593 1 37.81 ? C6A FDA 304 B 1 
HETATM 18 N N6A FDA . . . J 3 3.302 -18.101 -21.872 1 37.41 ? N6A FDA 304 B 1 
HETATM 19 N N1A FDA . . . J 3 1.337 -18.877 -22.817 1 37.8 ? N1A FDA 304 B 1 
HETATM 20 C C2A FDA . . . J 3 0.221 -18.625 -23.512 1 37.91 ? C2A FDA 304 B 1 
HETATM 21 N N3A FDA . . . J 3 -0.182 -17.489 -24.074 1 38.23 ? N3A FDA 304 B 1 
HETATM 22 C C4A FDA . . . J 3 0.699 -16.504 -23.832 1 38.27 ? C4A FDA 304 B 1 
HETATM 23 N N1 FDA . . . J 3 -3.16 -12.478 -12.292 1 41.52 ? N1 FDA 304 B 1 
HETATM 24 C C2 FDA . . . J 3 -2.649 -13.165 -11.224 1 41.56 ? C2 FDA 304 B 1 
HETATM 25 O O2 FDA . . . J 3 -1.447 -13.331 -11.123 1 41.49 ? O2 FDA 304 B 1 
HETATM 26 N N3 FDA . . . J 3 -3.538 -13.567 -10.254 1 41.53 ? N3 FDA 304 B 1 
HETATM 27 C C4 FDA . . . J 3 -4.909 -13.364 -10.295 1 41.49 ? C4 FDA 304 B 1 
HETATM 28 O O4 FDA . . . J 3 -5.617 -13.822 -9.397 1 41.45 ? O4 FDA 304 B 1 
HETATM 29 C C4X FDA . . . J 3 -5.42 -12.73 -11.437 1 41.6 ? C4X FDA 304 B 1 
HETATM 30 N N5 FDA . . . J 3 -6.758 -12.509 -11.592 1 41.54 ? N5 FDA 304 B 1 
HETATM 31 C C5X FDA . . . J 3 -7.288 -12.092 -12.803 1 41.66 ? C5X FDA 304 B 1 
HETATM 32 C C6 FDA . . . J 3 -8.658 -12.023 -12.993 1 41.68 ? C6 FDA 304 B 1 
HETATM 33 C C7 FDA . . . J 3 -9.19 -11.675 -14.207 1 41.54 ? C7 FDA 304 B 1 
HETATM 34 C C7M FDA . . . J 3 -10.681 -11.698 -14.41 1 41.42 ? C7M FDA 304 B 1 
HETATM 35 C C8 FDA . . . J 3 -8.31 -11.295 -15.277 1 41.34 ? C8 FDA 304 B 1 
HETATM 36 C C8M FDA . . . J 3 -8.865 -10.899 -16.618 1 41.29 ? C8M FDA 304 B 1 
HETATM 37 C C9 FDA . . . J 3 -6.956 -11.321 -15.075 1 41.32 ? C9 FDA 304 B 1 
HETATM 38 C C9A FDA . . . J 3 -6.42 -11.687 -13.84 1 41.49 ? C9A FDA 304 B 1 
HETATM 39 N N10 FDA . . . J 3 -5.019 -11.693 -13.603 1 41.44 ? N10 FDA 304 B 1 
HETATM 40 C C10 FDA . . . J 3 -4.515 -12.283 -12.448 1 41.52 ? C10 FDA 304 B 1 
HETATM 41 C C1' FDA . . . J 3 -4.087 -11.139 -14.619 1 41.55 ? C1' FDA 304 B 1 
HETATM 42 C C2' FDA . . . J 3 -3.565 -12.188 -15.595 1 41.48 ? C2' FDA 304 B 1 
HETATM 43 O O2' FDA . . . J 3 -2.99 -13.29 -14.894 1 41.17 ? O2' FDA 304 B 1 
HETATM 44 C C3' FDA . . . J 3 -2.529 -11.644 -16.587 1 42.09 ? C3' FDA 304 B 1 
HETATM 45 O O3' FDA . . . J 3 -1.347 -11.218 -15.929 1 42.24 ? O3' FDA 304 B 1 
HETATM 46 C C4' FDA . . . J 3 -2.978 -10.534 -17.538 1 42.65 ? C4' FDA 304 B 1 
HETATM 47 O O4' FDA . . . J 3 -4.299 -10.822 -18.013 1 43.16 ? O4' FDA 304 B 1 
HETATM 48 C C5' FDA . . . J 3 -1.994 -10.353 -18.674 1 42.16 ? C5' FDA 304 B 1 
HETATM 49 O O5' FDA . . . J 3 -2.656 -10.66 -19.923 1 41.69 ? O5' FDA 304 B 1 
HETATM 50 P P FDA . . . J 3 -1.892 -11.471 -21.066 1 40.9 ? P FDA 304 B 1 
HETATM 51 O O1P FDA . . . J 3 -1.409 -12.805 -20.612 1 40.2 ? O1P FDA 304 B 1 
HETATM 52 O O2P FDA . . . J 3 -2.854 -11.396 -22.204 1 42.62 ? O2P FDA 304 B 1 
HETATM 53 O O3P FDA . . . J 3 -0.638 -10.526 -21.407 1 40.12 ? O3P FDA 304 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           334 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           53 
#