data_8REO # _model_server_result.job_id YlKfwKNRWOKOkHeq32Davw _model_server_result.datetime_utc '2025-01-10 08:12:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8reo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":305}' # _entry.id 8REO # _exptl.entry_id 8REO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 787.566 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIHYDROFLAVINE-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8REO _cell.length_a 54.094 _cell.length_b 115.964 _cell.length_c 140.527 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8REO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 L N N ? 4 O N N ? 4 S N N # _chem_comp.formula 'C27 H35 N9 O15 P2' _chem_comp.formula_weight 787.566 _chem_comp.id FDA _chem_comp.mon_nstd_flag . _chem_comp.name 'DIHYDROFLAVINE-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FDA doub 83 n n PA O2A FDA sing 84 n n PA O5B FDA sing 85 n n PA O3P FDA sing 86 n n O2A HOA2 FDA sing 87 n n O5B C5B FDA sing 88 n n C5B C4B FDA sing 89 n n C5B H51A FDA sing 90 n n C5B H52A FDA sing 91 n n C4B O4B FDA sing 92 n n C4B C3B FDA sing 93 n n C4B H4B FDA sing 94 n n O4B C1B FDA sing 95 n n C3B O3B FDA sing 96 n n C3B C2B FDA sing 97 n n C3B H3B FDA sing 98 n n O3B HO3A FDA sing 99 n n C2B O2B FDA sing 100 n n C2B C1B FDA sing 101 n n C2B H2B FDA sing 102 n n O2B HO2A FDA sing 103 n n C1B N9A FDA sing 104 n n C1B H1B FDA sing 105 n n N9A C8A FDA sing 106 n y N9A C4A FDA sing 107 n y C8A N7A FDA doub 108 n y C8A H8A FDA sing 109 n n N7A C5A FDA sing 110 n y C5A C6A FDA sing 111 n y C5A C4A FDA doub 112 n y C6A N6A FDA sing 113 n n C6A N1A FDA doub 114 n y N6A H61A FDA sing 115 n n N6A H62A FDA sing 116 n n N1A C2A FDA sing 117 n y C2A N3A FDA doub 118 n y C2A H2A FDA sing 119 n n N3A C4A FDA sing 120 n y N1 C2 FDA sing 121 n n N1 C10 FDA sing 122 n n N1 HN1 FDA sing 123 n n C2 O2 FDA doub 124 n n C2 N3 FDA sing 125 n n N3 C4 FDA sing 126 n n N3 HN3 FDA sing 127 n n C4 O4 FDA doub 128 n n C4 C4X FDA sing 129 n n C4X N5 FDA sing 130 n n C4X C10 FDA doub 131 n n N5 C5X FDA sing 132 n n N5 HN5 FDA sing 133 n n C5X C6 FDA doub 134 n y C5X C9A FDA sing 135 n y C6 C7 FDA sing 136 n y C6 H6 FDA sing 137 n n C7 C7M FDA sing 138 n n C7 C8 FDA doub 139 n y C7M HM71 FDA sing 140 n n C7M HM72 FDA sing 141 n n C7M HM73 FDA sing 142 n n C8 C8M FDA sing 143 n n C8 C9 FDA sing 144 n y C8M HM81 FDA sing 145 n n C8M HM82 FDA sing 146 n n C8M HM83 FDA sing 147 n n C9 C9A FDA doub 148 n y C9 H9 FDA sing 149 n n C9A N10 FDA sing 150 n n N10 C10 FDA sing 151 n n N10 C1' FDA sing 152 n n C1' C2' FDA sing 153 n n C1' "H1'1" FDA sing 154 n n C1' "H1'2" FDA sing 155 n n C2' O2' FDA sing 156 n n C2' C3' FDA sing 157 n n C2' H2' FDA sing 158 n n O2' HO2' FDA sing 159 n n C3' O3' FDA sing 160 n n C3' C4' FDA sing 161 n n C3' H3' FDA sing 162 n n O3' HO3' FDA sing 163 n n C4' O4' FDA sing 164 n n C4' C5' FDA sing 165 n n C4' H4' FDA sing 166 n n O4' HO4' FDA sing 167 n n C5' O5' FDA sing 168 n n C5' "H5'1" FDA sing 169 n n C5' "H5'2" FDA sing 170 n n O5' P FDA sing 171 n n P O1P FDA doub 172 n n P O2P FDA sing 173 n n P O3P FDA sing 174 n n O2P HOP2 FDA sing 175 n n # _atom_sites.entry_id 8REO _atom_sites.fract_transf_matrix[1][1] 0.018486 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008623 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007116 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 UMP A 1 301 301 UMP UMP . F 3 P6G A 1 302 302 P6G P6G . G 4 FDA A 1 303 2 FDA FDA . H 5 PG4 B 1 301 302 PG4 PG4 . I 2 UMP B 1 302 304 UMP UMP . J 6 PEG B 1 303 305 PEG PEG . K 7 PGE B 1 304 306 PGE PGE . L 4 FDA B 1 305 4 FDA FDA . M 2 UMP C 1 301 301 UMP UMP . N 6 PEG C 1 302 302 PEG PEG . O 4 FDA C 1 303 1 FDA FDA . P 6 PEG C 1 304 5 PEG PEG . Q 2 UMP D 1 301 301 UMP UMP . R 5 PG4 D 1 302 302 PG4 PG4 . S 4 FDA D 1 303 3 FDA FDA . T 8 HOH A 1 401 10 HOH HOH . T 8 HOH A 2 402 46 HOH HOH . T 8 HOH A 3 403 33 HOH HOH . T 8 HOH A 4 404 21 HOH HOH . T 8 HOH A 5 405 66 HOH HOH . T 8 HOH A 6 406 50 HOH HOH . T 8 HOH A 7 407 104 HOH HOH . T 8 HOH A 8 408 65 HOH HOH . T 8 HOH A 9 409 28 HOH HOH . T 8 HOH A 10 410 97 HOH HOH . T 8 HOH A 11 411 70 HOH HOH . T 8 HOH A 12 412 24 HOH HOH . T 8 HOH A 13 413 30 HOH HOH . T 8 HOH A 14 414 39 HOH HOH . T 8 HOH A 15 415 16 HOH HOH . T 8 HOH A 16 416 26 HOH HOH . T 8 HOH A 17 417 73 HOH HOH . T 8 HOH A 18 418 88 HOH HOH . T 8 HOH A 19 419 41 HOH HOH . T 8 HOH A 20 420 96 HOH HOH . T 8 HOH A 21 421 72 HOH HOH . U 8 HOH B 1 401 27 HOH HOH . U 8 HOH B 2 402 94 HOH HOH . U 8 HOH B 3 403 9 HOH HOH . U 8 HOH B 4 404 3 HOH HOH . U 8 HOH B 5 405 77 HOH HOH . U 8 HOH B 6 406 95 HOH HOH . U 8 HOH B 7 407 89 HOH HOH . U 8 HOH B 8 408 35 HOH HOH . U 8 HOH B 9 409 57 HOH HOH . U 8 HOH B 10 410 55 HOH HOH . U 8 HOH B 11 411 106 HOH HOH . U 8 HOH B 12 412 43 HOH HOH . U 8 HOH B 13 413 32 HOH HOH . U 8 HOH B 14 414 108 HOH HOH . U 8 HOH B 15 415 4 HOH HOH . U 8 HOH B 16 416 18 HOH HOH . U 8 HOH B 17 417 61 HOH HOH . U 8 HOH B 18 418 105 HOH HOH . U 8 HOH B 19 419 11 HOH HOH . U 8 HOH B 20 420 12 HOH HOH . U 8 HOH B 21 421 2 HOH HOH . U 8 HOH B 22 422 84 HOH HOH . U 8 HOH B 23 423 75 HOH HOH . U 8 HOH B 24 424 93 HOH HOH . U 8 HOH B 25 425 71 HOH HOH . U 8 HOH B 26 426 74 HOH HOH . V 8 HOH C 1 401 48 HOH HOH . V 8 HOH C 2 402 100 HOH HOH . V 8 HOH C 3 403 76 HOH HOH . V 8 HOH C 4 404 8 HOH HOH . V 8 HOH C 5 405 92 HOH HOH . V 8 HOH C 6 406 6 HOH HOH . V 8 HOH C 7 407 5 HOH HOH . V 8 HOH C 8 408 56 HOH HOH . V 8 HOH C 9 409 98 HOH HOH . V 8 HOH C 10 410 99 HOH HOH . V 8 HOH C 11 411 63 HOH HOH . V 8 HOH C 12 412 78 HOH HOH . V 8 HOH C 13 413 54 HOH HOH . V 8 HOH C 14 414 15 HOH HOH . V 8 HOH C 15 415 14 HOH HOH . V 8 HOH C 16 416 86 HOH HOH . V 8 HOH C 17 417 91 HOH HOH . V 8 HOH C 18 418 82 HOH HOH . V 8 HOH C 19 419 85 HOH HOH . V 8 HOH C 20 420 79 HOH HOH . V 8 HOH C 21 421 23 HOH HOH . V 8 HOH C 22 422 34 HOH HOH . V 8 HOH C 23 423 83 HOH HOH . V 8 HOH C 24 424 17 HOH HOH . V 8 HOH C 25 425 53 HOH HOH . V 8 HOH C 26 426 103 HOH HOH . V 8 HOH C 27 427 67 HOH HOH . V 8 HOH C 28 428 36 HOH HOH . V 8 HOH C 29 429 81 HOH HOH . V 8 HOH C 30 430 52 HOH HOH . V 8 HOH C 31 431 45 HOH HOH . V 8 HOH C 32 432 38 HOH HOH . W 8 HOH D 1 401 7 HOH HOH . W 8 HOH D 2 402 1 HOH HOH . W 8 HOH D 3 403 40 HOH HOH . W 8 HOH D 4 404 80 HOH HOH . W 8 HOH D 5 405 22 HOH HOH . W 8 HOH D 6 406 20 HOH HOH . W 8 HOH D 7 407 101 HOH HOH . W 8 HOH D 8 408 25 HOH HOH . W 8 HOH D 9 409 49 HOH HOH . W 8 HOH D 10 410 31 HOH HOH . W 8 HOH D 11 411 68 HOH HOH . W 8 HOH D 12 412 58 HOH HOH . W 8 HOH D 13 413 13 HOH HOH . W 8 HOH D 14 414 51 HOH HOH . W 8 HOH D 15 415 60 HOH HOH . W 8 HOH D 16 416 64 HOH HOH . W 8 HOH D 17 417 59 HOH HOH . W 8 HOH D 18 418 29 HOH HOH . W 8 HOH D 19 419 87 HOH HOH . W 8 HOH D 20 420 19 HOH HOH . W 8 HOH D 21 421 42 HOH HOH . W 8 HOH D 22 422 47 HOH HOH . W 8 HOH D 23 423 62 HOH HOH . W 8 HOH D 24 424 69 HOH HOH . W 8 HOH D 25 425 90 HOH HOH . W 8 HOH D 26 426 107 HOH HOH . W 8 HOH D 27 427 37 HOH HOH . W 8 HOH D 28 428 102 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FDA . . . L 4 1.143 -10.535 -21.982 1 33.64 ? PA FDA 305 B 1 HETATM 2 O O1A FDA . . . L 4 1.754 -9.31 -22.576 1 32.77 ? O1A FDA 305 B 1 HETATM 3 O O2A FDA . . . L 4 1.957 -11.339 -21.022 1 33.07 ? O2A FDA 305 B 1 HETATM 4 O O5B FDA . . . L 4 0.649 -11.499 -23.163 1 33.35 ? O5B FDA 305 B 1 HETATM 5 C C5B FDA . . . L 4 -0.024 -10.921 -24.303 1 33.2 ? C5B FDA 305 B 1 HETATM 6 C C4B FDA . . . L 4 -0.683 -12.053 -25.04 1 32.87 ? C4B FDA 305 B 1 HETATM 7 O O4B FDA . . . L 4 0.335 -13.023 -25.397 1 32.72 ? O4B FDA 305 B 1 HETATM 8 C C3B FDA . . . L 4 -1.69 -12.839 -24.199 1 32.75 ? C3B FDA 305 B 1 HETATM 9 O O3B FDA . . . L 4 -3.003 -12.302 -24.289 1 33.05 ? O3B FDA 305 B 1 HETATM 10 C C2B FDA . . . L 4 -1.592 -14.249 -24.782 1 32.53 ? C2B FDA 305 B 1 HETATM 11 O O2B FDA . . . L 4 -2.393 -14.346 -25.938 1 32.49 ? O2B FDA 305 B 1 HETATM 12 C C1B FDA . . . L 4 -0.104 -14.334 -25.112 1 32.24 ? C1B FDA 305 B 1 HETATM 13 N N9A FDA . . . L 4 0.808 -14.914 -24.141 1 31.99 ? N9A FDA 305 B 1 HETATM 14 C C8A FDA . . . L 4 1.949 -14.308 -23.675 1 32.22 ? C8A FDA 305 B 1 HETATM 15 N N7A FDA . . . L 4 2.695 -15.113 -22.951 1 32.29 ? N7A FDA 305 B 1 HETATM 16 C C5A FDA . . . L 4 2.058 -16.345 -23.039 1 32.33 ? C5A FDA 305 B 1 HETATM 17 C C6A FDA . . . L 4 2.372 -17.613 -22.512 1 32.48 ? C6A FDA 305 B 1 HETATM 18 N N6A FDA . . . L 4 3.454 -17.849 -21.773 1 32.83 ? N6A FDA 305 B 1 HETATM 19 N N1A FDA . . . L 4 1.535 -18.639 -22.81 1 32.05 ? N1A FDA 305 B 1 HETATM 20 C C2A FDA . . . L 4 0.434 -18.374 -23.526 1 32.01 ? C2A FDA 305 B 1 HETATM 21 N N3A FDA . . . L 4 0.045 -17.227 -24.081 1 32.11 ? N3A FDA 305 B 1 HETATM 22 C C4A FDA . . . L 4 0.906 -16.237 -23.791 1 32.15 ? C4A FDA 305 B 1 HETATM 23 N N1 FDA . . . L 4 -2.368 -11.849 -12.064 1 37.75 ? N1 FDA 305 B 1 HETATM 24 C C2 FDA . . . L 4 -2.101 -12.621 -10.97 1 37.92 ? C2 FDA 305 B 1 HETATM 25 O O2 FDA . . . L 4 -1.094 -13.304 -10.938 1 37.7 ? O2 FDA 305 B 1 HETATM 26 N N3 FDA . . . L 4 -2.997 -12.57 -9.932 1 38.55 ? N3 FDA 305 B 1 HETATM 27 C C4 FDA . . . L 4 -4.158 -11.813 -9.915 1 39.01 ? C4 FDA 305 B 1 HETATM 28 O O4 FDA . . . L 4 -4.9 -11.861 -8.93 1 39.91 ? O4 FDA 305 B 1 HETATM 29 C C4X FDA . . . L 4 -4.404 -11.011 -11.04 1 38.39 ? C4X FDA 305 B 1 HETATM 30 N N5 FDA . . . L 4 -5.499 -10.193 -11.112 1 37.96 ? N5 FDA 305 B 1 HETATM 31 C C5X FDA . . . L 4 -5.719 -9.35 -12.189 1 37.21 ? C5X FDA 305 B 1 HETATM 32 C C6 FDA . . . L 4 -6.805 -8.493 -12.211 1 36.71 ? C6 FDA 305 B 1 HETATM 33 C C7 FDA . . . L 4 -7.028 -7.66 -13.278 1 36.45 ? C7 FDA 305 B 1 HETATM 34 C C7M FDA . . . L 4 -8.222 -6.745 -13.282 1 36.09 ? C7M FDA 305 B 1 HETATM 35 C C8 FDA . . . L 4 -6.12 -7.682 -14.392 1 36.42 ? C8 FDA 305 B 1 HETATM 36 C C8M FDA . . . L 4 -6.334 -6.786 -15.583 1 36.21 ? C8M FDA 305 B 1 HETATM 37 C C9 FDA . . . L 4 -5.046 -8.531 -14.366 1 36.43 ? C9 FDA 305 B 1 HETATM 38 C C9A FDA . . . L 4 -4.809 -9.357 -13.27 1 36.98 ? C9A FDA 305 B 1 HETATM 39 N N10 FDA . . . L 4 -3.686 -10.228 -13.222 1 37.39 ? N10 FDA 305 B 1 HETATM 40 C C10 FDA . . . L 4 -3.504 -11.076 -12.143 1 37.93 ? C10 FDA 305 B 1 HETATM 41 C C1' FDA . . . L 4 -2.65 -10.173 -14.282 1 37.14 ? C1' FDA 305 B 1 HETATM 42 C C2' FDA . . . L 4 -2.933 -11.147 -15.425 1 36.97 ? C2' FDA 305 B 1 HETATM 43 O O2' FDA . . . L 4 -2.948 -12.485 -14.948 1 37.1 ? O2' FDA 305 B 1 HETATM 44 C C3' FDA . . . L 4 -1.925 -11.033 -16.572 1 36.73 ? C3' FDA 305 B 1 HETATM 45 O O3' FDA . . . L 4 -0.639 -11.388 -16.089 1 36.76 ? O3' FDA 305 B 1 HETATM 46 C C4' FDA . . . L 4 -1.834 -9.662 -17.25 1 36.53 ? C4' FDA 305 B 1 HETATM 47 O O4' FDA . . . L 4 -3.156 -9.17 -17.479 1 36.5 ? O4' FDA 305 B 1 HETATM 48 C C5' FDA . . . L 4 -1.095 -9.738 -18.564 1 36.45 ? C5' FDA 305 B 1 HETATM 49 O O5' FDA . . . L 4 -2.032 -10.278 -19.529 1 35.94 ? O5' FDA 305 B 1 HETATM 50 P P FDA . . . L 4 -1.478 -11.071 -20.795 1 35.14 ? P FDA 305 B 1 HETATM 51 O O1P FDA . . . L 4 -0.917 -12.394 -20.407 1 34.98 ? O1P FDA 305 B 1 HETATM 52 O O2P FDA . . . L 4 -2.594 -10.988 -21.782 1 36.37 ? O2P FDA 305 B 1 HETATM 53 O O3P FDA . . . L 4 -0.257 -10.159 -21.292 1 34.76 ? O3P FDA 305 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 53 #