data_8REP # _model_server_result.job_id K4xdfxcsWQV3JR7wQu_QRA _model_server_result.datetime_utc '2025-01-07 17:54:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8rep # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":304}' # _entry.id 8REP # _exptl.entry_id 8REP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8REP _cell.length_a 54.919 _cell.length_b 116.801 _cell.length_c 142.754 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8REP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 J N N ? 4 L N N ? 4 Q N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 8REP _atom_sites.fract_transf_matrix[1][1] 0.018209 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008562 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007005 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PG4 A 1 301 301 PG4 PG4 . F 2 PG4 A 1 302 302 PG4 PG4 . G 3 PGE A 1 303 303 PGE PGE . H 4 FAD A 1 304 2 FAD FAD . I 3 PGE B 1 301 301 PGE PGE . J 4 FAD B 1 302 1 FAD FAD . K 2 PG4 C 1 301 301 PG4 PG4 . L 4 FAD C 1 302 3 FAD FAD . M 3 PGE D 1 301 301 PGE PGE . N 5 PEG D 1 302 302 PEG PEG . O 3 PGE D 1 303 303 PGE PGE . P 5 PEG D 1 304 304 PEG PEG . Q 4 FAD D 1 305 4 FAD FAD . R 5 PEG D 1 306 5 PEG PEG . S 6 HOH A 1 401 61 HOH HOH . S 6 HOH A 2 402 6 HOH HOH . S 6 HOH A 3 403 72 HOH HOH . S 6 HOH A 4 404 53 HOH HOH . S 6 HOH A 5 405 42 HOH HOH . S 6 HOH A 6 406 37 HOH HOH . S 6 HOH A 7 407 62 HOH HOH . S 6 HOH A 8 408 39 HOH HOH . S 6 HOH A 9 409 24 HOH HOH . S 6 HOH A 10 410 49 HOH HOH . S 6 HOH A 11 411 64 HOH HOH . S 6 HOH A 12 412 16 HOH HOH . S 6 HOH A 13 413 97 HOH HOH . S 6 HOH A 14 414 40 HOH HOH . S 6 HOH A 15 415 9 HOH HOH . S 6 HOH A 16 416 94 HOH HOH . S 6 HOH A 17 417 55 HOH HOH . S 6 HOH A 18 418 29 HOH HOH . S 6 HOH A 19 419 12 HOH HOH . S 6 HOH A 20 420 66 HOH HOH . S 6 HOH A 21 421 80 HOH HOH . S 6 HOH A 22 422 1 HOH HOH . S 6 HOH A 23 423 85 HOH HOH . S 6 HOH A 24 424 73 HOH HOH . T 6 HOH B 1 401 21 HOH HOH . T 6 HOH B 2 402 56 HOH HOH . T 6 HOH B 3 403 84 HOH HOH . T 6 HOH B 4 404 19 HOH HOH . T 6 HOH B 5 405 15 HOH HOH . T 6 HOH B 6 406 46 HOH HOH . T 6 HOH B 7 407 81 HOH HOH . T 6 HOH B 8 408 59 HOH HOH . T 6 HOH B 9 409 95 HOH HOH . T 6 HOH B 10 410 50 HOH HOH . T 6 HOH B 11 411 23 HOH HOH . T 6 HOH B 12 412 96 HOH HOH . T 6 HOH B 13 413 71 HOH HOH . T 6 HOH B 14 414 43 HOH HOH . T 6 HOH B 15 415 93 HOH HOH . T 6 HOH B 16 416 4 HOH HOH . T 6 HOH B 17 417 101 HOH HOH . T 6 HOH B 18 418 44 HOH HOH . T 6 HOH B 19 419 67 HOH HOH . T 6 HOH B 20 420 98 HOH HOH . T 6 HOH B 21 421 7 HOH HOH . T 6 HOH B 22 422 51 HOH HOH . U 6 HOH C 1 401 10 HOH HOH . U 6 HOH C 2 402 54 HOH HOH . U 6 HOH C 3 403 31 HOH HOH . U 6 HOH C 4 404 30 HOH HOH . U 6 HOH C 5 405 45 HOH HOH . U 6 HOH C 6 406 88 HOH HOH . U 6 HOH C 7 407 77 HOH HOH . U 6 HOH C 8 408 20 HOH HOH . U 6 HOH C 9 409 86 HOH HOH . U 6 HOH C 10 410 34 HOH HOH . U 6 HOH C 11 411 17 HOH HOH . U 6 HOH C 12 412 65 HOH HOH . U 6 HOH C 13 413 57 HOH HOH . U 6 HOH C 14 414 48 HOH HOH . U 6 HOH C 15 415 41 HOH HOH . U 6 HOH C 16 416 8 HOH HOH . U 6 HOH C 17 417 69 HOH HOH . U 6 HOH C 18 418 32 HOH HOH . U 6 HOH C 19 419 99 HOH HOH . U 6 HOH C 20 420 91 HOH HOH . U 6 HOH C 21 421 28 HOH HOH . U 6 HOH C 22 422 14 HOH HOH . U 6 HOH C 23 423 92 HOH HOH . U 6 HOH C 24 424 90 HOH HOH . U 6 HOH C 25 425 100 HOH HOH . U 6 HOH C 26 426 33 HOH HOH . U 6 HOH C 27 427 3 HOH HOH . U 6 HOH C 28 428 87 HOH HOH . U 6 HOH C 29 429 79 HOH HOH . U 6 HOH C 30 430 82 HOH HOH . U 6 HOH C 31 431 83 HOH HOH . V 6 HOH D 1 401 35 HOH HOH . V 6 HOH D 2 402 38 HOH HOH . V 6 HOH D 3 403 11 HOH HOH . V 6 HOH D 4 404 25 HOH HOH . V 6 HOH D 5 405 47 HOH HOH . V 6 HOH D 6 406 68 HOH HOH . V 6 HOH D 7 407 89 HOH HOH . V 6 HOH D 8 408 58 HOH HOH . V 6 HOH D 9 409 5 HOH HOH . V 6 HOH D 10 410 36 HOH HOH . V 6 HOH D 11 411 75 HOH HOH . V 6 HOH D 12 412 63 HOH HOH . V 6 HOH D 13 413 26 HOH HOH . V 6 HOH D 14 414 2 HOH HOH . V 6 HOH D 15 415 70 HOH HOH . V 6 HOH D 16 416 52 HOH HOH . V 6 HOH D 17 417 18 HOH HOH . V 6 HOH D 18 418 60 HOH HOH . V 6 HOH D 19 419 74 HOH HOH . V 6 HOH D 20 420 27 HOH HOH . V 6 HOH D 21 421 13 HOH HOH . V 6 HOH D 22 422 76 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . H 4 13.867 -13.404 -21.034 0.9 32.65 ? PA FAD 304 A 1 HETATM 2 O O1A FAD . . . H 4 13.082 -12.134 -21.067 0.9 31.46 ? O1A FAD 304 A 1 HETATM 3 O O2A FAD . . . H 4 13.267 -14.628 -20.421 0.9 32.59 ? O2A FAD 304 A 1 HETATM 4 O O5B FAD . . . H 4 14.36 -13.759 -22.509 0.9 32.41 ? O5B FAD 304 A 1 HETATM 5 C C5B FAD . . . H 4 15.052 -14.995 -22.775 0.9 32.18 ? C5B FAD 304 A 1 HETATM 6 C C4B FAD . . . H 4 15.676 -14.85 -24.138 0.9 32.45 ? C4B FAD 304 A 1 HETATM 7 O O4B FAD . . . H 4 14.623 -14.567 -25.093 0.9 32.21 ? O4B FAD 304 A 1 HETATM 8 C C3B FAD . . . H 4 16.637 -13.667 -24.27 0.9 32.64 ? C3B FAD 304 A 1 HETATM 9 O O3B FAD . . . H 4 17.954 -14.017 -23.87 0.9 33.15 ? O3B FAD 304 A 1 HETATM 10 C C2B FAD . . . H 4 16.498 -13.278 -25.742 0.9 32.61 ? C2B FAD 304 A 1 HETATM 11 O O2B FAD . . . H 4 17.254 -14.133 -26.563 0.9 33.14 ? O2B FAD 304 A 1 HETATM 12 C C1B FAD . . . H 4 15.018 -13.553 -25.988 0.9 32 ? C1B FAD 304 A 1 HETATM 13 N N9A FAD . . . H 4 14.068 -12.449 -25.9 0.9 30.87 ? N9A FAD 304 A 1 HETATM 14 C C8A FAD . . . H 4 12.899 -12.452 -25.171 0.9 30.29 ? C8A FAD 304 A 1 HETATM 15 N N7A FAD . . . H 4 12.116 -11.442 -25.464 0.9 29.75 ? N7A FAD 304 A 1 HETATM 16 C C5A FAD . . . H 4 12.766 -10.79 -26.506 0.9 30.06 ? C5A FAD 304 A 1 HETATM 17 C C6A FAD . . . H 4 12.451 -9.635 -27.249 0.9 29.18 ? C6A FAD 304 A 1 HETATM 18 N N6A FAD . . . H 4 11.329 -8.935 -27.086 0.9 28.76 ? N6A FAD 304 A 1 HETATM 19 N N1A FAD . . . H 4 13.326 -9.263 -28.215 0.9 28.9 ? N1A FAD 304 A 1 HETATM 20 C C2A FAD . . . H 4 14.438 -9.989 -28.392 0.9 29.33 ? C2A FAD 304 A 1 HETATM 21 N N3A FAD . . . H 4 14.82 -11.107 -27.779 0.9 29.89 ? N3A FAD 304 A 1 HETATM 22 C C4A FAD . . . H 4 13.948 -11.434 -26.81 0.9 30.31 ? C4A FAD 304 A 1 HETATM 23 N N1 FAD . . . H 4 17.175 -4.611 -16.335 0.9 38.72 ? N1 FAD 304 A 1 HETATM 24 C C2 FAD . . . H 4 16.918 -3.292 -16.259 0.9 39.07 ? C2 FAD 304 A 1 HETATM 25 O O2 FAD . . . H 4 15.917 -2.828 -16.79 0.9 39.06 ? O2 FAD 304 A 1 HETATM 26 N N3 FAD . . . H 4 17.7 -2.436 -15.532 0.9 39.41 ? N3 FAD 304 A 1 HETATM 27 C C4 FAD . . . H 4 18.866 -2.86 -14.935 0.9 39.66 ? C4 FAD 304 A 1 HETATM 28 O O4 FAD . . . H 4 19.606 -2.047 -14.399 0.9 39.71 ? O4 FAD 304 A 1 HETATM 29 C C4X FAD . . . H 4 19.169 -4.247 -14.992 0.9 39.12 ? C4X FAD 304 A 1 HETATM 30 N N5 FAD . . . H 4 20.26 -4.685 -14.416 0.9 39.12 ? N5 FAD 304 A 1 HETATM 31 C C5X FAD . . . H 4 20.529 -6.029 -14.505 0.9 38.62 ? C5X FAD 304 A 1 HETATM 32 C C6 FAD . . . H 4 21.697 -6.519 -13.89 0.9 38.26 ? C6 FAD 304 A 1 HETATM 33 C C7 FAD . . . H 4 22.02 -7.857 -13.92 0.9 38.05 ? C7 FAD 304 A 1 HETATM 34 C C7M FAD . . . H 4 23.284 -8.345 -13.259 0.9 37.46 ? C7M FAD 304 A 1 HETATM 35 C C8 FAD . . . H 4 21.151 -8.766 -14.584 0.9 38.2 ? C8 FAD 304 A 1 HETATM 36 C C8M FAD . . . H 4 21.472 -10.237 -14.638 0.9 37.96 ? C8M FAD 304 A 1 HETATM 37 C C9 FAD . . . H 4 19.981 -8.301 -15.148 0.9 38.26 ? C9 FAD 304 A 1 HETATM 38 C C9A FAD . . . H 4 19.656 -6.935 -15.142 0.9 38.26 ? C9A FAD 304 A 1 HETATM 39 N N10 FAD . . . H 4 18.554 -6.414 -15.823 0.9 38.1 ? N10 FAD 304 A 1 HETATM 40 C C10 FAD . . . H 4 18.256 -5.069 -15.743 0.9 38.63 ? C10 FAD 304 A 1 HETATM 41 C C1' FAD . . . H 4 17.547 -7.32 -16.401 0.9 36.9 ? C1' FAD 304 A 1 HETATM 42 C C2' FAD . . . H 4 17.896 -7.787 -17.808 0.9 36.06 ? C2' FAD 304 A 1 HETATM 43 O O2' FAD . . . H 4 17.955 -6.667 -18.676 0.9 36.06 ? O2' FAD 304 A 1 HETATM 44 C C3' FAD . . . H 4 16.902 -8.815 -18.372 0.9 35.38 ? C3' FAD 304 A 1 HETATM 45 O O3' FAD . . . H 4 15.612 -8.209 -18.457 0.9 35.28 ? O3' FAD 304 A 1 HETATM 46 C C4' FAD . . . H 4 16.756 -10.111 -17.571 0.9 34.8 ? C4' FAD 304 A 1 HETATM 47 O O4' FAD . . . H 4 18.037 -10.572 -17.139 0.9 34.87 ? O4' FAD 304 A 1 HETATM 48 C C5' FAD . . . H 4 16.077 -11.2 -18.36 0.9 35.09 ? C5' FAD 304 A 1 HETATM 49 O O5' FAD . . . H 4 17.014 -11.705 -19.344 0.9 35.07 ? O5' FAD 304 A 1 HETATM 50 P P FAD . . . H 4 16.44 -12.092 -20.783 0.9 35.14 ? P FAD 304 A 1 HETATM 51 O O1P FAD . . . H 4 15.822 -10.882 -21.4 0.9 35.05 ? O1P FAD 304 A 1 HETATM 52 O O2P FAD . . . H 4 17.511 -12.817 -21.527 0.9 36 ? O2P FAD 304 A 1 HETATM 53 O O3P FAD . . . H 4 15.279 -13.103 -20.344 0.9 34.14 ? O3P FAD 304 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 53 #