data_8REP # _model_server_result.job_id I_IP-5PUUm96XoQXTvnqRA _model_server_result.datetime_utc '2025-01-07 18:16:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8rep # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":305}' # _entry.id 8REP # _exptl.entry_id 8REP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8REP _cell.length_a 54.919 _cell.length_b 116.801 _cell.length_c 142.754 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8REP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 J N N ? 4 L N N ? 4 Q N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 8REP _atom_sites.fract_transf_matrix[1][1] 0.018209 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008562 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007005 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PG4 A 1 301 301 PG4 PG4 . F 2 PG4 A 1 302 302 PG4 PG4 . G 3 PGE A 1 303 303 PGE PGE . H 4 FAD A 1 304 2 FAD FAD . I 3 PGE B 1 301 301 PGE PGE . J 4 FAD B 1 302 1 FAD FAD . K 2 PG4 C 1 301 301 PG4 PG4 . L 4 FAD C 1 302 3 FAD FAD . M 3 PGE D 1 301 301 PGE PGE . N 5 PEG D 1 302 302 PEG PEG . O 3 PGE D 1 303 303 PGE PGE . P 5 PEG D 1 304 304 PEG PEG . Q 4 FAD D 1 305 4 FAD FAD . R 5 PEG D 1 306 5 PEG PEG . S 6 HOH A 1 401 61 HOH HOH . S 6 HOH A 2 402 6 HOH HOH . S 6 HOH A 3 403 72 HOH HOH . S 6 HOH A 4 404 53 HOH HOH . S 6 HOH A 5 405 42 HOH HOH . S 6 HOH A 6 406 37 HOH HOH . S 6 HOH A 7 407 62 HOH HOH . S 6 HOH A 8 408 39 HOH HOH . S 6 HOH A 9 409 24 HOH HOH . S 6 HOH A 10 410 49 HOH HOH . S 6 HOH A 11 411 64 HOH HOH . S 6 HOH A 12 412 16 HOH HOH . S 6 HOH A 13 413 97 HOH HOH . S 6 HOH A 14 414 40 HOH HOH . S 6 HOH A 15 415 9 HOH HOH . S 6 HOH A 16 416 94 HOH HOH . S 6 HOH A 17 417 55 HOH HOH . S 6 HOH A 18 418 29 HOH HOH . S 6 HOH A 19 419 12 HOH HOH . S 6 HOH A 20 420 66 HOH HOH . S 6 HOH A 21 421 80 HOH HOH . S 6 HOH A 22 422 1 HOH HOH . S 6 HOH A 23 423 85 HOH HOH . S 6 HOH A 24 424 73 HOH HOH . T 6 HOH B 1 401 21 HOH HOH . T 6 HOH B 2 402 56 HOH HOH . T 6 HOH B 3 403 84 HOH HOH . T 6 HOH B 4 404 19 HOH HOH . T 6 HOH B 5 405 15 HOH HOH . T 6 HOH B 6 406 46 HOH HOH . T 6 HOH B 7 407 81 HOH HOH . T 6 HOH B 8 408 59 HOH HOH . T 6 HOH B 9 409 95 HOH HOH . T 6 HOH B 10 410 50 HOH HOH . T 6 HOH B 11 411 23 HOH HOH . T 6 HOH B 12 412 96 HOH HOH . T 6 HOH B 13 413 71 HOH HOH . T 6 HOH B 14 414 43 HOH HOH . T 6 HOH B 15 415 93 HOH HOH . T 6 HOH B 16 416 4 HOH HOH . T 6 HOH B 17 417 101 HOH HOH . T 6 HOH B 18 418 44 HOH HOH . T 6 HOH B 19 419 67 HOH HOH . T 6 HOH B 20 420 98 HOH HOH . T 6 HOH B 21 421 7 HOH HOH . T 6 HOH B 22 422 51 HOH HOH . U 6 HOH C 1 401 10 HOH HOH . U 6 HOH C 2 402 54 HOH HOH . U 6 HOH C 3 403 31 HOH HOH . U 6 HOH C 4 404 30 HOH HOH . U 6 HOH C 5 405 45 HOH HOH . U 6 HOH C 6 406 88 HOH HOH . U 6 HOH C 7 407 77 HOH HOH . U 6 HOH C 8 408 20 HOH HOH . U 6 HOH C 9 409 86 HOH HOH . U 6 HOH C 10 410 34 HOH HOH . U 6 HOH C 11 411 17 HOH HOH . U 6 HOH C 12 412 65 HOH HOH . U 6 HOH C 13 413 57 HOH HOH . U 6 HOH C 14 414 48 HOH HOH . U 6 HOH C 15 415 41 HOH HOH . U 6 HOH C 16 416 8 HOH HOH . U 6 HOH C 17 417 69 HOH HOH . U 6 HOH C 18 418 32 HOH HOH . U 6 HOH C 19 419 99 HOH HOH . U 6 HOH C 20 420 91 HOH HOH . U 6 HOH C 21 421 28 HOH HOH . U 6 HOH C 22 422 14 HOH HOH . U 6 HOH C 23 423 92 HOH HOH . U 6 HOH C 24 424 90 HOH HOH . U 6 HOH C 25 425 100 HOH HOH . U 6 HOH C 26 426 33 HOH HOH . U 6 HOH C 27 427 3 HOH HOH . U 6 HOH C 28 428 87 HOH HOH . U 6 HOH C 29 429 79 HOH HOH . U 6 HOH C 30 430 82 HOH HOH . U 6 HOH C 31 431 83 HOH HOH . V 6 HOH D 1 401 35 HOH HOH . V 6 HOH D 2 402 38 HOH HOH . V 6 HOH D 3 403 11 HOH HOH . V 6 HOH D 4 404 25 HOH HOH . V 6 HOH D 5 405 47 HOH HOH . V 6 HOH D 6 406 68 HOH HOH . V 6 HOH D 7 407 89 HOH HOH . V 6 HOH D 8 408 58 HOH HOH . V 6 HOH D 9 409 5 HOH HOH . V 6 HOH D 10 410 36 HOH HOH . V 6 HOH D 11 411 75 HOH HOH . V 6 HOH D 12 412 63 HOH HOH . V 6 HOH D 13 413 26 HOH HOH . V 6 HOH D 14 414 2 HOH HOH . V 6 HOH D 15 415 70 HOH HOH . V 6 HOH D 16 416 52 HOH HOH . V 6 HOH D 17 417 18 HOH HOH . V 6 HOH D 18 418 60 HOH HOH . V 6 HOH D 19 419 74 HOH HOH . V 6 HOH D 20 420 27 HOH HOH . V 6 HOH D 21 421 13 HOH HOH . V 6 HOH D 22 422 76 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . Q 4 1.621 -10.774 -22.39 0.9 33.33 ? PA FAD 305 D 1 HETATM 2 O O1A FAD . . . Q 4 2.407 -11.513 -21.363 0.9 33.29 ? O1A FAD 305 D 1 HETATM 3 O O2A FAD . . . Q 4 2.219 -9.554 -23.012 0.9 32.11 ? O2A FAD 305 D 1 HETATM 4 O O5B FAD . . . Q 4 1.175 -11.787 -23.533 0.9 34.29 ? O5B FAD 305 D 1 HETATM 5 C C5B FAD . . . Q 4 0.472 -11.228 -24.67 0.9 34.63 ? C5B FAD 305 D 1 HETATM 6 C C4B FAD . . . Q 4 -0.132 -12.379 -25.421 0.9 34.47 ? C4B FAD 305 D 1 HETATM 7 O O4B FAD . . . Q 4 0.925 -13.283 -25.834 0.9 34.06 ? O4B FAD 305 D 1 HETATM 8 C C3B FAD . . . Q 4 -1.049 -13.249 -24.566 0.9 34.63 ? C3B FAD 305 D 1 HETATM 9 O O3B FAD . . . Q 4 -2.354 -12.696 -24.548 0.9 35.29 ? O3B FAD 305 D 1 HETATM 10 C C2B FAD . . . Q 4 -0.933 -14.613 -25.246 0.9 34.23 ? C2B FAD 305 D 1 HETATM 11 O O2B FAD . . . Q 4 -1.685 -14.626 -26.437 0.9 34.6 ? O2B FAD 305 D 1 HETATM 12 C C1B FAD . . . Q 4 0.548 -14.623 -25.605 0.9 33.32 ? C1B FAD 305 D 1 HETATM 13 N N9A FAD . . . Q 4 1.489 -15.212 -24.664 0.9 32.31 ? N9A FAD 305 D 1 HETATM 14 C C8A FAD . . . Q 4 2.678 -14.642 -24.268 0.9 31.92 ? C8A FAD 305 D 1 HETATM 15 N N7A FAD . . . Q 4 3.431 -15.473 -23.585 0.9 31.7 ? N7A FAD 305 D 1 HETATM 16 C C5A FAD . . . Q 4 2.731 -16.673 -23.596 0.9 31.35 ? C5A FAD 305 D 1 HETATM 17 C C6A FAD . . . Q 4 3.021 -17.949 -23.076 0.9 30.71 ? C6A FAD 305 D 1 HETATM 18 N N6A FAD . . . Q 4 4.132 -18.233 -22.404 0.9 30.81 ? N6A FAD 305 D 1 HETATM 19 N N1A FAD . . . Q 4 2.104 -18.926 -23.271 0.9 29.8 ? N1A FAD 305 D 1 HETATM 20 C C2A FAD . . . Q 4 1.021 -18.649 -24.005 0.9 29.69 ? C2A FAD 305 D 1 HETATM 21 N N3A FAD . . . Q 4 0.657 -17.501 -24.566 0.9 30.51 ? N3A FAD 305 D 1 HETATM 22 C C4A FAD . . . Q 4 1.555 -16.534 -24.302 0.9 31.55 ? C4A FAD 305 D 1 HETATM 23 N N1 FAD . . . Q 4 -1.72 -11.845 -12.616 0.9 41.46 ? N1 FAD 305 D 1 HETATM 24 C C2 FAD . . . Q 4 -1.464 -12.604 -11.54 0.9 41.86 ? C2 FAD 305 D 1 HETATM 25 O O2 FAD . . . Q 4 -0.461 -13.322 -11.512 0.9 41.2 ? O2 FAD 305 D 1 HETATM 26 N N3 FAD . . . Q 4 -2.266 -12.565 -10.422 0.9 42.44 ? N3 FAD 305 D 1 HETATM 27 C C4 FAD . . . Q 4 -3.408 -11.795 -10.372 0.9 42.42 ? C4 FAD 305 D 1 HETATM 28 O O4 FAD . . . Q 4 -4.14 -11.859 -9.393 0.9 42.98 ? O4 FAD 305 D 1 HETATM 29 C C4X FAD . . . Q 4 -3.725 -11.011 -11.51 0.9 41.67 ? C4X FAD 305 D 1 HETATM 30 N N5 FAD . . . Q 4 -4.82 -10.278 -11.512 0.9 41.5 ? N5 FAD 305 D 1 HETATM 31 C C5X FAD . . . Q 4 -5.073 -9.518 -12.63 0.9 40.74 ? C5X FAD 305 D 1 HETATM 32 C C6 FAD . . . Q 4 -6.191 -8.662 -12.634 0.9 40.62 ? C6 FAD 305 D 1 HETATM 33 C C7 FAD . . . Q 4 -6.507 -7.898 -13.734 0.9 40.29 ? C7 FAD 305 D 1 HETATM 34 C C7M FAD . . . Q 4 -7.775 -7.085 -13.751 0.9 39.99 ? C7M FAD 305 D 1 HETATM 35 C C8 FAD . . . Q 4 -5.666 -7.938 -14.874 0.9 40.47 ? C8 FAD 305 D 1 HETATM 36 C C8M FAD . . . Q 4 -5.971 -7.104 -16.091 0.9 40.38 ? C8M FAD 305 D 1 HETATM 37 C C9 FAD . . . Q 4 -4.523 -8.701 -14.849 0.9 40.33 ? C9 FAD 305 D 1 HETATM 38 C C9A FAD . . . Q 4 -4.207 -9.501 -13.741 0.9 40.32 ? C9A FAD 305 D 1 HETATM 39 N N10 FAD . . . Q 4 -3.077 -10.311 -13.706 0.9 40.2 ? N10 FAD 305 D 1 HETATM 40 C C10 FAD . . . Q 4 -2.803 -11.1 -12.612 0.9 41.15 ? C10 FAD 305 D 1 HETATM 41 C C1' FAD . . . Q 4 -2.098 -10.255 -14.801 0.9 38.9 ? C1' FAD 305 D 1 HETATM 42 C C2' FAD . . . Q 4 -2.443 -11.188 -15.951 0.9 37.42 ? C2' FAD 305 D 1 HETATM 43 O O2' FAD . . . Q 4 -2.544 -12.516 -15.45 0.9 37.02 ? O2' FAD 305 D 1 HETATM 44 C C3' FAD . . . Q 4 -1.378 -11.151 -17.052 0.9 36.76 ? C3' FAD 305 D 1 HETATM 45 O O3' FAD . . . Q 4 -0.171 -11.656 -16.509 0.9 37.37 ? O3' FAD 305 D 1 HETATM 46 C C4' FAD . . . Q 4 -1.086 -9.796 -17.706 0.9 35.89 ? C4' FAD 305 D 1 HETATM 47 O O4' FAD . . . Q 4 -2.328 -9.123 -17.942 0.9 35.73 ? O4' FAD 305 D 1 HETATM 48 C C5' FAD . . . Q 4 -0.368 -9.969 -19.02 0.9 35.25 ? C5' FAD 305 D 1 HETATM 49 O O5' FAD . . . Q 4 -1.398 -10.489 -19.906 0.9 34.33 ? O5' FAD 305 D 1 HETATM 50 P P FAD . . . Q 4 -1.003 -11.331 -21.192 0.9 33.41 ? P FAD 305 D 1 HETATM 51 O O1P FAD . . . Q 4 -0.467 -12.659 -20.798 0.9 33.71 ? O1P FAD 305 D 1 HETATM 52 O O2P FAD . . . Q 4 -2.19 -11.294 -22.098 0.9 33.77 ? O2P FAD 305 D 1 HETATM 53 O O3P FAD . . . Q 4 0.188 -10.426 -21.77 0.9 33.42 ? O3P FAD 305 D 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 53 #