data_8RFN
#
_model_server_result.job_id            dJRxOEl-IraDW4VmfP0cmg 
_model_server_result.datetime_utc      '2025-07-03 02:59:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8rfn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":301}' 
#
_entry.id    8RFN 
#
_exptl.entry_id    8RFN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8RFN 
_cell.length_a            62 
_cell.length_b            108 
_cell.length_c            200 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8RFN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 H N N 
? 2 I N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 116 n n 
PA O2A FAD sing 117 n n 
PA O5B FAD sing 118 n n 
PA O3P FAD sing 119 n n 
O2A HOA2 FAD sing 120 n n 
O5B C5B FAD sing 121 n n 
C5B C4B FAD sing 122 n n 
C5B H51A FAD sing 123 n n 
C5B H52A FAD sing 124 n n 
C4B O4B FAD sing 125 n n 
C4B C3B FAD sing 126 n n 
C4B H4B FAD sing 127 n n 
O4B C1B FAD sing 128 n n 
C3B O3B FAD sing 129 n n 
C3B C2B FAD sing 130 n n 
C3B H3B FAD sing 131 n n 
O3B HO3A FAD sing 132 n n 
C2B O2B FAD sing 133 n n 
C2B C1B FAD sing 134 n n 
C2B H2B FAD sing 135 n n 
O2B HO2A FAD sing 136 n n 
C1B N9A FAD sing 137 n n 
C1B H1B FAD sing 138 n n 
N9A C8A FAD sing 139 n y 
N9A C4A FAD sing 140 n y 
C8A N7A FAD doub 141 n y 
C8A H8A FAD sing 142 n n 
N7A C5A FAD sing 143 n y 
C5A C6A FAD sing 144 n y 
C5A C4A FAD doub 145 n y 
C6A N6A FAD sing 146 n n 
C6A N1A FAD doub 147 n y 
N6A H61A FAD sing 148 n n 
N6A H62A FAD sing 149 n n 
N1A C2A FAD sing 150 n y 
C2A N3A FAD doub 151 n y 
C2A H2A FAD sing 152 n n 
N3A C4A FAD sing 153 n y 
N1 C2 FAD sing 154 n n 
N1 C10 FAD doub 155 n n 
C2 O2 FAD doub 156 n n 
C2 N3 FAD sing 157 n n 
N3 C4 FAD sing 158 n n 
N3 HN3 FAD sing 159 n n 
C4 O4 FAD doub 160 n n 
C4 C4X FAD sing 161 n n 
C4X N5 FAD doub 162 n n 
C4X C10 FAD sing 163 n n 
N5 C5X FAD sing 164 n n 
C5X C6 FAD doub 165 n y 
C5X C9A FAD sing 166 n y 
C6 C7 FAD sing 167 n y 
C6 H6 FAD sing 168 n n 
C7 C7M FAD sing 169 n n 
C7 C8 FAD doub 170 n y 
C7M HM71 FAD sing 171 n n 
C7M HM72 FAD sing 172 n n 
C7M HM73 FAD sing 173 n n 
C8 C8M FAD sing 174 n n 
C8 C9 FAD sing 175 n y 
C8M HM81 FAD sing 176 n n 
C8M HM82 FAD sing 177 n n 
C8M HM83 FAD sing 178 n n 
C9 C9A FAD doub 179 n y 
C9 H9 FAD sing 180 n n 
C9A N10 FAD sing 181 n n 
N10 C10 FAD sing 182 n n 
N10 C1' FAD sing 183 n n 
C1' C2' FAD sing 184 n n 
C1' "H1'1" FAD sing 185 n n 
C1' "H1'2" FAD sing 186 n n 
C2' O2' FAD sing 187 n n 
C2' C3' FAD sing 188 n n 
C2' H2' FAD sing 189 n n 
O2' HO2' FAD sing 190 n n 
C3' O3' FAD sing 191 n n 
C3' C4' FAD sing 192 n n 
C3' H3' FAD sing 193 n n 
O3' HO3' FAD sing 194 n n 
C4' O4' FAD sing 195 n n 
C4' C5' FAD sing 196 n n 
C4' H4' FAD sing 197 n n 
O4' HO4' FAD sing 198 n n 
C5' O5' FAD sing 199 n n 
C5' "H5'1" FAD sing 200 n n 
C5' "H5'2" FAD sing 201 n n 
O5' P FAD sing 202 n n 
P O1P FAD doub 203 n n 
P O2P FAD sing 204 n n 
P O3P FAD sing 205 n n 
O2P HOP2 FAD sing 206 n n 
#
_atom_sites.entry_id                     8RFN 
_atom_sites.fract_transf_matrix[1][1]    0.016129 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009259 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD A 1 301 1274 FAD FAD . 
F 2 FAD B 1 301 1274 FAD FAD . 
G 3 EPE B 1 302 1 EPE EPE . 
H 2 FAD C 1 301 1274 FAD FAD . 
I 2 FAD D 1 301 1274 FAD FAD . 
J 4 HOH A 1 401 7 HOH HOH . 
J 4 HOH A 2 402 18 HOH HOH . 
J 4 HOH A 3 403 11 HOH HOH . 
J 4 HOH A 4 404 28 HOH HOH . 
J 4 HOH A 5 405 49 HOH HOH . 
J 4 HOH A 6 406 33 HOH HOH . 
J 4 HOH A 7 407 27 HOH HOH . 
J 4 HOH A 8 408 30 HOH HOH . 
J 4 HOH A 9 409 51 HOH HOH . 
J 4 HOH A 10 410 32 HOH HOH . 
J 4 HOH A 11 411 34 HOH HOH . 
J 4 HOH A 12 412 31 HOH HOH . 
J 4 HOH A 13 413 62 HOH HOH . 
J 4 HOH A 14 414 35 HOH HOH . 
K 4 HOH B 1 401 13 HOH HOH . 
K 4 HOH B 2 402 10 HOH HOH . 
K 4 HOH B 3 403 26 HOH HOH . 
K 4 HOH B 4 404 6 HOH HOH . 
K 4 HOH B 5 405 40 HOH HOH . 
K 4 HOH B 6 406 21 HOH HOH . 
K 4 HOH B 7 407 76 HOH HOH . 
K 4 HOH B 8 408 52 HOH HOH . 
K 4 HOH B 9 409 29 HOH HOH . 
K 4 HOH B 10 410 48 HOH HOH . 
K 4 HOH B 11 411 14 HOH HOH . 
K 4 HOH B 12 412 22 HOH HOH . 
K 4 HOH B 13 413 68 HOH HOH . 
K 4 HOH B 14 414 46 HOH HOH . 
K 4 HOH B 15 415 44 HOH HOH . 
K 4 HOH B 16 416 39 HOH HOH . 
K 4 HOH B 17 417 45 HOH HOH . 
K 4 HOH B 18 418 50 HOH HOH . 
K 4 HOH B 19 419 42 HOH HOH . 
K 4 HOH B 20 420 43 HOH HOH . 
K 4 HOH B 21 421 60 HOH HOH . 
K 4 HOH B 22 422 41 HOH HOH . 
K 4 HOH B 23 423 47 HOH HOH . 
K 4 HOH B 24 424 53 HOH HOH . 
K 4 HOH B 25 425 59 HOH HOH . 
K 4 HOH B 26 426 37 HOH HOH . 
K 4 HOH B 27 427 38 HOH HOH . 
K 4 HOH B 28 428 61 HOH HOH . 
K 4 HOH B 29 429 36 HOH HOH . 
K 4 HOH B 30 430 57 HOH HOH . 
L 4 HOH C 1 401 17 HOH HOH . 
L 4 HOH C 2 402 63 HOH HOH . 
L 4 HOH C 3 403 73 HOH HOH . 
L 4 HOH C 4 404 19 HOH HOH . 
L 4 HOH C 5 405 1 HOH HOH . 
L 4 HOH C 6 406 12 HOH HOH . 
L 4 HOH C 7 407 3 HOH HOH . 
L 4 HOH C 8 408 2 HOH HOH . 
L 4 HOH C 9 409 20 HOH HOH . 
L 4 HOH C 10 410 5 HOH HOH . 
L 4 HOH C 11 411 24 HOH HOH . 
L 4 HOH C 12 412 54 HOH HOH . 
L 4 HOH C 13 413 8 HOH HOH . 
L 4 HOH C 14 414 67 HOH HOH . 
L 4 HOH C 15 415 55 HOH HOH . 
L 4 HOH C 16 416 65 HOH HOH . 
L 4 HOH C 17 417 66 HOH HOH . 
L 4 HOH C 18 418 56 HOH HOH . 
L 4 HOH C 19 419 64 HOH HOH . 
M 4 HOH D 1 401 4 HOH HOH . 
M 4 HOH D 2 402 25 HOH HOH . 
M 4 HOH D 3 403 74 HOH HOH . 
M 4 HOH D 4 404 16 HOH HOH . 
M 4 HOH D 5 405 23 HOH HOH . 
M 4 HOH D 6 406 75 HOH HOH . 
M 4 HOH D 7 407 9 HOH HOH . 
M 4 HOH D 8 408 71 HOH HOH . 
M 4 HOH D 9 409 70 HOH HOH . 
M 4 HOH D 10 410 58 HOH HOH . 
M 4 HOH D 11 411 72 HOH HOH . 
M 4 HOH D 12 412 69 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . H 2 27.907 14.7 -40.749 1 65.84 ? PA FAD 301 C 1 
HETATM 2 O O1A FAD . . . H 2 26.7 15.348 -40.174 1 61.27 ? O1A FAD 301 C 1 
HETATM 3 O O2A FAD . . . H 2 29.202 15.414 -40.605 1 57.31 ? O2A FAD 301 C 1 
HETATM 4 O O5B FAD . . . H 2 27.608 14.196 -42.243 1 59.41 ? O5B FAD 301 C 1 
HETATM 5 C C5B FAD . . . H 2 28.63 13.416 -42.986 1 66.29 ? C5B FAD 301 C 1 
HETATM 6 C C4B FAD . . . H 2 28.679 13.822 -44.455 1 69.55 ? C4B FAD 301 C 1 
HETATM 7 O O4B FAD . . . H 2 27.63 13.195 -45.248 1 68.69 ? O4B FAD 301 C 1 
HETATM 8 C C3B FAD . . . H 2 28.523 15.325 -44.738 1 66.16 ? C3B FAD 301 C 1 
HETATM 9 O O3B FAD . . . H 2 29.397 15.709 -45.787 1 63.44 ? O3B FAD 301 C 1 
HETATM 10 C C2B FAD . . . H 2 27.048 15.437 -45.147 1 64.5 ? C2B FAD 301 C 1 
HETATM 11 O O2B FAD . . . H 2 26.735 16.662 -45.777 1 60.2 ? O2B FAD 301 C 1 
HETATM 12 C C1B FAD . . . H 2 26.926 14.179 -46.014 1 61.2 ? C1B FAD 301 C 1 
HETATM 13 N N9A FAD . . . H 2 25.55 13.744 -46.314 1 56.53 ? N9A FAD 301 C 1 
HETATM 14 C C8A FAD . . . H 2 24.424 14.105 -45.61 1 57.54 ? C8A FAD 301 C 1 
HETATM 15 N N7A FAD . . . H 2 23.305 13.613 -46.086 1 57.84 ? N7A FAD 301 C 1 
HETATM 16 C C5A FAD . . . H 2 23.709 12.897 -47.208 1 64.74 ? C5A FAD 301 C 1 
HETATM 17 C C6A FAD . . . H 2 22.985 12.144 -48.162 1 60.96 ? C6A FAD 301 C 1 
HETATM 18 N N6A FAD . . . H 2 21.664 12.007 -48.133 1 61.49 ? N6A FAD 301 C 1 
HETATM 19 N N1A FAD . . . H 2 23.674 11.545 -49.165 1 55.09 ? N1A FAD 301 C 1 
HETATM 20 C C2A FAD . . . H 2 25 11.711 -49.191 1 59.33 ? C2A FAD 301 C 1 
HETATM 21 N N3A FAD . . . H 2 25.789 12.384 -48.35 1 61.88 ? N3A FAD 301 C 1 
HETATM 22 C C4A FAD . . . H 2 25.085 12.971 -47.361 1 62.49 ? C4A FAD 301 C 1 
HETATM 23 N N1 FAD . . . H 2 34.433 9.99 -33.148 1 63.39 ? N1 FAD 301 C 1 
HETATM 24 C C2 FAD . . . H 2 35.271 8.959 -32.826 1 55.3 ? C2 FAD 301 C 1 
HETATM 25 O O2 FAD . . . H 2 35.857 8.286 -33.683 1 48.4 ? O2 FAD 301 C 1 
HETATM 26 N N3 FAD . . . H 2 35.437 8.636 -31.486 1 55.01 ? N3 FAD 301 C 1 
HETATM 27 C C4 FAD . . . H 2 34.894 9.302 -30.417 1 53.51 ? C4 FAD 301 C 1 
HETATM 28 O O4 FAD . . . H 2 35.096 8.934 -29.285 1 58.44 ? O4 FAD 301 C 1 
HETATM 29 C C4X FAD . . . H 2 34.051 10.366 -30.759 1 59.16 ? C4X FAD 301 C 1 
HETATM 30 N N5 FAD . . . H 2 33.501 11.046 -29.781 1 56.49 ? N5 FAD 301 C 1 
HETATM 31 C C5X FAD . . . H 2 32.67 12.087 -30.103 1 57.09 ? C5X FAD 301 C 1 
HETATM 32 C C6 FAD . . . H 2 32.061 12.812 -29.059 1 56.13 ? C6 FAD 301 C 1 
HETATM 33 C C7 FAD . . . H 2 31.193 13.851 -29.313 1 60.82 ? C7 FAD 301 C 1 
HETATM 34 C C7M FAD . . . H 2 30.565 14.59 -28.156 1 62.81 ? C7M FAD 301 C 1 
HETATM 35 C C8 FAD . . . H 2 30.901 14.203 -30.67 1 58.93 ? C8 FAD 301 C 1 
HETATM 36 C C8M FAD . . . H 2 29.963 15.33 -31.012 1 54.54 ? C8M FAD 301 C 1 
HETATM 37 C C9 FAD . . . H 2 31.503 13.502 -31.692 1 60.6 ? C9 FAD 301 C 1 
HETATM 38 C C9A FAD . . . H 2 32.385 12.437 -31.439 1 59.2 ? C9A FAD 301 C 1 
HETATM 39 N N10 FAD . . . H 2 33.009 11.712 -32.454 1 59.97 ? N10 FAD 301 C 1 
HETATM 40 C C10 FAD . . . H 2 33.861 10.655 -32.159 1 63.21 ? C10 FAD 301 C 1 
HETATM 41 C C1' FAD . . . H 2 32.72 12 -33.869 1 62.37 ? C1' FAD 301 C 1 
HETATM 42 C C2' FAD . . . H 2 31.386 11.395 -34.325 1 64.1 ? C2' FAD 301 C 1 
HETATM 43 O O2' FAD . . . H 2 31.314 9.96 -34.391 1 61.18 ? O2' FAD 301 C 1 
HETATM 44 C C3' FAD . . . H 2 31.099 11.922 -35.733 1 66.46 ? C3' FAD 301 C 1 
HETATM 45 O O3' FAD . . . H 2 31.062 13.35 -35.713 1 63.49 ? O3' FAD 301 C 1 
HETATM 46 C C4' FAD . . . H 2 29.825 11.376 -36.376 1 59.62 ? C4' FAD 301 C 1 
HETATM 47 O O4' FAD . . . H 2 29.924 9.975 -36.636 1 50.81 ? O4' FAD 301 C 1 
HETATM 48 C C5' FAD . . . H 2 29.556 12.085 -37.683 1 59.48 ? C5' FAD 301 C 1 
HETATM 49 O O5' FAD . . . H 2 28.322 11.601 -38.216 1 63.14 ? O5' FAD 301 C 1 
HETATM 50 P P FAD . . . H 2 27.244 12.636 -38.731 1 62.16 ? P FAD 301 C 1 
HETATM 51 O O1P FAD . . . H 2 26.027 11.857 -39.068 1 60.91 ? O1P FAD 301 C 1 
HETATM 52 O O2P FAD . . . H 2 27.144 13.67 -37.681 1 58.67 ? O2P FAD 301 C 1 
HETATM 53 O O3P FAD . . . H 2 27.988 13.278 -40.009 1 72.6 ? O3P FAD 301 C 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           350 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           53 
#