data_8RFN # _model_server_result.job_id y7UWaDDGExLhM9PZ6gfYBA _model_server_result.datetime_utc '2024-10-19 14:24:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8rfn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":302}' # _entry.id 8RFN # _exptl.entry_id 8RFN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8RFN _cell.length_a 62 _cell.length_b 108 _cell.length_c 200 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RFN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 8RFN _atom_sites.fract_transf_matrix[1][1] 0.016129 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009259 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 301 1274 FAD FAD . F 2 FAD B 1 301 1274 FAD FAD . G 3 EPE B 1 302 1 EPE EPE . H 2 FAD C 1 301 1274 FAD FAD . I 2 FAD D 1 301 1274 FAD FAD . J 4 HOH A 1 401 7 HOH HOH . J 4 HOH A 2 402 18 HOH HOH . J 4 HOH A 3 403 11 HOH HOH . J 4 HOH A 4 404 28 HOH HOH . J 4 HOH A 5 405 49 HOH HOH . J 4 HOH A 6 406 33 HOH HOH . J 4 HOH A 7 407 27 HOH HOH . J 4 HOH A 8 408 30 HOH HOH . J 4 HOH A 9 409 51 HOH HOH . J 4 HOH A 10 410 32 HOH HOH . J 4 HOH A 11 411 34 HOH HOH . J 4 HOH A 12 412 31 HOH HOH . J 4 HOH A 13 413 62 HOH HOH . J 4 HOH A 14 414 35 HOH HOH . K 4 HOH B 1 401 13 HOH HOH . K 4 HOH B 2 402 10 HOH HOH . K 4 HOH B 3 403 26 HOH HOH . K 4 HOH B 4 404 6 HOH HOH . K 4 HOH B 5 405 40 HOH HOH . K 4 HOH B 6 406 21 HOH HOH . K 4 HOH B 7 407 76 HOH HOH . K 4 HOH B 8 408 52 HOH HOH . K 4 HOH B 9 409 29 HOH HOH . K 4 HOH B 10 410 48 HOH HOH . K 4 HOH B 11 411 14 HOH HOH . K 4 HOH B 12 412 22 HOH HOH . K 4 HOH B 13 413 68 HOH HOH . K 4 HOH B 14 414 46 HOH HOH . K 4 HOH B 15 415 44 HOH HOH . K 4 HOH B 16 416 39 HOH HOH . K 4 HOH B 17 417 45 HOH HOH . K 4 HOH B 18 418 50 HOH HOH . K 4 HOH B 19 419 42 HOH HOH . K 4 HOH B 20 420 43 HOH HOH . K 4 HOH B 21 421 60 HOH HOH . K 4 HOH B 22 422 41 HOH HOH . K 4 HOH B 23 423 47 HOH HOH . K 4 HOH B 24 424 53 HOH HOH . K 4 HOH B 25 425 59 HOH HOH . K 4 HOH B 26 426 37 HOH HOH . K 4 HOH B 27 427 38 HOH HOH . K 4 HOH B 28 428 61 HOH HOH . K 4 HOH B 29 429 36 HOH HOH . K 4 HOH B 30 430 57 HOH HOH . L 4 HOH C 1 401 17 HOH HOH . L 4 HOH C 2 402 63 HOH HOH . L 4 HOH C 3 403 73 HOH HOH . L 4 HOH C 4 404 19 HOH HOH . L 4 HOH C 5 405 1 HOH HOH . L 4 HOH C 6 406 12 HOH HOH . L 4 HOH C 7 407 3 HOH HOH . L 4 HOH C 8 408 2 HOH HOH . L 4 HOH C 9 409 20 HOH HOH . L 4 HOH C 10 410 5 HOH HOH . L 4 HOH C 11 411 24 HOH HOH . L 4 HOH C 12 412 54 HOH HOH . L 4 HOH C 13 413 8 HOH HOH . L 4 HOH C 14 414 67 HOH HOH . L 4 HOH C 15 415 55 HOH HOH . L 4 HOH C 16 416 65 HOH HOH . L 4 HOH C 17 417 66 HOH HOH . L 4 HOH C 18 418 56 HOH HOH . L 4 HOH C 19 419 64 HOH HOH . M 4 HOH D 1 401 4 HOH HOH . M 4 HOH D 2 402 25 HOH HOH . M 4 HOH D 3 403 74 HOH HOH . M 4 HOH D 4 404 16 HOH HOH . M 4 HOH D 5 405 23 HOH HOH . M 4 HOH D 6 406 75 HOH HOH . M 4 HOH D 7 407 9 HOH HOH . M 4 HOH D 8 408 71 HOH HOH . M 4 HOH D 9 409 70 HOH HOH . M 4 HOH D 10 410 58 HOH HOH . M 4 HOH D 11 411 72 HOH HOH . M 4 HOH D 12 412 69 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . G 3 36.417 -65.486 -22.381 1 166.65 ? N1 EPE 302 B 1 HETATM 2 C C2 EPE . . . G 3 35.69 -66.775 -22.337 1 150.6 ? C2 EPE 302 B 1 HETATM 3 C C3 EPE . . . G 3 34.385 -66.731 -23.105 1 144.37 ? C3 EPE 302 B 1 HETATM 4 N N4 EPE . . . G 3 33.529 -65.638 -22.606 1 154.21 ? N4 EPE 302 B 1 HETATM 5 C C5 EPE . . . G 3 34.243 -64.377 -22.846 1 153.85 ? C5 EPE 302 B 1 HETATM 6 C C6 EPE . . . G 3 35.521 -64.354 -22.039 1 161.48 ? C6 EPE 302 B 1 HETATM 7 C C7 EPE . . . G 3 32.152 -65.648 -23.13 1 135.37 ? C7 EPE 302 B 1 HETATM 8 C C8 EPE . . . G 3 31.072 -65.894 -22.082 1 118.45 ? C8 EPE 302 B 1 HETATM 9 O O8 EPE . . . G 3 30.67 -64.704 -21.432 1 106.34 ? O8 EPE 302 B 1 HETATM 10 C C9 EPE . . . G 3 37.644 -65.502 -21.531 1 154.32 ? C9 EPE 302 B 1 HETATM 11 C C10 EPE . . . G 3 38.753 -64.607 -22.065 1 156.92 ? C10 EPE 302 B 1 HETATM 12 S S EPE . . . G 3 38.64 -64.437 -23.827 1 169.53 ? S EPE 302 B 1 HETATM 13 O O1S EPE . . . G 3 39.905 -63.933 -24.274 1 149.43 ? O1S EPE 302 B 1 HETATM 14 O O2S EPE . . . G 3 38.421 -65.894 -24.304 1 152.88 ? O2S EPE 302 B 1 HETATM 15 O O3S EPE . . . G 3 37.479 -63.644 -24.11 1 176.43 ? O3S EPE 302 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 15 #