data_8RFT # _model_server_result.job_id c5hE0tQrjcEXgusL19D5fQ _model_server_result.datetime_utc '2025-07-08 03:03:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8rft # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":405}' # _entry.id 8RFT # _exptl.entry_id 8RFT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8RFT _cell.length_a 104.5 _cell.length_b 104.5 _cell.length_c 64.66 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RFT _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -y,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -52.25 90.499655 0 3 'crystal symmetry operation' 3_455 -x+y-1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -104.5 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N ? 5 H N N ? 5 I N N ? 5 J N N ? 5 K N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 1 _pdbx_entity_branch_link.entity_branch_list_num_2 2 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 FRU _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B GLC 1 C 1 GLC A 574 SUC 2 n B FRU 2 C 2 FRU A 574 SUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C1 GLC . C GLC 1 1_555 B O2 FRU . C FRU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? metalc ? metalc1 A ND1 HIS 89 A HIS 89 1_555 C CU CU . A CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc2 A NE2 HIS 94 A HIS 94 1_555 D CU CU . A CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc3 A NE2 HIS 129 A HIS 129 1_555 D CU CU . A CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc4 A SG CYS 130 A CYS 130 1_555 C CU CU . A CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc5 A ND1 HIS 140 A HIS 140 1_555 C CU CU . A CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc6 A SD MET 145 A MET 145 1_555 C CU CU . A CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc7 A NE2 HIS 301 A HIS 301 1_555 D CU CU . A CU 402 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc8 D CU CU . A CU 402 1_555 L O HOH . A HOH 673 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.892 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 340 n n S O2 SO4 doub 341 n n S O3 SO4 sing 342 n n S O4 SO4 sing 343 n n # _atom_sites.entry_id 8RFT _atom_sites.fract_transf_matrix[1][1] 0.009569 _atom_sites.fract_transf_matrix[1][2] 0.005525 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01105 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015466 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CU A 1 401 474 CU CU . D 3 CU A 1 402 475 CU CU . E 4 NO2 A 1 403 576 NO2 NO2 . F 5 SO4 A 1 404 1 SO4 SO4 . G 5 SO4 A 1 405 2 SO4 SO4 . H 5 SO4 A 1 406 3 SO4 SO4 . I 5 SO4 A 1 407 4 SO4 SO4 . J 5 SO4 A 1 408 5 SO4 SO4 . K 5 SO4 A 1 409 6 SO4 SO4 . L 6 HOH A 1 501 334 HOH HOH . L 6 HOH A 2 502 94 HOH HOH . L 6 HOH A 3 503 494 HOH HOH . L 6 HOH A 4 504 95 HOH HOH . L 6 HOH A 5 505 32 HOH HOH . L 6 HOH A 6 506 115 HOH HOH . L 6 HOH A 7 507 107 HOH HOH . L 6 HOH A 8 508 201 HOH HOH . L 6 HOH A 9 509 378 HOH HOH . L 6 HOH A 10 510 150 HOH HOH . L 6 HOH A 11 511 35 HOH HOH . L 6 HOH A 12 512 169 HOH HOH . L 6 HOH A 13 513 77 HOH HOH . L 6 HOH A 14 514 141 HOH HOH . L 6 HOH A 15 515 391 HOH HOH . L 6 HOH A 16 516 121 HOH HOH . L 6 HOH A 17 517 58 HOH HOH . L 6 HOH A 18 518 139 HOH HOH . L 6 HOH A 19 519 130 HOH HOH . L 6 HOH A 20 520 493 HOH HOH . L 6 HOH A 21 521 47 HOH HOH . L 6 HOH A 22 522 12 HOH HOH . L 6 HOH A 23 523 126 HOH HOH . L 6 HOH A 24 524 339 HOH HOH . L 6 HOH A 25 525 143 HOH HOH . L 6 HOH A 26 526 147 HOH HOH . L 6 HOH A 27 527 106 HOH HOH . L 6 HOH A 28 528 49 HOH HOH . L 6 HOH A 29 529 125 HOH HOH . L 6 HOH A 30 530 69 HOH HOH . L 6 HOH A 31 531 61 HOH HOH . L 6 HOH A 32 532 112 HOH HOH . L 6 HOH A 33 533 33 HOH HOH . L 6 HOH A 34 534 29 HOH HOH . L 6 HOH A 35 535 124 HOH HOH . L 6 HOH A 36 536 50 HOH HOH . L 6 HOH A 37 537 163 HOH HOH . L 6 HOH A 38 538 18 HOH HOH . L 6 HOH A 39 539 164 HOH HOH . L 6 HOH A 40 540 45 HOH HOH . L 6 HOH A 41 541 57 HOH HOH . L 6 HOH A 42 542 129 HOH HOH . L 6 HOH A 43 543 128 HOH HOH . L 6 HOH A 44 544 74 HOH HOH . L 6 HOH A 45 545 120 HOH HOH . L 6 HOH A 46 546 55 HOH HOH . L 6 HOH A 47 547 171 HOH HOH . L 6 HOH A 48 548 182 HOH HOH . L 6 HOH A 49 549 102 HOH HOH . L 6 HOH A 50 550 108 HOH HOH . L 6 HOH A 51 551 329 HOH HOH . L 6 HOH A 52 552 154 HOH HOH . L 6 HOH A 53 553 22 HOH HOH . L 6 HOH A 54 554 333 HOH HOH . L 6 HOH A 55 555 5 HOH HOH . L 6 HOH A 56 556 70 HOH HOH . L 6 HOH A 57 557 59 HOH HOH . L 6 HOH A 58 558 232 HOH HOH . L 6 HOH A 59 559 159 HOH HOH . L 6 HOH A 60 560 229 HOH HOH . L 6 HOH A 61 561 19 HOH HOH . L 6 HOH A 62 562 28 HOH HOH . L 6 HOH A 63 563 110 HOH HOH . L 6 HOH A 64 564 513 HOH HOH . L 6 HOH A 65 565 114 HOH HOH . L 6 HOH A 66 566 20 HOH HOH . L 6 HOH A 67 567 305 HOH HOH . L 6 HOH A 68 568 167 HOH HOH . L 6 HOH A 69 569 11 HOH HOH . L 6 HOH A 70 570 10 HOH HOH . L 6 HOH A 71 571 98 HOH HOH . L 6 HOH A 72 572 392 HOH HOH . L 6 HOH A 73 573 1 HOH HOH . L 6 HOH A 74 574 76 HOH HOH . L 6 HOH A 75 575 34 HOH HOH . L 6 HOH A 76 576 116 HOH HOH . L 6 HOH A 77 577 153 HOH HOH . L 6 HOH A 78 578 9 HOH HOH . L 6 HOH A 79 579 161 HOH HOH . L 6 HOH A 80 580 71 HOH HOH . L 6 HOH A 81 581 87 HOH HOH . L 6 HOH A 82 582 123 HOH HOH . L 6 HOH A 83 583 137 HOH HOH . L 6 HOH A 84 584 37 HOH HOH . L 6 HOH A 85 585 13 HOH HOH . L 6 HOH A 86 586 233 HOH HOH . L 6 HOH A 87 587 38 HOH HOH . L 6 HOH A 88 588 75 HOH HOH . L 6 HOH A 89 589 46 HOH HOH . L 6 HOH A 90 590 79 HOH HOH . L 6 HOH A 91 591 101 HOH HOH . L 6 HOH A 92 592 497 HOH HOH . L 6 HOH A 93 593 56 HOH HOH . L 6 HOH A 94 594 63 HOH HOH . L 6 HOH A 95 595 179 HOH HOH . L 6 HOH A 96 596 97 HOH HOH . L 6 HOH A 97 597 17 HOH HOH . L 6 HOH A 98 598 103 HOH HOH . L 6 HOH A 99 599 43 HOH HOH . L 6 HOH A 100 600 202 HOH HOH . L 6 HOH A 101 601 48 HOH HOH . L 6 HOH A 102 602 30 HOH HOH . L 6 HOH A 103 603 204 HOH HOH . L 6 HOH A 104 604 15 HOH HOH . L 6 HOH A 105 605 93 HOH HOH . L 6 HOH A 106 606 44 HOH HOH . L 6 HOH A 107 607 78 HOH HOH . L 6 HOH A 108 608 25 HOH HOH . L 6 HOH A 109 609 104 HOH HOH . L 6 HOH A 110 610 16 HOH HOH . L 6 HOH A 111 611 293 HOH HOH . L 6 HOH A 112 612 438 HOH HOH . L 6 HOH A 113 613 289 HOH HOH . L 6 HOH A 114 614 8 HOH HOH . L 6 HOH A 115 615 187 HOH HOH . L 6 HOH A 116 616 36 HOH HOH . L 6 HOH A 117 617 4 HOH HOH . L 6 HOH A 118 618 210 HOH HOH . L 6 HOH A 119 619 85 HOH HOH . L 6 HOH A 120 620 90 HOH HOH . L 6 HOH A 121 621 89 HOH HOH . L 6 HOH A 122 622 7 HOH HOH . L 6 HOH A 123 623 223 HOH HOH . L 6 HOH A 124 624 42 HOH HOH . L 6 HOH A 125 625 14 HOH HOH . L 6 HOH A 126 626 152 HOH HOH . L 6 HOH A 127 627 173 HOH HOH . L 6 HOH A 128 628 402 HOH HOH . L 6 HOH A 129 629 162 HOH HOH . L 6 HOH A 130 630 6 HOH HOH . L 6 HOH A 131 631 24 HOH HOH . L 6 HOH A 132 632 148 HOH HOH . L 6 HOH A 133 633 27 HOH HOH . L 6 HOH A 134 634 197 HOH HOH . L 6 HOH A 135 635 96 HOH HOH . L 6 HOH A 136 636 40 HOH HOH . L 6 HOH A 137 637 2 HOH HOH . L 6 HOH A 138 638 21 HOH HOH . L 6 HOH A 139 639 31 HOH HOH . L 6 HOH A 140 640 122 HOH HOH . L 6 HOH A 141 641 111 HOH HOH . L 6 HOH A 142 642 3 HOH HOH . L 6 HOH A 143 643 53 HOH HOH . L 6 HOH A 144 644 26 HOH HOH . L 6 HOH A 145 645 80 HOH HOH . L 6 HOH A 146 646 91 HOH HOH . L 6 HOH A 147 647 41 HOH HOH . L 6 HOH A 148 648 172 HOH HOH . L 6 HOH A 149 649 60 HOH HOH . L 6 HOH A 150 650 51 HOH HOH . L 6 HOH A 151 651 64 HOH HOH . L 6 HOH A 152 652 177 HOH HOH . L 6 HOH A 153 653 500 HOH HOH . L 6 HOH A 154 654 376 HOH HOH . L 6 HOH A 155 655 133 HOH HOH . L 6 HOH A 156 656 525 HOH HOH . L 6 HOH A 157 657 23 HOH HOH . L 6 HOH A 158 658 343 HOH HOH . L 6 HOH A 159 659 132 HOH HOH . L 6 HOH A 160 660 193 HOH HOH . L 6 HOH A 161 661 576 HOH HOH . L 6 HOH A 162 662 325 HOH HOH . L 6 HOH A 163 663 88 HOH HOH . L 6 HOH A 164 664 149 HOH HOH . L 6 HOH A 165 665 54 HOH HOH . L 6 HOH A 166 666 68 HOH HOH . L 6 HOH A 167 667 119 HOH HOH . L 6 HOH A 168 668 502 HOH HOH . L 6 HOH A 169 669 203 HOH HOH . L 6 HOH A 170 670 230 HOH HOH . L 6 HOH A 171 671 457 HOH HOH . L 6 HOH A 172 672 170 HOH HOH . L 6 HOH A 173 673 569 HOH HOH . L 6 HOH A 174 674 99 HOH HOH . L 6 HOH A 175 675 118 HOH HOH . L 6 HOH A 176 676 499 HOH HOH . L 6 HOH A 177 677 113 HOH HOH . L 6 HOH A 178 678 165 HOH HOH . L 6 HOH A 179 679 348 HOH HOH . L 6 HOH A 180 680 67 HOH HOH . L 6 HOH A 181 681 81 HOH HOH . L 6 HOH A 182 682 175 HOH HOH . L 6 HOH A 183 683 266 HOH HOH . L 6 HOH A 184 684 365 HOH HOH . L 6 HOH A 185 685 277 HOH HOH . L 6 HOH A 186 686 127 HOH HOH . L 6 HOH A 187 687 575 HOH HOH . L 6 HOH A 188 688 135 HOH HOH . L 6 HOH A 189 689 86 HOH HOH . L 6 HOH A 190 690 134 HOH HOH . L 6 HOH A 191 691 157 HOH HOH . L 6 HOH A 192 692 269 HOH HOH . L 6 HOH A 193 693 370 HOH HOH . L 6 HOH A 194 694 196 HOH HOH . L 6 HOH A 195 695 105 HOH HOH . L 6 HOH A 196 696 436 HOH HOH . L 6 HOH A 197 697 156 HOH HOH . L 6 HOH A 198 698 404 HOH HOH . L 6 HOH A 199 699 345 HOH HOH . L 6 HOH A 200 700 199 HOH HOH . L 6 HOH A 201 701 279 HOH HOH . L 6 HOH A 202 702 226 HOH HOH . L 6 HOH A 203 703 195 HOH HOH . L 6 HOH A 204 704 217 HOH HOH . L 6 HOH A 205 705 138 HOH HOH . L 6 HOH A 206 706 326 HOH HOH . L 6 HOH A 207 707 285 HOH HOH . L 6 HOH A 208 708 288 HOH HOH . L 6 HOH A 209 709 92 HOH HOH . L 6 HOH A 210 710 83 HOH HOH . L 6 HOH A 211 711 428 HOH HOH . L 6 HOH A 212 712 144 HOH HOH . L 6 HOH A 213 713 270 HOH HOH . L 6 HOH A 214 714 282 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . G 5 -81.358 47.203 -0.571 0.75 50.24 ? S SO4 405 A 1 HETATM 2 O O1 SO4 . . . G 5 -80.954 45.846 -0.709 0.75 51.45 ? O1 SO4 405 A 1 HETATM 3 O O2 SO4 . . . G 5 -81.626 47.734 -1.876 0.75 56.47 ? O2 SO4 405 A 1 HETATM 4 O O3 SO4 . . . G 5 -80.329 47.96 0.073 0.75 57.29 ? O3 SO4 405 A 1 HETATM 5 O O4 SO4 . . . G 5 -82.543 47.279 0.23 0.75 59.57 ? O4 SO4 405 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #