data_8RHL # _model_server_result.job_id M2hXeAQf60IsewhbSRDEnw _model_server_result.datetime_utc '2024-10-11 00:32:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8rhl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"QA","auth_seq_id":301}' # _entry.id 8RHL # _exptl.entry_id 8RHL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 16 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.09 _cell.angle_gamma 90 _cell.entry_id 8RHL _cell.length_a 135.21 _cell.length_b 303.14 _cell.length_c 143.23 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RHL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 32-meric _pdbx_struct_assembly.oligomeric_count 32 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 16 GA N N ? 16 IA N N ? 16 KA N N ? 16 LA N N ? 16 NA N N ? 16 OA N N ? 16 PA N N ? 16 QA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 H N THR 1 H THR 1 1_555 CA C24 6VO 5 e 6VO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.46 ? covale ? covale2 H OG1 THR 1 H THR 1 1_555 CA C 6VO 5 e 6VO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.418 ? covale ? covale3 K N THR 1 K THR 1 1_555 DA C24 6VO 5 f 6VO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? covale ? covale4 K OG1 THR 1 K THR 1 1_555 DA C 6VO 5 f 6VO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.389 ? covale ? covale5 V N THR 1 V THR 1 1_555 EA C24 6VO 5 g 6VO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.464 ? covale ? covale6 V OG1 THR 1 V THR 1 1_555 EA C 6VO 5 g 6VO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.402 ? covale ? covale7 Y N THR 1 Y THR 1 1_555 FA C24 6VO 5 h 6VO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale8 Y OG1 THR 1 Y THR 1 1_555 FA C 6VO 5 h 6VO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.413 ? covale ? covale9 CA C ACE 1 e ACE 1 1_555 CA N PPN 2 e PPN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale10 CA C PPN 2 e PPN 2 1_555 CA N LEU 3 e LEU 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? covale ? covale11 CA CE1 PPN 2 e PPN 2 1_555 CA OH TYR 4 e TYR 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale12 CA C TYR 4 e TYR 4 1_555 CA N 6VO 5 e 6VO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale13 DA C ACE 1 f ACE 1 1_555 DA N PPN 2 f PPN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.308 ? covale ? covale14 DA C PPN 2 f PPN 2 1_555 DA N LEU 3 f LEU 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.377 ? covale ? covale15 DA CE1 PPN 2 f PPN 2 1_555 DA OH TYR 4 f TYR 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale16 DA C TYR 4 f TYR 4 1_555 DA N 6VO 5 f 6VO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale17 EA C ACE 1 g ACE 1 1_555 EA N PPN 2 g PPN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale18 EA C PPN 2 g PPN 2 1_555 EA N LEU 3 g LEU 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? covale ? covale19 EA CE1 PPN 2 g PPN 2 1_555 EA OH TYR 4 g TYR 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale20 EA C TYR 4 g TYR 4 1_555 EA N 6VO 5 g 6VO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale21 FA C ACE 1 h ACE 1 1_555 FA N PPN 2 h PPN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.311 ? covale ? covale22 FA C PPN 2 h PPN 2 1_555 FA N LEU 3 h LEU 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.387 ? covale ? covale23 FA CE1 PPN 2 h PPN 2 1_555 FA OH TYR 4 h TYR 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale24 FA C TYR 4 h TYR 4 1_555 FA N 6VO 5 h 6VO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? metalc ? metalc1 G OG1 THR 17 G THR 8 1_555 GA MG MG . G MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.678 ? metalc ? metalc2 G O ARG 131 G ARG 122 1_555 GA MG MG . G MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.913 ? metalc ? metalc3 G O ALA 132 G ALA 123 1_555 GA MG MG . G MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.939 ? metalc ? metalc4 G O MET 134 G MET 125 1_555 GA MG MG . G MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc5 I O ALA 175 I ALA 174 1_555 IA MG MG . I MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.843 ? metalc ? metalc6 I O ASP 178 I ASP 177 1_555 IA MG MG . I MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc7 I O SER 181 I SER 180 1_555 IA MG MG . I MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.907 ? metalc ? metalc8 I O ASP 205 I ASP 204 1_555 PA MG MG . Y MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc9 K O ALA 165 K ALA 165 1_555 KA MG MG . K MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.765 ? metalc ? metalc10 K O ASP 168 K ASP 168 1_555 KA MG MG . K MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc11 KA MG MG . K MG 302 1_555 W O ASP 205 W ASP 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc12 L OXT ASP 222 L ASP 222 1_555 NA MG MG . V MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc13 N O ILE 163 N ILE 163 1_555 LA MG MG . N MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.707 ? metalc ? metalc14 N O SER 169 N SER 169 1_555 LA MG MG . N MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc15 V O ILE 163 V ILE 163 1_555 NA MG MG . V MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.646 ? metalc ? metalc16 V O ASP 166 V ASP 166 1_555 NA MG MG . V MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc17 Y O ALA 165 Y ALA 165 1_555 PA MG MG . Y MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc18 Y O ASP 168 Y ASP 168 1_555 PA MG MG . Y MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc19 Y O SER 171 Y SER 171 1_555 PA MG MG . Y MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.872 ? metalc ? metalc20 Z O THR 192 Z THR 192 1_555 QA MG MG . Z MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.655 ? metalc ? metalc21 Z O HIS 195 Z HIS 195 1_555 QA MG MG . Z MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.966 ? metalc ? metalc22 Z O VAL 198 Z VAL 198 1_555 QA MG MG . Z MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8RHL _atom_sites.fract_transf_matrix[1][1] 0.007396 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003153 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003299 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00759 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code GA 16 MG G 1 301 6 MG MG . HA 17 CL G 1 302 10 CL CL . IA 16 MG I 1 301 7 MG MG . JA 18 MES K 1 301 1 MES MES . KA 16 MG K 1 302 9 MG MG . LA 16 MG N 1 201 5 MG MG . MA 17 CL U 1 301 11 CL CL . NA 16 MG V 1 301 2 MG MG . OA 16 MG X 1 201 8 MG MG . PA 16 MG Y 1 301 4 MG MG . QA 16 MG Z 1 301 3 MG MG . RA 19 HOH A 1 301 42 HOH HOH . SA 19 HOH B 1 301 59 HOH HOH . SA 19 HOH B 2 302 13 HOH HOH . TA 19 HOH C 1 301 36 HOH HOH . TA 19 HOH C 2 302 34 HOH HOH . UA 19 HOH D 1 301 37 HOH HOH . VA 19 HOH F 1 301 48 HOH HOH . WA 19 HOH G 1 401 63 HOH HOH . XA 19 HOH H 1 301 47 HOH HOH . YA 19 HOH J 1 201 55 HOH HOH . YA 19 HOH J 2 202 56 HOH HOH . YA 19 HOH J 3 203 3 HOH HOH . YA 19 HOH J 4 204 4 HOH HOH . YA 19 HOH J 5 205 9 HOH HOH . ZA 19 HOH K 1 401 39 HOH HOH . ZA 19 HOH K 2 402 25 HOH HOH . AB 19 HOH L 1 301 22 HOH HOH . AB 19 HOH L 2 302 28 HOH HOH . AB 19 HOH L 3 303 46 HOH HOH . BB 19 HOH M 1 301 41 HOH HOH . BB 19 HOH M 2 302 1 HOH HOH . BB 19 HOH M 3 303 49 HOH HOH . BB 19 HOH M 4 304 33 HOH HOH . BB 19 HOH M 5 305 52 HOH HOH . BB 19 HOH M 6 306 6 HOH HOH . BB 19 HOH M 7 307 21 HOH HOH . BB 19 HOH M 8 308 19 HOH HOH . BB 19 HOH M 9 309 67 HOH HOH . CB 19 HOH N 1 301 14 HOH HOH . CB 19 HOH N 2 302 31 HOH HOH . CB 19 HOH N 3 303 24 HOH HOH . CB 19 HOH N 4 304 17 HOH HOH . CB 19 HOH N 5 305 54 HOH HOH . CB 19 HOH N 6 306 65 HOH HOH . DB 19 HOH O 1 301 44 HOH HOH . EB 19 HOH P 1 301 53 HOH HOH . EB 19 HOH P 2 302 51 HOH HOH . FB 19 HOH Q 1 301 23 HOH HOH . FB 19 HOH Q 2 302 20 HOH HOH . FB 19 HOH Q 3 303 40 HOH HOH . FB 19 HOH Q 4 304 50 HOH HOH . FB 19 HOH Q 5 305 62 HOH HOH . GB 19 HOH R 1 301 60 HOH HOH . HB 19 HOH S 1 301 10 HOH HOH . HB 19 HOH S 2 302 58 HOH HOH . IB 19 HOH U 1 401 5 HOH HOH . IB 19 HOH U 2 402 30 HOH HOH . JB 19 HOH V 1 401 45 HOH HOH . JB 19 HOH V 2 402 69 HOH HOH . KB 19 HOH W 1 301 38 HOH HOH . KB 19 HOH W 2 302 32 HOH HOH . LB 19 HOH X 1 301 18 HOH HOH . LB 19 HOH X 2 302 7 HOH HOH . LB 19 HOH X 3 303 26 HOH HOH . LB 19 HOH X 4 304 43 HOH HOH . LB 19 HOH X 5 305 66 HOH HOH . MB 19 HOH Z 1 401 61 HOH HOH . NB 19 HOH a 1 301 29 HOH HOH . NB 19 HOH a 2 302 8 HOH HOH . NB 19 HOH a 3 303 15 HOH HOH . NB 19 HOH a 4 304 64 HOH HOH . NB 19 HOH a 5 305 57 HOH HOH . OB 19 HOH b 1 201 16 HOH HOH . OB 19 HOH b 2 202 11 HOH HOH . PB 19 HOH e 1 101 2 HOH HOH . QB 19 HOH f 1 101 35 HOH HOH . RB 19 HOH g 1 101 27 HOH HOH . SB 19 HOH h 1 101 12 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id QA _atom_site.label_entity_id 16 _atom_site.Cartn_x 72.705 _atom_site.Cartn_y -148.19 _atom_site.Cartn_z 37.623 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 98.07 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 301 _atom_site.auth_asym_id Z _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 64 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #