data_8RHT # _model_server_result.job_id 7RQBQdLLtxR5azRCdNdDOw _model_server_result.datetime_utc '2024-11-21 12:37:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8rht # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 8RHT # _exptl.entry_id 8RHT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 243.308 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4,4,7,8-tetramethyl-10~{H}-[1,3,5]triazino[1,2-a]benzimidazol-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8RHT _cell.length_a 41.92 _cell.length_b 60.928 _cell.length_c 68.882 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RHT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H17 N5' _chem_comp.formula_weight 243.308 _chem_comp.id A1H0S _chem_comp.mon_nstd_flag . _chem_comp.name 4,4,7,8-tetramethyl-10~{H}-[1,3,5]triazino[1,2-a]benzimidazol-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Mecillinam, bound form' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAR CAB A1H0S sing 1 n n CAB CAA A1H0S doub 2 n y CAB CAC A1H0S sing 3 n y CAA CAE A1H0S sing 4 n y CAO CAC A1H0S sing 5 n n CAC CAP A1H0S doub 6 n y CAE NAH A1H0S sing 7 n n CAE CAD A1H0S doub 8 n y NAH CAG A1H0S sing 9 n n CAP CAD A1H0S sing 10 n y CAD NAF A1H0S sing 11 n n CAG NAF A1H0S sing 12 n n CAG NAI A1H0S doub 13 n n NAF CAL A1H0S sing 14 n n NAI CAJ A1H0S sing 15 n n CAM CAL A1H0S sing 16 n n CAL NAQ A1H0S sing 17 n n CAL CAN A1H0S sing 18 n n CAJ NAQ A1H0S doub 19 n n CAJ NAK A1H0S sing 20 n n CAO H2 A1H0S sing 21 n n CAO H3 A1H0S sing 22 n n CAO H4 A1H0S sing 23 n n CAP H5 A1H0S sing 24 n n CAM H6 A1H0S sing 25 n n CAM H7 A1H0S sing 26 n n CAM H8 A1H0S sing 27 n n CAN H9 A1H0S sing 28 n n CAN H10 A1H0S sing 29 n n CAN H11 A1H0S sing 30 n n NAK H13 A1H0S sing 31 n n NAK H14 A1H0S sing 32 n n NAH H15 A1H0S sing 33 n n CAA H16 A1H0S sing 34 n n CAR H17 A1H0S sing 35 n n CAR H18 A1H0S sing 36 n n CAR H19 A1H0S sing 37 n n # _atom_sites.entry_id 8RHT _atom_sites.fract_transf_matrix[1][1] 0.023855 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016413 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014518 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDP A 1 301 250 NDP NDP . C 3 A1H0S A 1 302 251 A1H0S DH4 . D 4 HOH A 1 401 2 HOH HOH . D 4 HOH A 2 402 30 HOH HOH . D 4 HOH A 3 403 27 HOH HOH . D 4 HOH A 4 404 34 HOH HOH . D 4 HOH A 5 405 35 HOH HOH . D 4 HOH A 6 406 12 HOH HOH . D 4 HOH A 7 407 17 HOH HOH . D 4 HOH A 8 408 14 HOH HOH . D 4 HOH A 9 409 15 HOH HOH . D 4 HOH A 10 410 11 HOH HOH . D 4 HOH A 11 411 26 HOH HOH . D 4 HOH A 12 412 24 HOH HOH . D 4 HOH A 13 413 29 HOH HOH . D 4 HOH A 14 414 33 HOH HOH . D 4 HOH A 15 415 19 HOH HOH . D 4 HOH A 16 416 32 HOH HOH . D 4 HOH A 17 417 36 HOH HOH . D 4 HOH A 18 418 28 HOH HOH . D 4 HOH A 19 419 25 HOH HOH . D 4 HOH A 20 420 9 HOH HOH . D 4 HOH A 21 421 13 HOH HOH . D 4 HOH A 22 422 22 HOH HOH . D 4 HOH A 23 423 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAC A1H0S . . . C 3 3.753 -11.15 -6.867 1 91.9 ? CAC A1H0S 302 A 1 HETATM 2 C CAE A1H0S . . . C 3 5.796 -9.388 -7.428 1 88.26 ? CAE A1H0S 302 A 1 HETATM 3 C CAG A1H0S . . . C 3 5.795 -7.232 -7.484 1 83.78 ? CAG A1H0S 302 A 1 HETATM 4 C CAJ A1H0S . . . C 3 5.193 -4.919 -7.263 1 83.6 ? CAJ A1H0S 302 A 1 HETATM 5 C CAO A1H0S . . . C 3 2.664 -11.968 -6.527 1 85.44 ? CAO A1H0S 302 A 1 HETATM 6 C CAP A1H0S . . . C 3 3.634 -9.791 -6.621 1 99.26 ? CAP A1H0S 302 A 1 HETATM 7 C CAD A1H0S . . . C 3 4.629 -8.936 -6.94 1 94.4 ? CAD A1H0S 302 A 1 HETATM 8 N NAF A1H0S . . . C 3 4.734 -7.62 -6.749 1 86.3 ? NAF A1H0S 302 A 1 HETATM 9 C CAL A1H0S . . . C 3 3.592 -6.741 -6.349 1 83.83 ? CAL A1H0S 302 A 1 HETATM 10 C CAM A1H0S . . . C 3 2.307 -7.031 -7.109 1 83.28 ? CAM A1H0S 302 A 1 HETATM 11 C CAN A1H0S . . . C 3 3.26 -6.948 -4.851 1 85.75 ? CAN A1H0S 302 A 1 HETATM 12 N NAQ A1H0S . . . C 3 3.991 -5.32 -6.609 1 86.1 ? NAQ A1H0S 302 A 1 HETATM 13 N NAK A1H0S . . . C 3 5.489 -3.63 -7.482 1 79.52 ? NAK A1H0S 302 A 1 HETATM 14 N NAI A1H0S . . . C 3 6.102 -5.886 -7.665 1 82.2 ? NAI A1H0S 302 A 1 HETATM 15 N NAH A1H0S . . . C 3 6.547 -8.323 -7.672 1 83.55 ? NAH A1H0S 302 A 1 HETATM 16 C CAA A1H0S . . . C 3 5.971 -10.671 -7.729 1 87.14 ? CAA A1H0S 302 A 1 HETATM 17 C CAB A1H0S . . . C 3 4.967 -11.59 -7.435 1 89.53 ? CAB A1H0S 302 A 1 HETATM 18 C CAR A1H0S . . . C 3 5.236 -12.911 -7.734 1 93.85 ? CAR A1H0S 302 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #