data_8RIW # _model_server_result.job_id FJoOFD8Mjt2iN5KLGY8PLw _model_server_result.datetime_utc '2025-01-10 08:29:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8riw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":501}' # _entry.id 8RIW # _exptl.entry_id 8RIW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8RIW _cell.length_a 104.687 _cell.length_b 156.104 _cell.length_c 182.528 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RIW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 L N N ? 9 W N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.046 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.109 ? metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc8 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc10 H MG MG . A MG 502 1_555 BA O HOH . A HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? metalc ? metalc11 H MG MG . A MG 502 1_555 BA O HOH . A HOH 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? metalc ? metalc12 H MG MG . A MG 502 1_555 BA O HOH . A HOH 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc13 H MG MG . A MG 502 1_555 BA O HOH . A HOH 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc14 B OE1 GLN 11 B GLN 11 1_555 M MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc15 B OE1 GLU 111 B GLU 113 1_555 N CA CA . B CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? metalc ? metalc16 L O1A GDP . B GDP 501 1_555 M MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc17 M MG MG . B MG 502 1_555 CA O HOH . B HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? metalc ? metalc18 M MG MG . B MG 502 1_555 CA O HOH . B HOH 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc19 M MG MG . B MG 502 1_555 CA O HOH . B HOH 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? metalc ? metalc20 M MG MG . B MG 502 1_555 CA O HOH . B HOH 633 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.88 ? metalc ? metalc21 N CA CA . B CA 503 1_555 CA O HOH . B HOH 621 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc22 C OD1 ASP 39 C ASP 39 1_555 U CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc23 C OD2 ASP 39 C ASP 39 1_555 U CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? metalc ? metalc24 C O THR 41 C THR 41 1_555 U CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? metalc ? metalc25 C OG1 THR 41 C THR 41 1_555 U CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc26 C O GLY 44 C GLY 44 1_555 U CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc27 C OE1 GLU 55 C GLU 55 1_555 U CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? metalc ? metalc28 C OE2 GLU 55 C GLU 55 1_555 U CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc29 S O1G GTP . C GTP 501 1_555 T MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc30 S O1B GTP . C GTP 501 1_555 T MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc31 T MG MG . C MG 502 1_555 DA O HOH . C HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc32 T MG MG . C MG 502 1_555 DA O HOH . C HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc33 T MG MG . C MG 502 1_555 DA O HOH . C HOH 629 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc34 T MG MG . C MG 502 1_555 DA O HOH . C HOH 633 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc35 D OE1 GLN 11 D GLN 11 1_555 X MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc36 W O1A GDP . D GDP 501 1_555 X MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.752 ? metalc ? metalc37 X MG MG . D MG 502 1_555 EA O HOH . D HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc38 X MG MG . D MG 502 1_555 EA O HOH . D HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.772 ? metalc ? metalc39 X MG MG . D MG 502 1_555 EA O HOH . D HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc40 Z O2G ACP . F ACP 401 1_555 AA MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc41 Z O2B ACP . F ACP 401 1_555 AA MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 181 n n PB O2B GDP sing 182 n n PB O3B GDP sing 183 n n PB O3A GDP sing 184 n n O2B HOB2 GDP sing 185 n n O3B HOB3 GDP sing 186 n n O3A PA GDP sing 187 n n PA O1A GDP doub 188 n n PA O2A GDP sing 189 n n PA O5' GDP sing 190 n n O2A HOA2 GDP sing 191 n n O5' C5' GDP sing 192 n n C5' C4' GDP sing 193 n n C5' H5' GDP sing 194 n n C5' "H5''" GDP sing 195 n n C4' O4' GDP sing 196 n n C4' C3' GDP sing 197 n n C4' H4' GDP sing 198 n n O4' C1' GDP sing 199 n n C3' O3' GDP sing 200 n n C3' C2' GDP sing 201 n n C3' H3' GDP sing 202 n n O3' HO3' GDP sing 203 n n C2' O2' GDP sing 204 n n C2' C1' GDP sing 205 n n C2' H2' GDP sing 206 n n O2' HO2' GDP sing 207 n n C1' N9 GDP sing 208 n n C1' H1' GDP sing 209 n n N9 C8 GDP sing 210 n y N9 C4 GDP sing 211 n y C8 N7 GDP doub 212 n y C8 H8 GDP sing 213 n n N7 C5 GDP sing 214 n y C5 C6 GDP sing 215 n n C5 C4 GDP doub 216 n y C6 O6 GDP doub 217 n n C6 N1 GDP sing 218 n n N1 C2 GDP sing 219 n n N1 HN1 GDP sing 220 n n C2 N2 GDP sing 221 n n C2 N3 GDP doub 222 n n N2 HN21 GDP sing 223 n n N2 HN22 GDP sing 224 n n N3 C4 GDP sing 225 n n # _atom_sites.entry_id 8RIW _atom_sites.fract_transf_matrix[1][1] 0.009552 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006406 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005479 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 CA A 1 503 503 CA CA . J 7 CA A 1 504 504 CA CA . K 8 IMD A 1 505 505 IMD IMD . L 9 GDP B 1 501 501 GDP GDP . M 6 MG B 1 502 502 MG MG . N 7 CA B 1 503 503 CA CA . O 10 MES B 1 504 504 MES MES . P 11 A1H00 B 1 505 505 A1H00 LIG . Q 8 IMD B 1 506 506 IMD IMD . R 8 IMD B 1 507 507 IMD IMD . S 5 GTP C 1 501 501 GTP GTP . T 6 MG C 1 502 502 MG MG . U 7 CA C 1 503 503 CA CA . V 12 GOL C 1 504 504 GOL GOL . W 9 GDP D 1 501 501 GDP GDP . X 6 MG D 1 502 502 MG MG . Y 11 A1H00 D 1 503 503 A1H00 LIG . Z 13 ACP F 1 401 401 ACP ACP . AA 6 MG F 1 402 402 MG MG . BA 14 HOH A 1 601 22 HOH HOH . BA 14 HOH A 2 602 27 HOH HOH . BA 14 HOH A 3 603 136 HOH HOH . BA 14 HOH A 4 604 55 HOH HOH . BA 14 HOH A 5 605 19 HOH HOH . BA 14 HOH A 6 606 20 HOH HOH . BA 14 HOH A 7 607 28 HOH HOH . BA 14 HOH A 8 608 31 HOH HOH . BA 14 HOH A 9 609 33 HOH HOH . BA 14 HOH A 10 610 167 HOH HOH . BA 14 HOH A 11 611 166 HOH HOH . BA 14 HOH A 12 612 96 HOH HOH . BA 14 HOH A 13 613 154 HOH HOH . BA 14 HOH A 14 614 23 HOH HOH . BA 14 HOH A 15 615 53 HOH HOH . BA 14 HOH A 16 616 76 HOH HOH . BA 14 HOH A 17 617 179 HOH HOH . CA 14 HOH B 1 601 110 HOH HOH . CA 14 HOH B 2 602 174 HOH HOH . CA 14 HOH B 3 603 163 HOH HOH . CA 14 HOH B 4 604 62 HOH HOH . CA 14 HOH B 5 605 17 HOH HOH . CA 14 HOH B 6 606 126 HOH HOH . CA 14 HOH B 7 607 182 HOH HOH . CA 14 HOH B 8 608 81 HOH HOH . CA 14 HOH B 9 609 8 HOH HOH . CA 14 HOH B 10 610 113 HOH HOH . CA 14 HOH B 11 611 94 HOH HOH . CA 14 HOH B 12 612 84 HOH HOH . CA 14 HOH B 13 613 26 HOH HOH . CA 14 HOH B 14 614 119 HOH HOH . CA 14 HOH B 15 615 196 HOH HOH . CA 14 HOH B 16 616 93 HOH HOH . CA 14 HOH B 17 617 153 HOH HOH . CA 14 HOH B 18 618 48 HOH HOH . CA 14 HOH B 19 619 66 HOH HOH . CA 14 HOH B 20 620 89 HOH HOH . CA 14 HOH B 21 621 77 HOH HOH . CA 14 HOH B 22 622 175 HOH HOH . CA 14 HOH B 23 623 92 HOH HOH . CA 14 HOH B 24 624 16 HOH HOH . CA 14 HOH B 25 625 189 HOH HOH . CA 14 HOH B 26 626 184 HOH HOH . CA 14 HOH B 27 627 195 HOH HOH . CA 14 HOH B 28 628 132 HOH HOH . CA 14 HOH B 29 629 43 HOH HOH . CA 14 HOH B 30 630 64 HOH HOH . CA 14 HOH B 31 631 75 HOH HOH . CA 14 HOH B 32 632 103 HOH HOH . CA 14 HOH B 33 633 173 HOH HOH . CA 14 HOH B 34 634 186 HOH HOH . CA 14 HOH B 35 635 185 HOH HOH . CA 14 HOH B 36 636 130 HOH HOH . CA 14 HOH B 37 637 191 HOH HOH . CA 14 HOH B 38 638 183 HOH HOH . DA 14 HOH C 1 601 158 HOH HOH . DA 14 HOH C 2 602 5 HOH HOH . DA 14 HOH C 3 603 108 HOH HOH . DA 14 HOH C 4 604 37 HOH HOH . DA 14 HOH C 5 605 13 HOH HOH . DA 14 HOH C 6 606 91 HOH HOH . DA 14 HOH C 7 607 21 HOH HOH . DA 14 HOH C 8 608 7 HOH HOH . DA 14 HOH C 9 609 9 HOH HOH . DA 14 HOH C 10 610 123 HOH HOH . DA 14 HOH C 11 611 41 HOH HOH . DA 14 HOH C 12 612 12 HOH HOH . DA 14 HOH C 13 613 3 HOH HOH . DA 14 HOH C 14 614 47 HOH HOH . DA 14 HOH C 15 615 68 HOH HOH . DA 14 HOH C 16 616 59 HOH HOH . DA 14 HOH C 17 617 61 HOH HOH . DA 14 HOH C 18 618 193 HOH HOH . DA 14 HOH C 19 619 18 HOH HOH . DA 14 HOH C 20 620 141 HOH HOH . DA 14 HOH C 21 621 143 HOH HOH . DA 14 HOH C 22 622 6 HOH HOH . DA 14 HOH C 23 623 60 HOH HOH . DA 14 HOH C 24 624 45 HOH HOH . DA 14 HOH C 25 625 70 HOH HOH . DA 14 HOH C 26 626 38 HOH HOH . DA 14 HOH C 27 627 52 HOH HOH . DA 14 HOH C 28 628 44 HOH HOH . DA 14 HOH C 29 629 15 HOH HOH . DA 14 HOH C 30 630 29 HOH HOH . DA 14 HOH C 31 631 148 HOH HOH . DA 14 HOH C 32 632 54 HOH HOH . DA 14 HOH C 33 633 192 HOH HOH . DA 14 HOH C 34 634 105 HOH HOH . DA 14 HOH C 35 635 98 HOH HOH . DA 14 HOH C 36 636 30 HOH HOH . DA 14 HOH C 37 637 25 HOH HOH . DA 14 HOH C 38 638 50 HOH HOH . DA 14 HOH C 39 639 83 HOH HOH . DA 14 HOH C 40 640 57 HOH HOH . DA 14 HOH C 41 641 10 HOH HOH . DA 14 HOH C 42 642 124 HOH HOH . DA 14 HOH C 43 643 14 HOH HOH . DA 14 HOH C 44 644 111 HOH HOH . DA 14 HOH C 45 645 82 HOH HOH . DA 14 HOH C 46 646 117 HOH HOH . DA 14 HOH C 47 647 71 HOH HOH . DA 14 HOH C 48 648 56 HOH HOH . DA 14 HOH C 49 649 80 HOH HOH . DA 14 HOH C 50 650 115 HOH HOH . DA 14 HOH C 51 651 165 HOH HOH . DA 14 HOH C 52 652 69 HOH HOH . DA 14 HOH C 53 653 42 HOH HOH . DA 14 HOH C 54 654 67 HOH HOH . DA 14 HOH C 55 655 73 HOH HOH . DA 14 HOH C 56 656 102 HOH HOH . DA 14 HOH C 57 657 97 HOH HOH . DA 14 HOH C 58 658 133 HOH HOH . DA 14 HOH C 59 659 58 HOH HOH . DA 14 HOH C 60 660 87 HOH HOH . DA 14 HOH C 61 661 95 HOH HOH . DA 14 HOH C 62 662 106 HOH HOH . DA 14 HOH C 63 663 51 HOH HOH . DA 14 HOH C 64 664 49 HOH HOH . DA 14 HOH C 65 665 46 HOH HOH . DA 14 HOH C 66 666 139 HOH HOH . DA 14 HOH C 67 667 138 HOH HOH . DA 14 HOH C 68 668 35 HOH HOH . DA 14 HOH C 69 669 65 HOH HOH . DA 14 HOH C 70 670 24 HOH HOH . DA 14 HOH C 71 671 142 HOH HOH . DA 14 HOH C 72 672 145 HOH HOH . DA 14 HOH C 73 673 178 HOH HOH . DA 14 HOH C 74 674 172 HOH HOH . DA 14 HOH C 75 675 125 HOH HOH . DA 14 HOH C 76 676 149 HOH HOH . EA 14 HOH D 1 601 198 HOH HOH . EA 14 HOH D 2 602 40 HOH HOH . EA 14 HOH D 3 603 199 HOH HOH . EA 14 HOH D 4 604 118 HOH HOH . EA 14 HOH D 5 605 197 HOH HOH . FA 14 HOH E 1 201 116 HOH HOH . FA 14 HOH E 2 202 180 HOH HOH . FA 14 HOH E 3 203 160 HOH HOH . GA 14 HOH F 1 501 188 HOH HOH . GA 14 HOH F 2 502 187 HOH HOH . GA 14 HOH F 3 503 194 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . L 9 18.573 49.311 15.675 1 66.32 ? PB GDP 501 B 1 HETATM 2 O O1B GDP . . . L 9 17.89 50.254 14.715 1 61.05 ? O1B GDP 501 B 1 HETATM 3 O O2B GDP . . . L 9 19.335 50.092 16.719 1 64.71 ? O2B GDP 501 B 1 HETATM 4 O O3B GDP . . . L 9 19.546 48.438 14.921 1 68.43 ? O3B GDP 501 B 1 HETATM 5 O O3A GDP . . . L 9 17.517 48.356 16.423 1 64.88 ? O3A GDP 501 B 1 HETATM 6 P PA GDP . . . L 9 15.99 48.756 16.747 1 67.79 ? PA GDP 501 B 1 HETATM 7 O O1A GDP . . . L 9 15.059 48.496 15.585 1 67.85 ? O1A GDP 501 B 1 HETATM 8 O O2A GDP . . . L 9 15.894 50.192 17.2 1 60.16 ? O2A GDP 501 B 1 HETATM 9 O O5' GDP . . . L 9 15.706 47.755 17.973 1 45.87 ? O5' GDP 501 B 1 HETATM 10 C C5' GDP . . . L 9 14.567 46.905 18.022 1 63.94 ? C5' GDP 501 B 1 HETATM 11 C C4' GDP . . . L 9 14.082 46.878 19.463 1 69.68 ? C4' GDP 501 B 1 HETATM 12 O O4' GDP . . . L 9 13.715 48.212 19.798 1 54.49 ? O4' GDP 501 B 1 HETATM 13 C C3' GDP . . . L 9 12.84 46.026 19.623 1 77.61 ? C3' GDP 501 B 1 HETATM 14 O O3' GDP . . . L 9 12.851 45.424 20.921 1 65.77 ? O3' GDP 501 B 1 HETATM 15 C C2' GDP . . . L 9 11.69 47.002 19.529 1 56.23 ? C2' GDP 501 B 1 HETATM 16 O O2' GDP . . . L 9 10.645 46.61 20.42 1 76.8 ? O2' GDP 501 B 1 HETATM 17 C C1' GDP . . . L 9 12.301 48.322 19.964 1 70.08 ? C1' GDP 501 B 1 HETATM 18 N N9 GDP . . . L 9 11.824 49.473 19.158 1 65.67 ? N9 GDP 501 B 1 HETATM 19 C C8 GDP . . . L 9 12.084 49.707 17.861 1 61.56 ? C8 GDP 501 B 1 HETATM 20 N N7 GDP . . . L 9 11.505 50.866 17.452 1 69.21 ? N7 GDP 501 B 1 HETATM 21 C C5 GDP . . . L 9 10.868 51.397 18.513 1 71.16 ? C5 GDP 501 B 1 HETATM 22 C C6 GDP . . . L 9 10.059 52.607 18.788 1 64.38 ? C6 GDP 501 B 1 HETATM 23 O O6 GDP . . . L 9 9.824 53.442 17.89 1 70.57 ? O6 GDP 501 B 1 HETATM 24 N N1 GDP . . . L 9 9.585 52.779 20.028 1 64.26 ? N1 GDP 501 B 1 HETATM 25 C C2 GDP . . . L 9 9.818 51.896 21.017 1 65.19 ? C2 GDP 501 B 1 HETATM 26 N N2 GDP . . . L 9 9.304 52.136 22.246 1 55.19 ? N2 GDP 501 B 1 HETATM 27 N N3 GDP . . . L 9 10.549 50.769 20.837 1 65.83 ? N3 GDP 501 B 1 HETATM 28 C C4 GDP . . . L 9 11.087 50.475 19.633 1 67.21 ? C4 GDP 501 B 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 42 _model_server_stats.query_time_ms 227 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 28 #