data_8RJQ # _model_server_result.job_id mpwz6WUCEuFW1Ljt-pqg7A _model_server_result.datetime_utc '2025-06-24 05:53:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8rjq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":607}' # _entry.id 8RJQ # _exptl.entry_id 8RJQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 5 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8RJQ _cell.length_a 184.641 _cell.length_b 184.641 _cell.length_c 182.171 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RJQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,Q 1 1,2 B,J,K,L,M,N,O,P,R 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 12_554 x,x-y,-z-1/2 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 -91.0855 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 13 A CYS 13 1_555 C CBA EL5 . A EL5 601 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.958 ? covale ? covale2 A SG CYS 13 A CYS 13 1_555 C CBA EL5 . A EL5 601 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.93 ? covale ? covale3 A SG CYS 13 A CYS 13 1_555 C CBA EL5 . A EL5 601 1_555 ? ? ? ? C ? ? ? ? ? ? ? 1.866 ? covale ? covale4 B SG CYS 13 B CYS 13 1_555 J CBA EL5 . B EL5 601 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.801 ? covale ? covale5 B SG CYS 13 B CYS 13 1_555 J CBA EL5 . B EL5 601 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.816 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 332 n n C1 C2 PEG sing 333 n n C1 H11 PEG sing 334 n n C1 H12 PEG sing 335 n n O1 HO1 PEG sing 336 n n C2 O2 PEG sing 337 n n C2 H21 PEG sing 338 n n C2 H22 PEG sing 339 n n O2 C3 PEG sing 340 n n C3 C4 PEG sing 341 n n C3 H31 PEG sing 342 n n C3 H32 PEG sing 343 n n C4 O4 PEG sing 344 n n C4 H41 PEG sing 345 n n C4 H42 PEG sing 346 n n O4 HO4 PEG sing 347 n n # _atom_sites.entry_id 8RJQ _atom_sites.fract_transf_matrix[1][1] 0.005416 _atom_sites.fract_transf_matrix[1][2] 0.003127 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006254 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005489 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EL5 A 1 601 1 EL5 BLA . D 3 SO4 A 1 602 1 SO4 SO4 . E 3 SO4 A 1 603 2 SO4 SO4 . F 3 SO4 A 1 604 13 SO4 SO4 . G 4 GOL A 1 605 8 GOL GOL . H 4 GOL A 1 606 9 GOL GOL . I 5 PEG A 1 607 1 PEG PEG . J 2 EL5 B 1 601 2 EL5 BLA . K 3 SO4 B 1 602 6 SO4 SO4 . L 3 SO4 B 1 603 7 SO4 SO4 . M 3 SO4 B 1 604 10 SO4 SO4 . N 3 SO4 B 1 605 14 SO4 SO4 . O 4 GOL B 1 606 10 GOL GOL . P 5 PEG B 1 607 2 PEG PEG . Q 6 HOH A 1 701 144 HOH HOH . Q 6 HOH A 2 702 172 HOH HOH . Q 6 HOH A 3 703 95 HOH HOH . Q 6 HOH A 4 704 46 HOH HOH . Q 6 HOH A 5 705 6 HOH HOH . Q 6 HOH A 6 706 79 HOH HOH . Q 6 HOH A 7 707 152 HOH HOH . Q 6 HOH A 8 708 43 HOH HOH . Q 6 HOH A 9 709 1 HOH HOH . Q 6 HOH A 10 710 98 HOH HOH . Q 6 HOH A 11 711 53 HOH HOH . Q 6 HOH A 12 712 10 HOH HOH . Q 6 HOH A 13 713 8 HOH HOH . Q 6 HOH A 14 714 103 HOH HOH . Q 6 HOH A 15 715 16 HOH HOH . Q 6 HOH A 16 716 207 HOH HOH . Q 6 HOH A 17 717 200 HOH HOH . Q 6 HOH A 18 718 51 HOH HOH . Q 6 HOH A 19 719 5 HOH HOH . Q 6 HOH A 20 720 203 HOH HOH . Q 6 HOH A 21 721 188 HOH HOH . Q 6 HOH A 22 722 25 HOH HOH . Q 6 HOH A 23 723 19 HOH HOH . Q 6 HOH A 24 724 148 HOH HOH . Q 6 HOH A 25 725 214 HOH HOH . Q 6 HOH A 26 726 153 HOH HOH . Q 6 HOH A 27 727 205 HOH HOH . Q 6 HOH A 28 728 47 HOH HOH . Q 6 HOH A 29 729 50 HOH HOH . Q 6 HOH A 30 730 113 HOH HOH . Q 6 HOH A 31 731 106 HOH HOH . Q 6 HOH A 32 732 41 HOH HOH . Q 6 HOH A 33 733 174 HOH HOH . Q 6 HOH A 34 734 141 HOH HOH . Q 6 HOH A 35 735 91 HOH HOH . Q 6 HOH A 36 736 206 HOH HOH . Q 6 HOH A 37 737 9 HOH HOH . Q 6 HOH A 38 738 22 HOH HOH . Q 6 HOH A 39 739 29 HOH HOH . Q 6 HOH A 40 740 208 HOH HOH . Q 6 HOH A 41 741 111 HOH HOH . Q 6 HOH A 42 742 143 HOH HOH . Q 6 HOH A 43 743 179 HOH HOH . Q 6 HOH A 44 744 13 HOH HOH . Q 6 HOH A 45 745 185 HOH HOH . Q 6 HOH A 46 746 204 HOH HOH . Q 6 HOH A 47 747 140 HOH HOH . Q 6 HOH A 48 748 105 HOH HOH . Q 6 HOH A 49 749 147 HOH HOH . Q 6 HOH A 50 750 52 HOH HOH . Q 6 HOH A 51 751 175 HOH HOH . Q 6 HOH A 52 752 209 HOH HOH . Q 6 HOH A 53 753 48 HOH HOH . Q 6 HOH A 54 754 80 HOH HOH . Q 6 HOH A 55 755 35 HOH HOH . Q 6 HOH A 56 756 55 HOH HOH . Q 6 HOH A 57 757 54 HOH HOH . Q 6 HOH A 58 758 189 HOH HOH . R 6 HOH B 1 701 194 HOH HOH . R 6 HOH B 2 702 20 HOH HOH . R 6 HOH B 3 703 74 HOH HOH . R 6 HOH B 4 704 211 HOH HOH . R 6 HOH B 5 705 173 HOH HOH . R 6 HOH B 6 706 92 HOH HOH . R 6 HOH B 7 707 61 HOH HOH . R 6 HOH B 8 708 213 HOH HOH . R 6 HOH B 9 709 166 HOH HOH . R 6 HOH B 10 710 84 HOH HOH . R 6 HOH B 11 711 85 HOH HOH . R 6 HOH B 12 712 110 HOH HOH . R 6 HOH B 13 713 109 HOH HOH . R 6 HOH B 14 714 75 HOH HOH . R 6 HOH B 15 715 191 HOH HOH . R 6 HOH B 16 716 195 HOH HOH . R 6 HOH B 17 717 2 HOH HOH . R 6 HOH B 18 718 196 HOH HOH . R 6 HOH B 19 719 18 HOH HOH . R 6 HOH B 20 720 192 HOH HOH . R 6 HOH B 21 721 30 HOH HOH . R 6 HOH B 22 722 171 HOH HOH . R 6 HOH B 23 723 3 HOH HOH . R 6 HOH B 24 724 122 HOH HOH . R 6 HOH B 25 725 37 HOH HOH . R 6 HOH B 26 726 63 HOH HOH . R 6 HOH B 27 727 78 HOH HOH . R 6 HOH B 28 728 76 HOH HOH . R 6 HOH B 29 729 197 HOH HOH . R 6 HOH B 30 730 210 HOH HOH . R 6 HOH B 31 731 212 HOH HOH . R 6 HOH B 32 732 24 HOH HOH . R 6 HOH B 33 733 164 HOH HOH . R 6 HOH B 34 734 11 HOH HOH . R 6 HOH B 35 735 102 HOH HOH . R 6 HOH B 36 736 14 HOH HOH . R 6 HOH B 37 737 86 HOH HOH . R 6 HOH B 38 738 190 HOH HOH . R 6 HOH B 39 739 199 HOH HOH . R 6 HOH B 40 740 168 HOH HOH . R 6 HOH B 41 741 112 HOH HOH . R 6 HOH B 42 742 117 HOH HOH . R 6 HOH B 43 743 159 HOH HOH . R 6 HOH B 44 744 104 HOH HOH . R 6 HOH B 45 745 198 HOH HOH . R 6 HOH B 46 746 124 HOH HOH . R 6 HOH B 47 747 119 HOH HOH . R 6 HOH B 48 748 163 HOH HOH . R 6 HOH B 49 749 160 HOH HOH . R 6 HOH B 50 750 201 HOH HOH . R 6 HOH B 51 751 158 HOH HOH . R 6 HOH B 52 752 101 HOH HOH . R 6 HOH B 53 753 170 HOH HOH . R 6 HOH B 54 754 31 HOH HOH . R 6 HOH B 55 755 125 HOH HOH . R 6 HOH B 56 756 165 HOH HOH . R 6 HOH B 57 757 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . I 5 -13.83 25.909 24.382 1 110.16 ? C1 PEG 607 A 1 HETATM 2 O O1 PEG . . . I 5 -12.912 26.956 24.633 1 101.2 ? O1 PEG 607 A 1 HETATM 3 C C2 PEG . . . I 5 -14.139 25.754 22.923 1 114.46 ? C2 PEG 607 A 1 HETATM 4 O O2 PEG . . . I 5 -14.813 26.913 22.437 1 120.1 ? O2 PEG 607 A 1 HETATM 5 C C3 PEG . . . I 5 -16.225 26.897 22.639 1 118.56 ? C3 PEG 607 A 1 HETATM 6 C C4 PEG . . . I 5 -16.929 27.287 21.367 1 116.41 ? C4 PEG 607 A 1 HETATM 7 O O4 PEG . . . I 5 -17.407 28.621 21.383 1 114.3 ? O4 PEG 607 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #