data_8RJW # _model_server_result.job_id u3DyJa9ybJ0v-io3IUVqfQ _model_server_result.datetime_utc '2025-03-09 02:33:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8rjw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":501}' # _entry.id 8RJW # _exptl.entry_id 8RJW _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8RJW _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RJW _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details decameric _pdbx_struct_assembly.oligomeric_count 10 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 P O HOH . B HOH 502 1_555 K MG MG . C MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc2 P O HOH . B HOH 504 1_555 K MG MG . C MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.75 ? metalc ? metalc3 C OE2 GLU 140 C GLU 140 1_555 K MG MG . C MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc4 Q O HOH . C HOH 601 1_555 L MG MG . D MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.793 ? metalc ? metalc5 D O TYR 126 D TYR 126 1_555 M MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.978 ? metalc ? metalc6 D OD2 ASP 149 D ASP 149 1_555 M MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc7 L MG MG . D MG 501 1_555 V O HOH . J HOH 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.823 ? metalc ? metalc8 L MG MG . D MG 501 1_555 V O HOH . J HOH 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.988 ? metalc ? metalc9 M MG MG . D MG 502 1_555 E OE2 GLU 140 E GLU 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? metalc ? metalc10 M MG MG . D MG 502 1_555 S O HOH . E HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.901 ? metalc ? metalc11 S O HOH . E HOH 501 1_555 N MG MG . F MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.888 ? metalc ? metalc12 S O HOH . E HOH 504 1_555 N MG MG . F MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc13 F OE2 GLU 140 F GLU 140 1_555 N MG MG . F MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc14 N MG MG . F MG 501 1_555 T O HOH . F HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? metalc ? metalc15 N MG MG . F MG 501 1_555 V O HOH . J HOH 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.935 ? metalc ? metalc16 T O HOH . F HOH 601 1_555 O MG MG . G MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.839 ? metalc ? metalc17 O MG MG . G MG 501 1_555 V O HOH . J HOH 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8RJW _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 3 MG C 1 501 202 MG MG . L 3 MG D 1 501 201 MG MG . M 3 MG D 1 502 301 MG MG . N 3 MG F 1 501 301 MG MG . O 3 MG G 1 501 301 MG MG . P 4 HOH B 1 501 74 HOH HOH . P 4 HOH B 2 502 77 HOH HOH . P 4 HOH B 3 503 42 HOH HOH . P 4 HOH B 4 504 41 HOH HOH . Q 4 HOH C 1 601 46 HOH HOH . Q 4 HOH C 2 602 40 HOH HOH . R 4 HOH D 1 601 51 HOH HOH . R 4 HOH D 2 602 48 HOH HOH . R 4 HOH D 3 603 52 HOH HOH . R 4 HOH D 4 604 54 HOH HOH . S 4 HOH E 1 501 58 HOH HOH . S 4 HOH E 2 502 62 HOH HOH . S 4 HOH E 3 503 49 HOH HOH . S 4 HOH E 4 504 61 HOH HOH . S 4 HOH E 5 505 60 HOH HOH . S 4 HOH E 6 506 63 HOH HOH . S 4 HOH E 7 507 55 HOH HOH . S 4 HOH E 8 508 53 HOH HOH . S 4 HOH E 9 509 56 HOH HOH . T 4 HOH F 1 601 67 HOH HOH . T 4 HOH F 2 602 70 HOH HOH . T 4 HOH F 3 603 66 HOH HOH . T 4 HOH F 4 604 68 HOH HOH . T 4 HOH F 5 605 71 HOH HOH . T 4 HOH F 6 606 59 HOH HOH . T 4 HOH F 7 607 65 HOH HOH . U 4 HOH G 1 601 72 HOH HOH . U 4 HOH G 2 602 73 HOH HOH . V 4 HOH J 1 101 78 HOH HOH . V 4 HOH J 2 102 43 HOH HOH . V 4 HOH J 3 103 64 HOH HOH . V 4 HOH J 4 104 44 HOH HOH . V 4 HOH J 5 105 47 HOH HOH . V 4 HOH J 6 106 45 HOH HOH . V 4 HOH J 7 107 75 HOH HOH . V 4 HOH J 8 108 69 HOH HOH . V 4 HOH J 9 109 50 HOH HOH . V 4 HOH J 10 110 76 HOH HOH . V 4 HOH J 11 111 57 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 3 _atom_site.Cartn_x 158.1 _atom_site.Cartn_y 160.64 _atom_site.Cartn_z 186.999 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 63.32 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 501 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 120 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #