data_8RL7 # _model_server_result.job_id c4PGKmMh1g8n0fpTPD0V3A _model_server_result.datetime_utc '2025-03-13 20:53:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8rl7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 8RL7 # _exptl.entry_id 8RL7 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 510.615 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8RL7 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RL7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 12 B CYS 11 1_555 B SG CYS 12 D CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 23 B CYS 22 1_555 A SG CYS 97 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 B SG CYS 23 D CYS 22 1_555 B SG CYS 97 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 192 n n C1B O1B LMT sing 193 n n C1B O5B LMT sing 194 n n C1B H1B LMT sing 195 n n C2B C3B LMT sing 196 n n C2B O2B LMT sing 197 n n C2B H2B LMT sing 198 n n C3B C4B LMT sing 199 n n C3B O3B LMT sing 200 n n C3B H3B LMT sing 201 n n C4B C5B LMT sing 202 n n C4B O4' LMT sing 203 n n C4B H4B LMT sing 204 n n C5B C6B LMT sing 205 n n C5B O5B LMT sing 206 n n C5B H5B LMT sing 207 n n C6B O6B LMT sing 208 n n C6B "H6'2" LMT sing 209 n n C6B "H6'1" LMT sing 210 n n O1B C4' LMT sing 211 n n O2B H2O1 LMT sing 212 n n O3B H3O1 LMT sing 213 n n O4' H4O1 LMT sing 214 n n O6B H6B LMT sing 215 n n C1' C2' LMT sing 216 n n C1' O1' LMT sing 217 n n C1' O5' LMT sing 218 n n C1' H1' LMT sing 219 n n C2' C3' LMT sing 220 n n C2' O2' LMT sing 221 n n C2' H2' LMT sing 222 n n C3' C4' LMT sing 223 n n C3' O3' LMT sing 224 n n C3' H3' LMT sing 225 n n C4' C5' LMT sing 226 n n C4' H4' LMT sing 227 n n C5' C6' LMT sing 228 n n C5' O5' LMT sing 229 n n C5' H5' LMT sing 230 n n C6' O6' LMT sing 231 n n C6' H6D LMT sing 232 n n C6' H6E LMT sing 233 n n O1' C1 LMT sing 234 n n O2' H2O2 LMT sing 235 n n O3' H3O2 LMT sing 236 n n O6' H6' LMT sing 237 n n C1 C2 LMT sing 238 n n C1 H12 LMT sing 239 n n C1 H11 LMT sing 240 n n C2 C3 LMT sing 241 n n C2 H22 LMT sing 242 n n C2 H21 LMT sing 243 n n C3 C4 LMT sing 244 n n C3 H32 LMT sing 245 n n C3 H31 LMT sing 246 n n C4 C5 LMT sing 247 n n C4 H42 LMT sing 248 n n C4 H41 LMT sing 249 n n C5 C6 LMT sing 250 n n C5 H52 LMT sing 251 n n C5 H51 LMT sing 252 n n C6 C7 LMT sing 253 n n C6 H62 LMT sing 254 n n C6 H61 LMT sing 255 n n C7 C8 LMT sing 256 n n C7 H72 LMT sing 257 n n C7 H71 LMT sing 258 n n C8 C9 LMT sing 259 n n C8 H82 LMT sing 260 n n C8 H81 LMT sing 261 n n C9 C10 LMT sing 262 n n C9 H92 LMT sing 263 n n C9 H91 LMT sing 264 n n C10 C11 LMT sing 265 n n C10 H102 LMT sing 266 n n C10 H101 LMT sing 267 n n C11 C12 LMT sing 268 n n C11 H112 LMT sing 269 n n C11 H111 LMT sing 270 n n C12 H123 LMT sing 271 n n C12 H122 LMT sing 272 n n C12 H121 LMT sing 273 n n # _atom_sites.entry_id 8RL7 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 LMT A 1 601 601 LMT LMT . F 3 LMT C 1 601 601 LMT LMT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1B LMT . . . F 3 114.569 164.505 164.872 1 51.93 ? O1B LMT 601 C 1 HETATM 2 C C1' LMT . . . F 3 111.616 162.595 167.057 1 51.93 ? C1' LMT 601 C 1 HETATM 3 C C2' LMT . . . F 3 112.673 163.343 167.898 1 51.93 ? C2' LMT 601 C 1 HETATM 4 C C3' LMT . . . F 3 113.541 164.28 167.014 1 51.93 ? C3' LMT 601 C 1 HETATM 5 C C4' LMT . . . F 3 114.046 163.548 165.763 1 51.93 ? C4' LMT 601 C 1 HETATM 6 C C5' LMT . . . F 3 112.79 162.934 165.116 1 51.93 ? C5' LMT 601 C 1 HETATM 7 C C6' LMT . . . F 3 113.017 162.353 163.747 1 51.93 ? C6' LMT 601 C 1 HETATM 8 O O1' LMT . . . F 3 111.03 161.612 167.802 1 51.93 ? O1' LMT 601 C 1 HETATM 9 O O2' LMT . . . F 3 112.01 164.111 168.821 1 51.93 ? O2' LMT 601 C 1 HETATM 10 O O3' LMT . . . F 3 114.6 164.761 167.724 1 51.93 ? O3' LMT 601 C 1 HETATM 11 O O5' LMT . . . F 3 112.247 161.958 165.96 1 51.93 ? O5' LMT 601 C 1 HETATM 12 O O6' LMT . . . F 3 114.367 162.429 163.523 1 51.93 ? O6' LMT 601 C 1 HETATM 13 C C1 LMT . . . F 3 111.776 160.423 167.931 1 51.93 ? C1 LMT 601 C 1 HETATM 14 C C2 LMT . . . F 3 111.445 159.919 169.304 1 51.93 ? C2 LMT 601 C 1 HETATM 15 C C3 LMT . . . F 3 111.313 158.439 169.465 1 51.93 ? C3 LMT 601 C 1 HETATM 16 C C4 LMT . . . F 3 110.055 158.01 168.753 1 51.93 ? C4 LMT 601 C 1 HETATM 17 C C5 LMT . . . F 3 109.752 156.576 169.033 1 51.93 ? C5 LMT 601 C 1 HETATM 18 C C6 LMT . . . F 3 108.3 156.353 169.304 1 51.93 ? C6 LMT 601 C 1 HETATM 19 C C7 LMT . . . F 3 107.513 156.484 168.033 1 51.93 ? C7 LMT 601 C 1 HETATM 20 C C8 LMT . . . F 3 107.314 155.131 167.446 1 51.93 ? C8 LMT 601 C 1 HETATM 21 C C9 LMT . . . F 3 106.916 155.142 166.006 1 51.93 ? C9 LMT 601 C 1 HETATM 22 C C10 LMT . . . F 3 106.326 153.796 165.694 1 51.93 ? C10 LMT 601 C 1 HETATM 23 C C11 LMT . . . F 3 106.401 153.492 164.232 1 51.93 ? C11 LMT 601 C 1 HETATM 24 C C12 LMT . . . F 3 105.542 152.329 163.865 1 51.93 ? C12 LMT 601 C 1 HETATM 25 H H1' LMT . . . F 3 110.983 163.252 166.727 1 51.93 ? H1' LMT 601 C 1 HETATM 26 H H2' LMT . . . F 3 113.264 162.673 168.274 1 51.93 ? H2' LMT 601 C 1 HETATM 27 H H3' LMT . . . F 3 112.944 164.973 166.692 1 51.93 ? H3' LMT 601 C 1 HETATM 28 H H4' LMT . . . F 3 114.673 162.853 166.017 1 51.93 ? H4' LMT 601 C 1 HETATM 29 H H5' LMT . . . F 3 112.18 163.678 164.992 1 51.93 ? H5' LMT 601 C 1 HETATM 30 H H6D LMT . . . F 3 112.492 162.858 163.106 1 51.93 ? H6D LMT 601 C 1 HETATM 31 H H6E LMT . . . F 3 112.621 161.47 163.694 1 51.93 ? H6E LMT 601 C 1 HETATM 32 H H2O2 LMT . . . F 3 112.608 164.512 169.273 1 51.93 ? H2O2 LMT 601 C 1 HETATM 33 H H6' LMT . . . F 3 114.713 161.809 163.99 1 51.93 ? H6' LMT 601 C 1 HETATM 34 H H12 LMT . . . F 3 112.734 160.532 167.831 1 51.93 ? H12 LMT 601 C 1 HETATM 35 H H11 LMT . . . F 3 111.541 159.791 167.236 1 51.93 ? H11 LMT 601 C 1 HETATM 36 H H22 LMT . . . F 3 110.615 160.332 169.586 1 51.93 ? H22 LMT 601 C 1 HETATM 37 H H21 LMT . . . F 3 112.121 160.241 169.921 1 51.93 ? H21 LMT 601 C 1 HETATM 38 H H32 LMT . . . F 3 111.278 158.178 170.398 1 51.93 ? H32 LMT 601 C 1 HETATM 39 H H31 LMT . . . F 3 112.077 157.971 169.094 1 51.93 ? H31 LMT 601 C 1 HETATM 40 H H42 LMT . . . F 3 110.144 158.163 167.8 1 51.93 ? H42 LMT 601 C 1 HETATM 41 H H41 LMT . . . F 3 109.311 158.568 169.025 1 51.93 ? H41 LMT 601 C 1 HETATM 42 H H52 LMT . . . F 3 110.279 156.272 169.788 1 51.93 ? H52 LMT 601 C 1 HETATM 43 H H51 LMT . . . F 3 110.037 156.035 168.28 1 51.93 ? H51 LMT 601 C 1 HETATM 44 H H62 LMT . . . F 3 107.975 156.98 169.969 1 51.93 ? H62 LMT 601 C 1 HETATM 45 H H61 LMT . . . F 3 108.155 155.481 169.7 1 51.93 ? H61 LMT 601 C 1 HETATM 46 H H72 LMT . . . F 3 107.971 157.066 167.408 1 51.93 ? H72 LMT 601 C 1 HETATM 47 H H71 LMT . . . F 3 106.667 156.919 168.206 1 51.93 ? H71 LMT 601 C 1 HETATM 48 H H82 LMT . . . F 3 106.641 154.655 167.958 1 51.93 ? H82 LMT 601 C 1 HETATM 49 H H81 LMT . . . F 3 108.123 154.609 167.55 1 51.93 ? H81 LMT 601 C 1 HETATM 50 H H92 LMT . . . F 3 107.671 155.329 165.426 1 51.93 ? H92 LMT 601 C 1 HETATM 51 H H91 LMT . . . F 3 106.28 155.852 165.827 1 51.93 ? H91 LMT 601 C 1 HETATM 52 H H102 LMT . . . F 3 105.405 153.759 165.996 1 51.93 ? H102 LMT 601 C 1 HETATM 53 H H101 LMT . . . F 3 106.784 153.113 166.206 1 51.93 ? H101 LMT 601 C 1 HETATM 54 H H112 LMT . . . F 3 107.323 153.313 163.994 1 51.93 ? H112 LMT 601 C 1 HETATM 55 H H111 LMT . . . F 3 106.137 154.273 163.726 1 51.93 ? H111 LMT 601 C 1 HETATM 56 H H123 LMT . . . F 3 105.72 152.026 162.961 1 51.93 ? H123 LMT 601 C 1 HETATM 57 H H122 LMT . . . F 3 104.599 152.551 163.912 1 51.93 ? H122 LMT 601 C 1 HETATM 58 H H121 LMT . . . F 3 105.705 151.584 164.464 1 51.93 ? H121 LMT 601 C 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 58 #