data_8RLC # _model_server_result.job_id opx4-zQBsvZUP4nHrOMxhA _model_server_result.datetime_utc '2025-02-20 10:18:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8rlc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 8RLC # _exptl.entry_id 8RLC _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 510.615 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8RLC _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RLC _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 11 D CYS 11 1_555 C SG CYS 12 C CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 B SG CYS 22 D CYS 22 1_555 B SG CYS 96 D CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 C SG CYS 23 C CYS 22 1_555 C SG CYS 96 C CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 192 n n C1B O1B LMT sing 193 n n C1B O5B LMT sing 194 n n C1B H1B LMT sing 195 n n C2B C3B LMT sing 196 n n C2B O2B LMT sing 197 n n C2B H2B LMT sing 198 n n C3B C4B LMT sing 199 n n C3B O3B LMT sing 200 n n C3B H3B LMT sing 201 n n C4B C5B LMT sing 202 n n C4B O4' LMT sing 203 n n C4B H4B LMT sing 204 n n C5B C6B LMT sing 205 n n C5B O5B LMT sing 206 n n C5B H5B LMT sing 207 n n C6B O6B LMT sing 208 n n C6B "H6'2" LMT sing 209 n n C6B "H6'1" LMT sing 210 n n O1B C4' LMT sing 211 n n O2B H2O1 LMT sing 212 n n O3B H3O1 LMT sing 213 n n O4' H4O1 LMT sing 214 n n O6B H6B LMT sing 215 n n C1' C2' LMT sing 216 n n C1' O1' LMT sing 217 n n C1' O5' LMT sing 218 n n C1' H1' LMT sing 219 n n C2' C3' LMT sing 220 n n C2' O2' LMT sing 221 n n C2' H2' LMT sing 222 n n C3' C4' LMT sing 223 n n C3' O3' LMT sing 224 n n C3' H3' LMT sing 225 n n C4' C5' LMT sing 226 n n C4' H4' LMT sing 227 n n C5' C6' LMT sing 228 n n C5' O5' LMT sing 229 n n C5' H5' LMT sing 230 n n C6' O6' LMT sing 231 n n C6' H6D LMT sing 232 n n C6' H6E LMT sing 233 n n O1' C1 LMT sing 234 n n O2' H2O2 LMT sing 235 n n O3' H3O2 LMT sing 236 n n O6' H6' LMT sing 237 n n C1 C2 LMT sing 238 n n C1 H12 LMT sing 239 n n C1 H11 LMT sing 240 n n C2 C3 LMT sing 241 n n C2 H22 LMT sing 242 n n C2 H21 LMT sing 243 n n C3 C4 LMT sing 244 n n C3 H32 LMT sing 245 n n C3 H31 LMT sing 246 n n C4 C5 LMT sing 247 n n C4 H42 LMT sing 248 n n C4 H41 LMT sing 249 n n C5 C6 LMT sing 250 n n C5 H52 LMT sing 251 n n C5 H51 LMT sing 252 n n C6 C7 LMT sing 253 n n C6 H62 LMT sing 254 n n C6 H61 LMT sing 255 n n C7 C8 LMT sing 256 n n C7 H72 LMT sing 257 n n C7 H71 LMT sing 258 n n C8 C9 LMT sing 259 n n C8 H82 LMT sing 260 n n C8 H81 LMT sing 261 n n C9 C10 LMT sing 262 n n C9 H92 LMT sing 263 n n C9 H91 LMT sing 264 n n C10 C11 LMT sing 265 n n C10 H102 LMT sing 266 n n C10 H101 LMT sing 267 n n C11 C12 LMT sing 268 n n C11 H112 LMT sing 269 n n C11 H111 LMT sing 270 n n C12 H123 LMT sing 271 n n C12 H122 LMT sing 272 n n C12 H121 LMT sing 273 n n # _atom_sites.entry_id 8RLC _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id E _pdbx_nonpoly_scheme.entity_id 5 _pdbx_nonpoly_scheme.mon_id LMT _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 601 _pdbx_nonpoly_scheme.auth_seq_num 601 _pdbx_nonpoly_scheme.pdb_mon_id LMT _pdbx_nonpoly_scheme.auth_mon_id LMT _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1B LMT . . . E 5 161.329 160.319 175.457 1 39.92 ? O1B LMT 601 A 1 HETATM 2 C C1' LMT . . . E 5 161.803 161.958 179.232 1 39.92 ? C1' LMT 601 A 1 HETATM 3 C C2' LMT . . . E 5 162.3 162.84 178.065 1 39.92 ? C2' LMT 601 A 1 HETATM 4 C C3' LMT . . . E 5 161.806 162.303 176.694 1 39.92 ? C3' LMT 601 A 1 HETATM 5 C C4' LMT . . . E 5 162.046 160.792 176.573 1 39.92 ? C4' LMT 601 A 1 HETATM 6 C C5' LMT . . . E 5 161.416 160.179 177.836 1 39.92 ? C5' LMT 601 A 1 HETATM 7 C C6' LMT . . . E 5 161.333 158.678 177.824 1 39.92 ? C6' LMT 601 A 1 HETATM 8 O O1' LMT . . . E 5 162.445 162.297 180.389 1 39.92 ? O1' LMT 601 A 1 HETATM 9 O O2' LMT . . . E 5 161.79 164.102 178.243 1 39.92 ? O2' LMT 601 A 1 HETATM 10 O O3' LMT . . . E 5 162.431 162.952 175.672 1 39.92 ? O3' LMT 601 A 1 HETATM 11 O O5' LMT . . . E 5 162.117 160.601 178.971 1 39.92 ? O5' LMT 601 A 1 HETATM 12 O O6' LMT . . . E 5 161.831 158.28 176.61 1 39.92 ? O6' LMT 601 A 1 HETATM 13 C C1 LMT . . . E 5 163.745 161.771 180.543 1 39.92 ? C1 LMT 601 A 1 HETATM 14 C C2 LMT . . . E 5 164.538 162.894 181.141 1 39.92 ? C2 LMT 601 A 1 HETATM 15 C C3 LMT . . . E 5 165.695 162.511 182.006 1 39.92 ? C3 LMT 601 A 1 HETATM 16 C C4 LMT . . . E 5 165.145 162.075 183.339 1 39.92 ? C4 LMT 601 A 1 HETATM 17 C C5 LMT . . . E 5 166.252 161.835 184.31 1 39.92 ? C5 LMT 601 A 1 HETATM 18 C C6 LMT . . . E 5 165.777 161.871 185.726 1 39.92 ? C6 LMT 601 A 1 HETATM 19 C C7 LMT . . . E 5 164.932 160.664 186.016 1 39.92 ? C7 LMT 601 A 1 HETATM 20 C C8 LMT . . . E 5 165.612 159.824 187.041 1 39.92 ? C8 LMT 601 A 1 HETATM 21 C C9 LMT . . . E 5 165.036 158.453 187.18 1 39.92 ? C9 LMT 601 A 1 HETATM 22 C C10 LMT . . . E 5 165.667 157.816 188.386 1 39.92 ? C10 LMT 601 A 1 HETATM 23 C C11 LMT . . . E 5 165.617 156.324 188.3 1 39.92 ? C11 LMT 601 A 1 HETATM 24 C C12 LMT . . . E 5 166.125 155.679 189.545 1 39.92 ? C12 LMT 601 A 1 HETATM 25 H H1' LMT . . . E 5 160.84 162.059 179.287 1 39.92 ? H1' LMT 601 A 1 HETATM 26 H H2' LMT . . . E 5 163.268 162.789 178.063 1 39.92 ? H2' LMT 601 A 1 HETATM 27 H H3' LMT . . . E 5 160.843 162.419 176.693 1 39.92 ? H3' LMT 601 A 1 HETATM 28 H H4' LMT . . . E 5 162.998 160.609 176.543 1 39.92 ? H4' LMT 601 A 1 HETATM 29 H H5' LMT . . . E 5 160.5 160.497 177.843 1 39.92 ? H5' LMT 601 A 1 HETATM 30 H H6D LMT . . . E 5 160.41 158.418 177.962 1 39.92 ? H6D LMT 601 A 1 HETATM 31 H H6E LMT . . . E 5 161.771 158.317 178.609 1 39.92 ? H6E LMT 601 A 1 HETATM 32 H H2O2 LMT . . . E 5 162.337 164.511 178.749 1 39.92 ? H2O2 LMT 601 A 1 HETATM 33 H H6' LMT . . . E 5 162.677 158.327 176.68 1 39.92 ? H6' LMT 601 A 1 HETATM 34 H H12 LMT . . . E 5 164.16 161.464 179.721 1 39.92 ? H12 LMT 601 A 1 HETATM 35 H H11 LMT . . . E 5 163.736 160.983 181.108 1 39.92 ? H11 LMT 601 A 1 HETATM 36 H H22 LMT . . . E 5 163.935 163.447 181.663 1 39.92 ? H22 LMT 601 A 1 HETATM 37 H H21 LMT . . . E 5 164.858 163.462 180.423 1 39.92 ? H21 LMT 601 A 1 HETATM 38 H H32 LMT . . . E 5 166.32 163.244 182.122 1 39.92 ? H32 LMT 601 A 1 HETATM 39 H H31 LMT . . . E 5 166.211 161.791 181.611 1 39.92 ? H31 LMT 601 A 1 HETATM 40 H H42 LMT . . . E 5 164.601 161.28 183.229 1 39.92 ? H42 LMT 601 A 1 HETATM 41 H H41 LMT . . . E 5 164.538 162.744 183.685 1 39.92 ? H41 LMT 601 A 1 HETATM 42 H H52 LMT . . . E 5 166.948 162.498 184.181 1 39.92 ? H52 LMT 601 A 1 HETATM 43 H H51 LMT . . . E 5 166.667 160.98 184.119 1 39.92 ? H51 LMT 601 A 1 HETATM 44 H H62 LMT . . . E 5 165.274 162.683 185.898 1 39.92 ? H62 LMT 601 A 1 HETATM 45 H H61 LMT . . . E 5 166.526 161.915 186.339 1 39.92 ? H61 LMT 601 A 1 HETATM 46 H H72 LMT . . . E 5 164.777 160.156 185.205 1 39.92 ? H72 LMT 601 A 1 HETATM 47 H H71 LMT . . . E 5 164.05 160.935 186.316 1 39.92 ? H71 LMT 601 A 1 HETATM 48 H H82 LMT . . . E 5 165.577 160.273 187.9 1 39.92 ? H82 LMT 601 A 1 HETATM 49 H H81 LMT . . . E 5 166.556 159.753 186.833 1 39.92 ? H81 LMT 601 A 1 HETATM 50 H H92 LMT . . . E 5 165.193 157.917 186.388 1 39.92 ? H92 LMT 601 A 1 HETATM 51 H H91 LMT . . . E 5 164.071 158.491 187.27 1 39.92 ? H91 LMT 601 A 1 HETATM 52 H H102 LMT . . . E 5 165.221 158.119 189.193 1 39.92 ? H102 LMT 601 A 1 HETATM 53 H H101 LMT . . . E 5 166.582 158.122 188.477 1 39.92 ? H101 LMT 601 A 1 HETATM 54 H H112 LMT . . . E 5 166.141 156.035 187.537 1 39.92 ? H112 LMT 601 A 1 HETATM 55 H H111 LMT . . . E 5 164.706 156.041 188.127 1 39.92 ? H111 LMT 601 A 1 HETATM 56 H H123 LMT . . . E 5 166.32 154.739 189.404 1 39.92 ? H123 LMT 601 A 1 HETATM 57 H H122 LMT . . . E 5 165.479 155.731 190.265 1 39.92 ? H122 LMT 601 A 1 HETATM 58 H H121 LMT . . . E 5 166.941 156.109 189.842 1 39.92 ? H121 LMT 601 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 586 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 58 #