data_8RME # _model_server_result.job_id wGfbn93VSPwNTS6uY7kycg _model_server_result.datetime_utc '2024-12-23 05:11:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8rme # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":201}' # _entry.id 8RME # _exptl.entry_id 8RME _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 55.845 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8RME _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RME _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details nonameric _pdbx_struct_assembly.oligomeric_count 9 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 J N N ? 6 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C HIS 204 A HIS 257 1_555 A N LLP 205 A LLP 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C LLP 205 A LLP 258 1_555 A N ILE 206 A ILE 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale3 E OG SER 37 C SER 37 1_555 K P24 8Q1 . C 8Q1 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.557 ? covale ? covale4 F C HIS 204 E HIS 257 1_555 F N LLP 205 E LLP 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 F C LLP 205 E LLP 258 1_555 F N ILE 206 E ILE 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 H OG SER 37 G SER 37 1_555 L P24 8Q1 . G 8Q1 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.602 ? metalc ? metalc1 A SG CYS 328 A CYS 381 1_555 J FE FE2 . D FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc2 C OD1 ASP 39 D ASP 71 1_555 J FE FE2 . D FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc3 C OD2 ASP 39 D ASP 71 1_555 J FE FE2 . D FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc4 C SG CYS 63 D CYS 95 1_555 J FE FE2 . D FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc5 F SG CYS 328 E CYS 381 1_555 M FE FE2 . H FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc6 I OD1 ASP 39 H ASP 71 1_555 M FE FE2 . H FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc7 I OD2 ASP 39 H ASP 71 1_555 M FE FE2 . H FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc8 I SG CYS 63 H CYS 95 1_555 M FE FE2 . H FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc9 I NE2 HIS 105 H HIS 137 1_555 M FE FE2 . H FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? # _chem_comp.formula 'Fe 2' _chem_comp.formula_weight 55.845 _chem_comp.id FE2 _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8RME _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code J 6 FE2 D 1 201 201 FE2 FE2 . K 7 8Q1 C 1 101 101 8Q1 8Q1 . L 7 8Q1 G 1 101 101 8Q1 8Q1 . M 6 FE2 H 1 201 201 FE2 FE2 . N 8 HOH A 1 601 603 HOH HOH . N 8 HOH A 2 602 601 HOH HOH . N 8 HOH A 3 603 602 HOH HOH . N 8 HOH A 4 604 607 HOH HOH . N 8 HOH A 5 605 604 HOH HOH . N 8 HOH A 6 606 617 HOH HOH . N 8 HOH A 7 607 606 HOH HOH . N 8 HOH A 8 608 616 HOH HOH . N 8 HOH A 9 609 615 HOH HOH . N 8 HOH A 10 610 609 HOH HOH . N 8 HOH A 11 611 633 HOH HOH . N 8 HOH A 12 612 612 HOH HOH . N 8 HOH A 13 613 628 HOH HOH . N 8 HOH A 14 614 651 HOH HOH . N 8 HOH A 15 615 637 HOH HOH . N 8 HOH A 16 616 610 HOH HOH . N 8 HOH A 17 617 620 HOH HOH . N 8 HOH A 18 618 619 HOH HOH . N 8 HOH A 19 619 57 HOH HOH . N 8 HOH A 20 620 611 HOH HOH . N 8 HOH A 21 621 618 HOH HOH . N 8 HOH A 22 622 622 HOH HOH . N 8 HOH A 23 623 627 HOH HOH . N 8 HOH A 24 624 625 HOH HOH . N 8 HOH A 25 625 631 HOH HOH . N 8 HOH A 26 626 621 HOH HOH . N 8 HOH A 27 627 626 HOH HOH . N 8 HOH A 28 628 624 HOH HOH . N 8 HOH A 29 629 623 HOH HOH . N 8 HOH A 30 630 635 HOH HOH . N 8 HOH A 31 631 629 HOH HOH . N 8 HOH A 32 632 419 HOH HOH . N 8 HOH A 33 633 643 HOH HOH . N 8 HOH A 34 634 641 HOH HOH . N 8 HOH A 35 635 647 HOH HOH . N 8 HOH A 36 636 640 HOH HOH . N 8 HOH A 37 637 644 HOH HOH . N 8 HOH A 38 638 638 HOH HOH . N 8 HOH A 39 639 646 HOH HOH . N 8 HOH A 40 640 690 HOH HOH . N 8 HOH A 41 641 639 HOH HOH . N 8 HOH A 42 642 630 HOH HOH . N 8 HOH A 43 643 652 HOH HOH . N 8 HOH A 44 644 56 HOH HOH . N 8 HOH A 45 645 648 HOH HOH . N 8 HOH A 46 646 650 HOH HOH . N 8 HOH A 47 647 655 HOH HOH . N 8 HOH A 48 648 53 HOH HOH . N 8 HOH A 49 649 674 HOH HOH . N 8 HOH A 50 650 669 HOH HOH . N 8 HOH A 51 651 653 HOH HOH . N 8 HOH A 52 652 657 HOH HOH . N 8 HOH A 53 653 663 HOH HOH . N 8 HOH A 54 654 659 HOH HOH . N 8 HOH A 55 655 665 HOH HOH . N 8 HOH A 56 656 654 HOH HOH . N 8 HOH A 57 657 666 HOH HOH . N 8 HOH A 58 658 22 HOH HOH . N 8 HOH A 59 659 667 HOH HOH . N 8 HOH A 60 660 668 HOH HOH . N 8 HOH A 61 661 660 HOH HOH . N 8 HOH A 62 662 664 HOH HOH . N 8 HOH A 63 663 43 HOH HOH . N 8 HOH A 64 664 675 HOH HOH . O 8 HOH B 1 101 101 HOH HOH . O 8 HOH B 2 102 104 HOH HOH . O 8 HOH B 3 103 102 HOH HOH . O 8 HOH B 4 104 107 HOH HOH . O 8 HOH B 5 105 741 HOH HOH . O 8 HOH B 6 106 106 HOH HOH . O 8 HOH B 7 107 109 HOH HOH . O 8 HOH B 8 108 110 HOH HOH . O 8 HOH B 9 109 108 HOH HOH . O 8 HOH B 10 110 111 HOH HOH . O 8 HOH B 11 111 112 HOH HOH . O 8 HOH B 12 112 114 HOH HOH . P 8 HOH D 1 301 301 HOH HOH . P 8 HOH D 2 302 302 HOH HOH . P 8 HOH D 3 303 303 HOH HOH . P 8 HOH D 4 304 304 HOH HOH . Q 8 HOH I 1 301 301 HOH HOH . R 8 HOH E 1 601 647 HOH HOH . R 8 HOH E 2 602 627 HOH HOH . R 8 HOH E 3 603 612 HOH HOH . R 8 HOH E 4 604 675 HOH HOH . R 8 HOH E 5 605 666 HOH HOH . R 8 HOH E 6 606 657 HOH HOH . R 8 HOH E 7 607 669 HOH HOH . R 8 HOH E 8 608 668 HOH HOH . R 8 HOH E 9 609 607 HOH HOH . R 8 HOH E 10 610 641 HOH HOH . R 8 HOH E 11 611 408 HOH HOH . R 8 HOH E 12 612 651 HOH HOH . R 8 HOH E 13 613 609 HOH HOH . R 8 HOH E 14 614 656 HOH HOH . R 8 HOH E 15 615 723 HOH HOH . R 8 HOH E 16 616 645 HOH HOH . R 8 HOH E 17 617 628 HOH HOH . R 8 HOH E 18 618 679 HOH HOH . R 8 HOH E 19 619 681 HOH HOH . R 8 HOH E 20 620 692 HOH HOH . R 8 HOH E 21 621 608 HOH HOH . R 8 HOH E 22 622 42 HOH HOH . R 8 HOH E 23 623 648 HOH HOH . R 8 HOH E 24 624 642 HOH HOH . R 8 HOH E 25 625 685 HOH HOH . R 8 HOH E 26 626 663 HOH HOH . R 8 HOH E 27 627 734 HOH HOH . R 8 HOH E 28 628 701 HOH HOH . R 8 HOH E 29 629 667 HOH HOH . R 8 HOH E 30 630 1 HOH HOH . R 8 HOH E 31 631 54 HOH HOH . R 8 HOH E 32 632 698 HOH HOH . R 8 HOH E 33 633 717 HOH HOH . R 8 HOH E 34 634 646 HOH HOH . R 8 HOH E 35 635 113 HOH HOH . R 8 HOH E 36 636 673 HOH HOH . R 8 HOH E 37 637 55 HOH HOH . R 8 HOH E 38 638 625 HOH HOH . R 8 HOH E 39 639 738 HOH HOH . R 8 HOH E 40 640 708 HOH HOH . R 8 HOH E 41 641 707 HOH HOH . R 8 HOH E 42 642 630 HOH HOH . R 8 HOH E 43 643 632 HOH HOH . R 8 HOH E 44 644 656 HOH HOH . R 8 HOH E 45 645 727 HOH HOH . R 8 HOH E 46 646 662 HOH HOH . R 8 HOH E 47 647 44 HOH HOH . R 8 HOH E 48 648 712 HOH HOH . R 8 HOH E 49 649 740 HOH HOH . R 8 HOH E 50 650 704 HOH HOH . R 8 HOH E 51 651 683 HOH HOH . R 8 HOH E 52 652 36 HOH HOH . R 8 HOH E 53 653 633 HOH HOH . R 8 HOH E 54 654 722 HOH HOH . R 8 HOH E 55 655 670 HOH HOH . R 8 HOH E 56 656 716 HOH HOH . R 8 HOH E 57 657 115 HOH HOH . R 8 HOH E 58 658 735 HOH HOH . R 8 HOH E 59 659 745 HOH HOH . R 8 HOH E 60 660 710 HOH HOH . R 8 HOH E 61 661 752 HOH HOH . R 8 HOH E 62 662 719 HOH HOH . R 8 HOH E 63 663 51 HOH HOH . R 8 HOH E 64 664 729 HOH HOH . R 8 HOH E 65 665 37 HOH HOH . R 8 HOH E 66 666 49 HOH HOH . R 8 HOH E 67 667 689 HOH HOH . R 8 HOH E 68 668 670 HOH HOH . R 8 HOH E 69 669 50 HOH HOH . S 8 HOH F 1 101 402 HOH HOH . S 8 HOH F 2 102 411 HOH HOH . S 8 HOH F 3 103 52 HOH HOH . S 8 HOH F 4 104 407 HOH HOH . S 8 HOH F 5 105 420 HOH HOH . S 8 HOH F 6 106 414 HOH HOH . S 8 HOH F 7 107 421 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE2 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 6 _atom_site.Cartn_x 139.342 _atom_site.Cartn_y 147.933 _atom_site.Cartn_z 130.297 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 108.91 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE2 _atom_site.auth_seq_id 201 _atom_site.auth_asym_id H _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 42 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #