data_8RMI
#
_model_server_result.job_id            E-zPkhkUUM9KPrsbSlMHoA 
_model_server_result.datetime_utc      '2025-01-28 04:04:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8rmi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":902}' 
#
_entry.id    8RMI 
#
_exptl.entry_id    8RMI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              292.369 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'octyl beta-D-glucopyranoside' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8RMI 
_cell.length_a            93.515 
_cell.length_b            93.515 
_cell.length_c            177.817 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8RMI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 798 A CYS 798 1_555 A SG CYS 804 A CYS 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? 
metalc ? metalc1 D N01 A1H1Z . A A1H1Z 903 1_555 G FE FE . A FE 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? 
metalc ? metalc2 D N03 A1H1Z . A A1H1Z 903 1_555 G FE FE . A FE 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? 
metalc ? metalc3 D N05 A1H1Z . A A1H1Z 903 1_555 G FE FE . A FE 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.621 ? 
metalc ? metalc4 D O03 A1H1Z . A A1H1Z 903 1_555 G FE FE . A FE 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? 
metalc ? metalc5 D O05 A1H1Z . A A1H1Z 903 1_555 G FE FE . A FE 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.704 ? 
metalc ? metalc6 D O08 A1H1Z . A A1H1Z 903 1_555 G FE FE . A FE 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.702 ? 
metalc ? metalc7 D O09 A1H1Z . A A1H1Z 903 1_555 G FE FE . A FE 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.762 ? 
#
_chem_comp.formula           'C14 H28 O6' 
_chem_comp.formula_weight    292.369 
_chem_comp.id                BOG 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              'octyl beta-D-glucopyranoside' 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     'Beta-Octylglucoside;octyl beta-D-glucoside;octyl D-glucoside;octyl glucoside' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 BOG sing 225 n n 
C1 C2 BOG sing 226 n n 
C1 O5 BOG sing 227 n n 
C1 H1 BOG sing 228 n n 
O1 C1' BOG sing 229 n n 
C2 O2 BOG sing 230 n n 
C2 C3 BOG sing 231 n n 
C2 H2 BOG sing 232 n n 
O2 HO2 BOG sing 233 n n 
C3 O3 BOG sing 234 n n 
C3 C4 BOG sing 235 n n 
C3 H3 BOG sing 236 n n 
O3 HO3 BOG sing 237 n n 
C4 O4 BOG sing 238 n n 
C4 C5 BOG sing 239 n n 
C4 H4 BOG sing 240 n n 
O4 HO4 BOG sing 241 n n 
C5 O5 BOG sing 242 n n 
C5 C6 BOG sing 243 n n 
C5 H5 BOG sing 244 n n 
C6 O6 BOG sing 245 n n 
C6 H61 BOG sing 246 n n 
C6 H62 BOG sing 247 n n 
O6 HO6 BOG sing 248 n n 
C1' C2' BOG sing 249 n n 
C1' "H1'1" BOG sing 250 n n 
C1' "H1'2" BOG sing 251 n n 
C2' C3' BOG sing 252 n n 
C2' "H2'1" BOG sing 253 n n 
C2' "H2'2" BOG sing 254 n n 
C3' C4' BOG sing 255 n n 
C3' "H3'1" BOG sing 256 n n 
C3' "H3'2" BOG sing 257 n n 
C4' C5' BOG sing 258 n n 
C4' "H4'1" BOG sing 259 n n 
C4' "H4'2" BOG sing 260 n n 
C5' C6' BOG sing 261 n n 
C5' "H5'1" BOG sing 262 n n 
C5' "H5'2" BOG sing 263 n n 
C6' C7' BOG sing 264 n n 
C6' "H6'1" BOG sing 265 n n 
C6' "H6'2" BOG sing 266 n n 
C7' C8' BOG sing 267 n n 
C7' "H7'1" BOG sing 268 n n 
C7' "H7'2" BOG sing 269 n n 
C8' "H8'1" BOG sing 270 n n 
C8' "H8'2" BOG sing 271 n n 
C8' "H8'3" BOG sing 272 n n 
#
_pdbx_chem_comp_identifier.comp_id            BOG 
_pdbx_chem_comp_identifier.identifier         b-octylglucoside 
_pdbx_chem_comp_identifier.type               'IUPAC CARBOHYDRATE SYMBOL' 
_pdbx_chem_comp_identifier.program            PDB-CARE 
_pdbx_chem_comp_identifier.program_version    1 
#
_atom_sites.entry_id                     8RMI 
_atom_sites.fract_transf_matrix[1][1]    0.010693 
_atom_sites.fract_transf_matrix[1][2]    0.006174 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012348 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005624 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 BOG A 1 901 904 BOG BOG . 
C 2 BOG A 1 902 905 BOG BOG . 
D 3 A1H1Z A 1 903 901 A1H1Z LIG . 
E 4 GOL A 1 904 902 GOL GOL . 
F 5 NH4 A 1 905 903 NH4 NH4 . 
G 6 FE A 1 906 1 FE FE . 
H 7 SO4 A 1 907 1 SO4 SO4 . 
I 7 SO4 A 1 908 2 SO4 SO4 . 
J 7 SO4 A 1 909 3 SO4 SO4 . 
K 7 SO4 A 1 910 4 SO4 SO4 . 
L 7 SO4 A 1 911 5 SO4 SO4 . 
M 7 SO4 A 1 912 6 SO4 SO4 . 
N 8 NA A 1 913 1 NA NA . 
O 9 HOH A 1 1001 20 HOH HOH . 
O 9 HOH A 2 1002 7 HOH HOH . 
O 9 HOH A 3 1003 8 HOH HOH . 
O 9 HOH A 4 1004 19 HOH HOH . 
O 9 HOH A 5 1005 39 HOH HOH . 
O 9 HOH A 6 1006 10 HOH HOH . 
O 9 HOH A 7 1007 17 HOH HOH . 
O 9 HOH A 8 1008 34 HOH HOH . 
O 9 HOH A 9 1009 24 HOH HOH . 
O 9 HOH A 10 1010 16 HOH HOH . 
O 9 HOH A 11 1011 35 HOH HOH . 
O 9 HOH A 12 1012 30 HOH HOH . 
O 9 HOH A 13 1013 2 HOH HOH . 
O 9 HOH A 14 1014 25 HOH HOH . 
O 9 HOH A 15 1015 4 HOH HOH . 
O 9 HOH A 16 1016 31 HOH HOH . 
O 9 HOH A 17 1017 14 HOH HOH . 
O 9 HOH A 18 1018 22 HOH HOH . 
O 9 HOH A 19 1019 11 HOH HOH . 
O 9 HOH A 20 1020 18 HOH HOH . 
O 9 HOH A 21 1021 5 HOH HOH . 
O 9 HOH A 22 1022 29 HOH HOH . 
O 9 HOH A 23 1023 32 HOH HOH . 
O 9 HOH A 24 1024 37 HOH HOH . 
O 9 HOH A 25 1025 15 HOH HOH . 
O 9 HOH A 26 1026 28 HOH HOH . 
O 9 HOH A 27 1027 3 HOH HOH . 
O 9 HOH A 28 1028 27 HOH HOH . 
O 9 HOH A 29 1029 26 HOH HOH . 
O 9 HOH A 30 1030 13 HOH HOH . 
O 9 HOH A 31 1031 23 HOH HOH . 
O 9 HOH A 32 1032 33 HOH HOH . 
O 9 HOH A 33 1033 12 HOH HOH . 
O 9 HOH A 34 1034 38 HOH HOH . 
O 9 HOH A 35 1035 40 HOH HOH . 
O 9 HOH A 36 1036 6 HOH HOH . 
O 9 HOH A 37 1037 9 HOH HOH . 
O 9 HOH A 38 1038 21 HOH HOH . 
O 9 HOH A 39 1039 36 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BOG . . . C 2 31.504 -54.56 14.174 1 158.78 ? C1 BOG 902 A 1 
HETATM 2 O O1 BOG . . . C 2 31.812 -53.541 13.248 1 145.48 ? O1 BOG 902 A 1 
HETATM 3 C C2 BOG . . . C 2 30.222 -54.249 14.965 1 152.03 ? C2 BOG 902 A 1 
HETATM 4 O O2 BOG . . . C 2 30.235 -52.978 15.633 1 125.97 ? O2 BOG 902 A 1 
HETATM 5 C C3 BOG . . . C 2 30.012 -55.375 15.996 1 147.55 ? C3 BOG 902 A 1 
HETATM 6 O O3 BOG . . . C 2 28.785 -55.166 16.703 1 112.83 ? O3 BOG 902 A 1 
HETATM 7 C C4 BOG . . . C 2 30.036 -56.768 15.326 1 165.78 ? C4 BOG 902 A 1 
HETATM 8 O O4 BOG . . . C 2 30.153 -57.787 16.32 1 182.89 ? O4 BOG 902 A 1 
HETATM 9 C C5 BOG . . . C 2 31.229 -56.949 14.344 1 160.88 ? C5 BOG 902 A 1 
HETATM 10 O O5 BOG . . . C 2 31.362 -55.787 13.466 1 162.19 ? O5 BOG 902 A 1 
HETATM 11 C C6 BOG . . . C 2 31.079 -58.162 13.45 1 147.22 ? C6 BOG 902 A 1 
HETATM 12 O O6 BOG . . . C 2 32.33 -58.535 12.894 1 138.53 ? O6 BOG 902 A 1 
HETATM 13 C C1' BOG . . . C 2 33.128 -53.593 12.653 1 144.35 ? C1' BOG 902 A 1 
HETATM 14 C C2' BOG . . . C 2 34.277 -53.474 13.663 1 149.37 ? C2' BOG 902 A 1 
HETATM 15 C C3' BOG . . . C 2 34.133 -52.329 14.695 1 137.6 ? C3' BOG 902 A 1 
HETATM 16 C C4' BOG . . . C 2 33.686 -52.708 16.128 1 118.51 ? C4' BOG 902 A 1 
HETATM 17 C C5' BOG . . . C 2 34.532 -52.148 17.281 1 114.2 ? C5' BOG 902 A 1 
HETATM 18 C C6' BOG . . . C 2 34.18 -50.74 17.807 1 105.08 ? C6' BOG 902 A 1 
HETATM 19 C C7' BOG . . . C 2 34.837 -50.353 19.161 1 97.32 ? C7' BOG 902 A 1 
HETATM 20 C C8' BOG . . . C 2 34.639 -48.936 19.719 1 87.36 ? C8' BOG 902 A 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           55 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           1230 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           20 
#