data_8RMI # _model_server_result.job_id xXhUuedELESemqHqAjuy6A _model_server_result.datetime_utc '2024-11-21 10:21:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8rmi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":909}' # _entry.id 8RMI # _exptl.entry_id 8RMI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8RMI _cell.length_a 93.515 _cell.length_b 93.515 _cell.length_c 177.817 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RMI _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 H N N ? 7 I N N ? 7 J N N ? 7 K N N ? 7 L N N ? 7 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 798 A CYS 798 1_555 A SG CYS 804 A CYS 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc1 D N01 A1H1Z . A A1H1Z 903 1_555 G FE FE . A FE 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc2 D N03 A1H1Z . A A1H1Z 903 1_555 G FE FE . A FE 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc3 D N05 A1H1Z . A A1H1Z 903 1_555 G FE FE . A FE 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.621 ? metalc ? metalc4 D O03 A1H1Z . A A1H1Z 903 1_555 G FE FE . A FE 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc5 D O05 A1H1Z . A A1H1Z 903 1_555 G FE FE . A FE 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.704 ? metalc ? metalc6 D O08 A1H1Z . A A1H1Z 903 1_555 G FE FE . A FE 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.702 ? metalc ? metalc7 D O09 A1H1Z . A A1H1Z 903 1_555 G FE FE . A FE 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.762 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 510 n n S O2 SO4 doub 511 n n S O3 SO4 sing 512 n n S O4 SO4 sing 513 n n # _atom_sites.entry_id 8RMI _atom_sites.fract_transf_matrix[1][1] 0.010693 _atom_sites.fract_transf_matrix[1][2] 0.006174 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012348 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005624 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BOG A 1 901 904 BOG BOG . C 2 BOG A 1 902 905 BOG BOG . D 3 A1H1Z A 1 903 901 A1H1Z LIG . E 4 GOL A 1 904 902 GOL GOL . F 5 NH4 A 1 905 903 NH4 NH4 . G 6 FE A 1 906 1 FE FE . H 7 SO4 A 1 907 1 SO4 SO4 . I 7 SO4 A 1 908 2 SO4 SO4 . J 7 SO4 A 1 909 3 SO4 SO4 . K 7 SO4 A 1 910 4 SO4 SO4 . L 7 SO4 A 1 911 5 SO4 SO4 . M 7 SO4 A 1 912 6 SO4 SO4 . N 8 NA A 1 913 1 NA NA . O 9 HOH A 1 1001 20 HOH HOH . O 9 HOH A 2 1002 7 HOH HOH . O 9 HOH A 3 1003 8 HOH HOH . O 9 HOH A 4 1004 19 HOH HOH . O 9 HOH A 5 1005 39 HOH HOH . O 9 HOH A 6 1006 10 HOH HOH . O 9 HOH A 7 1007 17 HOH HOH . O 9 HOH A 8 1008 34 HOH HOH . O 9 HOH A 9 1009 24 HOH HOH . O 9 HOH A 10 1010 16 HOH HOH . O 9 HOH A 11 1011 35 HOH HOH . O 9 HOH A 12 1012 30 HOH HOH . O 9 HOH A 13 1013 2 HOH HOH . O 9 HOH A 14 1014 25 HOH HOH . O 9 HOH A 15 1015 4 HOH HOH . O 9 HOH A 16 1016 31 HOH HOH . O 9 HOH A 17 1017 14 HOH HOH . O 9 HOH A 18 1018 22 HOH HOH . O 9 HOH A 19 1019 11 HOH HOH . O 9 HOH A 20 1020 18 HOH HOH . O 9 HOH A 21 1021 5 HOH HOH . O 9 HOH A 22 1022 29 HOH HOH . O 9 HOH A 23 1023 32 HOH HOH . O 9 HOH A 24 1024 37 HOH HOH . O 9 HOH A 25 1025 15 HOH HOH . O 9 HOH A 26 1026 28 HOH HOH . O 9 HOH A 27 1027 3 HOH HOH . O 9 HOH A 28 1028 27 HOH HOH . O 9 HOH A 29 1029 26 HOH HOH . O 9 HOH A 30 1030 13 HOH HOH . O 9 HOH A 31 1031 23 HOH HOH . O 9 HOH A 32 1032 33 HOH HOH . O 9 HOH A 33 1033 12 HOH HOH . O 9 HOH A 34 1034 38 HOH HOH . O 9 HOH A 35 1035 40 HOH HOH . O 9 HOH A 36 1036 6 HOH HOH . O 9 HOH A 37 1037 9 HOH HOH . O 9 HOH A 38 1038 21 HOH HOH . O 9 HOH A 39 1039 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . J 7 -8.532 -47.78 3.516 1 134.08 ? S SO4 909 A 1 HETATM 2 O O1 SO4 . . . J 7 -8.594 -46.355 3.287 1 94.06 ? O1 SO4 909 A 1 HETATM 3 O O2 SO4 . . . J 7 -9.082 -48.478 2.377 1 151.29 ? O2 SO4 909 A 1 HETATM 4 O O3 SO4 . . . J 7 -9.287 -48.101 4.711 1 123.23 ? O3 SO4 909 A 1 HETATM 5 O O4 SO4 . . . J 7 -7.162 -48.191 3.682 1 112.8 ? O4 SO4 909 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #