data_8ROI
#
_model_server_result.job_id            v9eKn-ZFpXXaXwzSvnkrtw 
_model_server_result.datetime_utc      '2024-11-22 21:55:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8roi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":2001}' 
#
_entry.id    8ROI 
#
_exptl.entry_id    8ROI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              427.201 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-DIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8ROI 
_cell.length_a            89.949 
_cell.length_b            89.949 
_cell.length_c            233.913 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8ROI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    'P 4abw 2nw' 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H15 N5 O10 P2' 
_chem_comp.formula_weight    427.201 
_chem_comp.id                ADP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "ADENOSINE-5'-DIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PB O1B ADP doub 1 n n 
PB O2B ADP sing 2 n n 
PB O3B ADP sing 3 n n 
PB O3A ADP sing 4 n n 
O2B HOB2 ADP sing 5 n n 
O3B HOB3 ADP sing 6 n n 
PA O1A ADP doub 7 n n 
PA O2A ADP sing 8 n n 
PA O3A ADP sing 9 n n 
PA O5' ADP sing 10 n n 
O2A HOA2 ADP sing 11 n n 
O5' C5' ADP sing 12 n n 
C5' C4' ADP sing 13 n n 
C5' "H5'1" ADP sing 14 n n 
C5' "H5'2" ADP sing 15 n n 
C4' O4' ADP sing 16 n n 
C4' C3' ADP sing 17 n n 
C4' H4' ADP sing 18 n n 
O4' C1' ADP sing 19 n n 
C3' O3' ADP sing 20 n n 
C3' C2' ADP sing 21 n n 
C3' H3' ADP sing 22 n n 
O3' HO3' ADP sing 23 n n 
C2' O2' ADP sing 24 n n 
C2' C1' ADP sing 25 n n 
C2' H2' ADP sing 26 n n 
O2' HO2' ADP sing 27 n n 
C1' N9 ADP sing 28 n n 
C1' H1' ADP sing 29 n n 
N9 C8 ADP sing 30 n y 
N9 C4 ADP sing 31 n y 
C8 N7 ADP doub 32 n y 
C8 H8 ADP sing 33 n n 
N7 C5 ADP sing 34 n y 
C5 C6 ADP sing 35 n y 
C5 C4 ADP doub 36 n y 
C6 N6 ADP sing 37 n n 
C6 N1 ADP doub 38 n y 
N6 HN61 ADP sing 39 n n 
N6 HN62 ADP sing 40 n n 
N1 C2 ADP sing 41 n y 
C2 N3 ADP doub 42 n y 
C2 H2 ADP sing 43 n n 
N3 C4 ADP sing 44 n y 
#
_atom_sites.entry_id                     8ROI 
_atom_sites.fract_transf_matrix[1][1]    0.011117 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011117 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004275 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ADP A 1 2001 2001 ADP ADP . 
D 4 HOH A 1 2101 10 HOH HOH . 
D 4 HOH A 2 2102 58 HOH HOH . 
D 4 HOH A 3 2103 74 HOH HOH . 
D 4 HOH A 4 2104 27 HOH HOH . 
D 4 HOH A 5 2105 53 HOH HOH . 
D 4 HOH A 6 2106 128 HOH HOH . 
D 4 HOH A 7 2107 50 HOH HOH . 
D 4 HOH A 8 2108 1 HOH HOH . 
D 4 HOH A 9 2109 26 HOH HOH . 
D 4 HOH A 10 2110 112 HOH HOH . 
D 4 HOH A 11 2111 51 HOH HOH . 
D 4 HOH A 12 2112 75 HOH HOH . 
D 4 HOH A 13 2113 57 HOH HOH . 
D 4 HOH A 14 2114 48 HOH HOH . 
D 4 HOH A 15 2115 62 HOH HOH . 
D 4 HOH A 16 2116 18 HOH HOH . 
D 4 HOH A 17 2117 6 HOH HOH . 
D 4 HOH A 18 2118 59 HOH HOH . 
D 4 HOH A 19 2119 54 HOH HOH . 
D 4 HOH A 20 2120 99 HOH HOH . 
D 4 HOH A 21 2121 7 HOH HOH . 
D 4 HOH A 22 2122 55 HOH HOH . 
D 4 HOH A 23 2123 17 HOH HOH . 
D 4 HOH A 24 2124 43 HOH HOH . 
D 4 HOH A 25 2125 46 HOH HOH . 
D 4 HOH A 26 2126 67 HOH HOH . 
D 4 HOH A 27 2127 116 HOH HOH . 
D 4 HOH A 28 2128 100 HOH HOH . 
D 4 HOH A 29 2129 12 HOH HOH . 
D 4 HOH A 30 2130 19 HOH HOH . 
D 4 HOH A 31 2131 83 HOH HOH . 
D 4 HOH A 32 2132 5 HOH HOH . 
D 4 HOH A 33 2133 4 HOH HOH . 
D 4 HOH A 34 2134 13 HOH HOH . 
D 4 HOH A 35 2135 56 HOH HOH . 
D 4 HOH A 36 2136 38 HOH HOH . 
D 4 HOH A 37 2137 104 HOH HOH . 
D 4 HOH A 38 2138 93 HOH HOH . 
D 4 HOH A 39 2139 103 HOH HOH . 
D 4 HOH A 40 2140 40 HOH HOH . 
D 4 HOH A 41 2141 36 HOH HOH . 
D 4 HOH A 42 2142 80 HOH HOH . 
D 4 HOH A 43 2143 52 HOH HOH . 
D 4 HOH A 44 2144 15 HOH HOH . 
D 4 HOH A 45 2145 8 HOH HOH . 
D 4 HOH A 46 2146 16 HOH HOH . 
D 4 HOH A 47 2147 78 HOH HOH . 
D 4 HOH A 48 2148 97 HOH HOH . 
D 4 HOH A 49 2149 31 HOH HOH . 
D 4 HOH A 50 2150 108 HOH HOH . 
D 4 HOH A 51 2151 120 HOH HOH . 
D 4 HOH A 52 2152 42 HOH HOH . 
D 4 HOH A 53 2153 111 HOH HOH . 
D 4 HOH A 54 2154 87 HOH HOH . 
D 4 HOH A 55 2155 117 HOH HOH . 
D 4 HOH A 56 2156 28 HOH HOH . 
D 4 HOH A 57 2157 39 HOH HOH . 
D 4 HOH A 58 2158 106 HOH HOH . 
D 4 HOH A 59 2159 20 HOH HOH . 
D 4 HOH A 60 2160 22 HOH HOH . 
D 4 HOH A 61 2161 11 HOH HOH . 
D 4 HOH A 62 2162 24 HOH HOH . 
D 4 HOH A 63 2163 101 HOH HOH . 
D 4 HOH A 64 2164 85 HOH HOH . 
D 4 HOH A 65 2165 127 HOH HOH . 
D 4 HOH A 66 2166 98 HOH HOH . 
D 4 HOH A 67 2167 89 HOH HOH . 
D 4 HOH A 68 2168 37 HOH HOH . 
D 4 HOH A 69 2169 81 HOH HOH . 
D 4 HOH A 70 2170 33 HOH HOH . 
D 4 HOH A 71 2171 2 HOH HOH . 
D 4 HOH A 72 2172 107 HOH HOH . 
D 4 HOH A 73 2173 30 HOH HOH . 
D 4 HOH A 74 2174 109 HOH HOH . 
D 4 HOH A 75 2175 76 HOH HOH . 
D 4 HOH A 76 2176 71 HOH HOH . 
D 4 HOH A 77 2177 41 HOH HOH . 
D 4 HOH A 78 2178 119 HOH HOH . 
D 4 HOH A 79 2179 63 HOH HOH . 
D 4 HOH A 80 2180 44 HOH HOH . 
D 4 HOH A 81 2181 77 HOH HOH . 
D 4 HOH A 82 2182 122 HOH HOH . 
D 4 HOH A 83 2183 70 HOH HOH . 
D 4 HOH A 84 2184 82 HOH HOH . 
D 4 HOH A 85 2185 110 HOH HOH . 
D 4 HOH A 86 2186 66 HOH HOH . 
D 4 HOH A 87 2187 35 HOH HOH . 
D 4 HOH A 88 2188 84 HOH HOH . 
D 4 HOH A 89 2189 114 HOH HOH . 
D 4 HOH A 90 2190 29 HOH HOH . 
D 4 HOH A 91 2191 49 HOH HOH . 
D 4 HOH A 92 2192 113 HOH HOH . 
D 4 HOH A 93 2193 124 HOH HOH . 
D 4 HOH A 94 2194 25 HOH HOH . 
D 4 HOH A 95 2195 118 HOH HOH . 
D 4 HOH A 96 2196 126 HOH HOH . 
D 4 HOH A 97 2197 125 HOH HOH . 
D 4 HOH A 98 2198 115 HOH HOH . 
D 4 HOH A 99 2199 123 HOH HOH . 
D 4 HOH A 100 2200 121 HOH HOH . 
D 4 HOH A 101 2201 45 HOH HOH . 
D 4 HOH A 102 2202 69 HOH HOH . 
E 4 HOH B 1 201 47 HOH HOH . 
E 4 HOH B 2 202 60 HOH HOH . 
E 4 HOH B 3 203 21 HOH HOH . 
E 4 HOH B 4 204 23 HOH HOH . 
E 4 HOH B 5 205 92 HOH HOH . 
E 4 HOH B 6 206 94 HOH HOH . 
E 4 HOH B 7 207 95 HOH HOH . 
E 4 HOH B 8 208 105 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PB ADP . . . C 3 -44.647 -19.889 -42.13 1 58.77 ? PB ADP 2001 A 1 
HETATM 2 O O1B ADP . . . C 3 -44.557 -19.085 -43.386 1 68.81 ? O1B ADP 2001 A 1 
HETATM 3 O O2B ADP . . . C 3 -43.862 -21.16 -42.233 1 61.89 -1 O2B ADP 2001 A 1 
HETATM 4 O O3B ADP . . . C 3 -44.239 -18.993 -40.996 1 55.85 -1 O3B ADP 2001 A 1 
HETATM 5 P PA ADP . . . C 3 -46.885 -20.562 -40.426 1 56.3 ? PA ADP 2001 A 1 
HETATM 6 O O1A ADP . . . C 3 -45.999 -21.026 -39.318 1 49.65 -1 O1A ADP 2001 A 1 
HETATM 7 O O2A ADP . . . C 3 -47.454 -19.213 -40.136 1 48.39 -1 O2A ADP 2001 A 1 
HETATM 8 O O3A ADP . . . C 3 -46.154 -20.435 -41.887 1 56.16 ? O3A ADP 2001 A 1 
HETATM 9 O O5' ADP . . . C 3 -47.943 -21.769 -40.619 1 54.76 ? O5' ADP 2001 A 1 
HETATM 10 C C5' ADP . . . C 3 -48.948 -21.426 -41.456 1 51.99 ? C5' ADP 2001 A 1 
HETATM 11 C C4' ADP . . . C 3 -49.672 -22.574 -41.748 1 63.31 ? C4' ADP 2001 A 1 
HETATM 12 O O4' ADP . . . C 3 -50.221 -23.27 -40.52 1 59.41 ? O4' ADP 2001 A 1 
HETATM 13 C C3' ADP . . . C 3 -50.924 -21.976 -42.471 1 61.81 ? C3' ADP 2001 A 1 
HETATM 14 O O3' ADP . . . C 3 -51.322 -23.085 -43.402 1 52.25 ? O3' ADP 2001 A 1 
HETATM 15 C C2' ADP . . . C 3 -51.692 -21.752 -41.511 1 63.23 ? C2' ADP 2001 A 1 
HETATM 16 O O2' ADP . . . C 3 -53.102 -21.539 -41.894 1 65.35 ? O2' ADP 2001 A 1 
HETATM 17 C C1' ADP . . . C 3 -51.508 -23.087 -40.569 1 65.08 ? C1' ADP 2001 A 1 
HETATM 18 N N9 ADP . . . C 3 -52.151 -22.896 -39.273 1 52.68 ? N9 ADP 2001 A 1 
HETATM 19 C C8 ADP . . . C 3 -52.169 -21.785 -38.555 1 48.6 ? C8 ADP 2001 A 1 
HETATM 20 N N7 ADP . . . C 3 -52.856 -21.98 -37.43 1 48.05 ? N7 ADP 2001 A 1 
HETATM 21 C C5 ADP . . . C 3 -53.307 -23.246 -37.41 1 49.7 ? C5 ADP 2001 A 1 
HETATM 22 C C6 ADP . . . C 3 -54.077 -24.031 -36.521 1 52.92 ? C6 ADP 2001 A 1 
HETATM 23 N N6 ADP . . . C 3 -54.574 -23.474 -35.265 1 44.13 ? N6 ADP 2001 A 1 
HETATM 24 N N1 ADP . . . C 3 -54.345 -25.299 -36.837 1 56.85 ? N1 ADP 2001 A 1 
HETATM 25 C C2 ADP . . . C 3 -53.898 -25.832 -37.985 1 52.69 ? C2 ADP 2001 A 1 
HETATM 26 N N3 ADP . . . C 3 -53.174 -25.112 -38.849 1 52.06 ? N3 ADP 2001 A 1 
HETATM 27 C C4 ADP . . . C 3 -52.86 -23.825 -38.595 1 52.8 ? C4 ADP 2001 A 1 
#
_model_server_stats.io_time_ms              112 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           27 
#