data_8RQR # _model_server_result.job_id SuUBto1_sBjHzn4j7r4iFw _model_server_result.datetime_utc '2024-11-08 08:55:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8rqr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":611}' # _entry.id 8RQR # _exptl.entry_id 8RQR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8RQR _cell.length_a 48.679 _cell.length_b 76.461 _cell.length_c 157.08 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RQR _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab (y,z,x)' _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 190 n n C1 C2 GOL sing 191 n n C1 H11 GOL sing 192 n n C1 H12 GOL sing 193 n n O1 HO1 GOL sing 194 n n C2 O2 GOL sing 195 n n C2 C3 GOL sing 196 n n C2 H2 GOL sing 197 n n O2 HO2 GOL sing 198 n n C3 O3 GOL sing 199 n n C3 H31 GOL sing 200 n n C3 H32 GOL sing 201 n n O3 HO3 GOL sing 202 n n # _atom_sites.entry_id 8RQR _atom_sites.fract_transf_matrix[1][1] 0.020543 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013079 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006366 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1H2K A 1 601 1 A1H2K 7TN . C 2 A1H2K A 1 602 2 A1H2K 7TN . D 2 A1H2K A 1 603 3 A1H2K 7TN . E 2 A1H2K A 1 604 4 A1H2K 7TN . F 2 A1H2K A 1 605 5 A1H2K 7TN . G 2 A1H2K A 1 606 6 A1H2K 7TN . H 2 A1H2K A 1 607 7 A1H2K 7TN . I 2 A1H2K A 1 608 8 A1H2K 7TN . J 3 GOL A 1 609 10 GOL GOL . K 3 GOL A 1 610 11 GOL GOL . L 3 GOL A 1 611 12 GOL GOL . M 3 GOL A 1 612 13 GOL GOL . N 4 HOH A 1 701 35 HOH HOH . N 4 HOH A 2 702 13 HOH HOH . N 4 HOH A 3 703 81 HOH HOH . N 4 HOH A 4 704 130 HOH HOH . N 4 HOH A 5 705 31 HOH HOH . N 4 HOH A 6 706 75 HOH HOH . N 4 HOH A 7 707 106 HOH HOH . N 4 HOH A 8 708 121 HOH HOH . N 4 HOH A 9 709 18 HOH HOH . N 4 HOH A 10 710 3 HOH HOH . N 4 HOH A 11 711 17 HOH HOH . N 4 HOH A 12 712 129 HOH HOH . N 4 HOH A 13 713 24 HOH HOH . N 4 HOH A 14 714 98 HOH HOH . N 4 HOH A 15 715 5 HOH HOH . N 4 HOH A 16 716 21 HOH HOH . N 4 HOH A 17 717 12 HOH HOH . N 4 HOH A 18 718 73 HOH HOH . N 4 HOH A 19 719 60 HOH HOH . N 4 HOH A 20 720 102 HOH HOH . N 4 HOH A 21 721 29 HOH HOH . N 4 HOH A 22 722 23 HOH HOH . N 4 HOH A 23 723 40 HOH HOH . N 4 HOH A 24 724 126 HOH HOH . N 4 HOH A 25 725 1 HOH HOH . N 4 HOH A 26 726 22 HOH HOH . N 4 HOH A 27 727 30 HOH HOH . N 4 HOH A 28 728 10 HOH HOH . N 4 HOH A 29 729 62 HOH HOH . N 4 HOH A 30 730 55 HOH HOH . N 4 HOH A 31 731 53 HOH HOH . N 4 HOH A 32 732 32 HOH HOH . N 4 HOH A 33 733 9 HOH HOH . N 4 HOH A 34 734 117 HOH HOH . N 4 HOH A 35 735 119 HOH HOH . N 4 HOH A 36 736 34 HOH HOH . N 4 HOH A 37 737 16 HOH HOH . N 4 HOH A 38 738 67 HOH HOH . N 4 HOH A 39 739 68 HOH HOH . N 4 HOH A 40 740 7 HOH HOH . N 4 HOH A 41 741 41 HOH HOH . N 4 HOH A 42 742 54 HOH HOH . N 4 HOH A 43 743 25 HOH HOH . N 4 HOH A 44 744 28 HOH HOH . N 4 HOH A 45 745 38 HOH HOH . N 4 HOH A 46 746 45 HOH HOH . N 4 HOH A 47 747 51 HOH HOH . N 4 HOH A 48 748 19 HOH HOH . N 4 HOH A 49 749 39 HOH HOH . N 4 HOH A 50 750 2 HOH HOH . N 4 HOH A 51 751 87 HOH HOH . N 4 HOH A 52 752 109 HOH HOH . N 4 HOH A 53 753 36 HOH HOH . N 4 HOH A 54 754 107 HOH HOH . N 4 HOH A 55 755 8 HOH HOH . N 4 HOH A 56 756 94 HOH HOH . N 4 HOH A 57 757 128 HOH HOH . N 4 HOH A 58 758 26 HOH HOH . N 4 HOH A 59 759 14 HOH HOH . N 4 HOH A 60 760 27 HOH HOH . N 4 HOH A 61 761 37 HOH HOH . N 4 HOH A 62 762 65 HOH HOH . N 4 HOH A 63 763 46 HOH HOH . N 4 HOH A 64 764 4 HOH HOH . N 4 HOH A 65 765 123 HOH HOH . N 4 HOH A 66 766 78 HOH HOH . N 4 HOH A 67 767 20 HOH HOH . N 4 HOH A 68 768 89 HOH HOH . N 4 HOH A 69 769 6 HOH HOH . N 4 HOH A 70 770 64 HOH HOH . N 4 HOH A 71 771 66 HOH HOH . N 4 HOH A 72 772 77 HOH HOH . N 4 HOH A 73 773 92 HOH HOH . N 4 HOH A 74 774 63 HOH HOH . N 4 HOH A 75 775 42 HOH HOH . N 4 HOH A 76 776 58 HOH HOH . N 4 HOH A 77 777 15 HOH HOH . N 4 HOH A 78 778 11 HOH HOH . N 4 HOH A 79 779 49 HOH HOH . N 4 HOH A 80 780 44 HOH HOH . N 4 HOH A 81 781 33 HOH HOH . N 4 HOH A 82 782 83 HOH HOH . N 4 HOH A 83 783 82 HOH HOH . N 4 HOH A 84 784 76 HOH HOH . N 4 HOH A 85 785 47 HOH HOH . N 4 HOH A 86 786 105 HOH HOH . N 4 HOH A 87 787 131 HOH HOH . N 4 HOH A 88 788 69 HOH HOH . N 4 HOH A 89 789 113 HOH HOH . N 4 HOH A 90 790 97 HOH HOH . N 4 HOH A 91 791 61 HOH HOH . N 4 HOH A 92 792 74 HOH HOH . N 4 HOH A 93 793 112 HOH HOH . N 4 HOH A 94 794 99 HOH HOH . N 4 HOH A 95 795 57 HOH HOH . N 4 HOH A 96 796 43 HOH HOH . N 4 HOH A 97 797 125 HOH HOH . N 4 HOH A 98 798 56 HOH HOH . N 4 HOH A 99 799 124 HOH HOH . N 4 HOH A 100 800 114 HOH HOH . N 4 HOH A 101 801 111 HOH HOH . N 4 HOH A 102 802 118 HOH HOH . N 4 HOH A 103 803 120 HOH HOH . N 4 HOH A 104 804 104 HOH HOH . N 4 HOH A 105 805 85 HOH HOH . N 4 HOH A 106 806 116 HOH HOH . N 4 HOH A 107 807 50 HOH HOH . N 4 HOH A 108 808 84 HOH HOH . N 4 HOH A 109 809 95 HOH HOH . N 4 HOH A 110 810 110 HOH HOH . N 4 HOH A 111 811 100 HOH HOH . N 4 HOH A 112 812 59 HOH HOH . N 4 HOH A 113 813 93 HOH HOH . N 4 HOH A 114 814 103 HOH HOH . N 4 HOH A 115 815 88 HOH HOH . N 4 HOH A 116 816 127 HOH HOH . N 4 HOH A 117 817 101 HOH HOH . N 4 HOH A 118 818 80 HOH HOH . N 4 HOH A 119 819 79 HOH HOH . N 4 HOH A 120 820 96 HOH HOH . N 4 HOH A 121 821 90 HOH HOH . N 4 HOH A 122 822 132 HOH HOH . N 4 HOH A 123 823 122 HOH HOH . N 4 HOH A 124 824 108 HOH HOH . N 4 HOH A 125 825 91 HOH HOH . N 4 HOH A 126 826 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . L 3 30.935 11.425 20.529 1 58.94 ? C1 GOL 611 A 1 HETATM 2 O O1 GOL . . . L 3 31.24 11.034 21.833 1 62.3 ? O1 GOL 611 A 1 HETATM 3 C C2 GOL . . . L 3 29.863 12.541 20.636 1 65.11 ? C2 GOL 611 A 1 HETATM 4 O O2 GOL . . . L 3 28.67 12.06 21.17 1 56.61 ? O2 GOL 611 A 1 HETATM 5 C C3 GOL . . . L 3 30.508 13.65 21.515 1 71.48 ? C3 GOL 611 A 1 HETATM 6 O O3 GOL . . . L 3 29.807 13.679 22.725 1 63.4 ? O3 GOL 611 A 1 HETATM 7 H H11 GOL . . . L 3 30.588 10.696 19.992 1 70.74 ? H11 GOL 611 A 1 HETATM 8 H H12 GOL . . . L 3 31.706 11.765 20.05 1 70.74 ? H12 GOL 611 A 1 HETATM 9 H HO1 GOL . . . L 3 30.543 11.174 22.298 1 74.77 ? HO1 GOL 611 A 1 HETATM 10 H H2 GOL . . . L 3 29.645 12.889 19.757 1 78.15 ? H2 GOL 611 A 1 HETATM 11 H HO2 GOL . . . L 3 28.547 11.274 20.869 1 67.94 ? HO2 GOL 611 A 1 HETATM 12 H H31 GOL . . . L 3 30.475 14.491 21.032 1 85.79 ? H31 GOL 611 A 1 HETATM 13 H H32 GOL . . . L 3 31.452 13.454 21.624 1 85.79 ? H32 GOL 611 A 1 HETATM 14 H HO3 GOL . . . L 3 28.988 13.579 22.529 1 76.1 ? HO3 GOL 611 A 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #