data_8RRB # _model_server_result.job_id 67lZ7nMct_dFJGHjNtZkfw _model_server_result.datetime_utc '2025-02-26 13:09:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8rrb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 8RRB # _exptl.entry_id 8RRB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 414.488 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NONAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8RRB _cell.length_a 36.49 _cell.length_b 56.9 _cell.length_c 61.07 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RRB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H38 O10' _chem_comp.formula_weight 414.488 _chem_comp.id 2PE _chem_comp.mon_nstd_flag . _chem_comp.name 'NONAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 2PE sing 1 n n O1 HO1 2PE sing 2 n n C2 C3 2PE sing 3 n n C2 H21 2PE sing 4 n n C2 H22 2PE sing 5 n n C3 O4 2PE sing 6 n n C3 H31 2PE sing 7 n n C3 H32 2PE sing 8 n n O4 C5 2PE sing 9 n n C5 C6 2PE sing 10 n n C5 H51 2PE sing 11 n n C5 H52 2PE sing 12 n n C6 O7 2PE sing 13 n n C6 H61 2PE sing 14 n n C6 H62 2PE sing 15 n n O7 C8 2PE sing 16 n n C8 C9 2PE sing 17 n n C8 H81 2PE sing 18 n n C8 H82 2PE sing 19 n n C9 O10 2PE sing 20 n n C9 H91 2PE sing 21 n n C9 H92 2PE sing 22 n n O10 C11 2PE sing 23 n n C11 C12 2PE sing 24 n n C11 H111 2PE sing 25 n n C11 H112 2PE sing 26 n n C12 O13 2PE sing 27 n n C12 H121 2PE sing 28 n n C12 H122 2PE sing 29 n n O13 C14 2PE sing 30 n n C14 C15 2PE sing 31 n n C14 H141 2PE sing 32 n n C14 H142 2PE sing 33 n n C15 O16 2PE sing 34 n n C15 H151 2PE sing 35 n n C15 H152 2PE sing 36 n n O16 C17 2PE sing 37 n n C17 C18 2PE sing 38 n n C17 H171 2PE sing 39 n n C17 H172 2PE sing 40 n n C18 O19 2PE sing 41 n n C18 H181 2PE sing 42 n n C18 H182 2PE sing 43 n n O19 C20 2PE sing 44 n n C20 C21 2PE sing 45 n n C20 H201 2PE sing 46 n n C20 H202 2PE sing 47 n n C21 O22 2PE sing 48 n n C21 H211 2PE sing 49 n n C21 H212 2PE sing 50 n n O22 C23 2PE sing 51 n n C23 C24 2PE sing 52 n n C23 H231 2PE sing 53 n n C23 H232 2PE sing 54 n n C24 O25 2PE sing 55 n n C24 H241 2PE sing 56 n n C24 H242 2PE sing 57 n n O25 C26 2PE sing 58 n n C26 C27 2PE sing 59 n n C26 H261 2PE sing 60 n n C26 H262 2PE sing 61 n n C27 O28 2PE sing 62 n n C27 H271 2PE sing 63 n n C27 H272 2PE sing 64 n n O28 HO2 2PE sing 65 n n # _atom_sites.entry_id 8RRB _atom_sites.fract_transf_matrix[1][1] 0.027405 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017575 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016375 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1H2P A 1 301 1 A1H2P LIG . C 3 2PE A 1 302 2 2PE 2PE . D 4 SCN A 1 303 2 SCN SCN . E 4 SCN A 1 304 3 SCN SCN . F 5 HOH A 1 401 120 HOH HOH . F 5 HOH A 2 402 136 HOH HOH . F 5 HOH A 3 403 122 HOH HOH . F 5 HOH A 4 404 141 HOH HOH . F 5 HOH A 5 405 44 HOH HOH . F 5 HOH A 6 406 16 HOH HOH . F 5 HOH A 7 407 142 HOH HOH . F 5 HOH A 8 408 160 HOH HOH . F 5 HOH A 9 409 149 HOH HOH . F 5 HOH A 10 410 23 HOH HOH . F 5 HOH A 11 411 12 HOH HOH . F 5 HOH A 12 412 84 HOH HOH . F 5 HOH A 13 413 119 HOH HOH . F 5 HOH A 14 414 13 HOH HOH . F 5 HOH A 15 415 26 HOH HOH . F 5 HOH A 16 416 75 HOH HOH . F 5 HOH A 17 417 200 HOH HOH . F 5 HOH A 18 418 20 HOH HOH . F 5 HOH A 19 419 42 HOH HOH . F 5 HOH A 20 420 15 HOH HOH . F 5 HOH A 21 421 8 HOH HOH . F 5 HOH A 22 422 103 HOH HOH . F 5 HOH A 23 423 80 HOH HOH . F 5 HOH A 24 424 184 HOH HOH . F 5 HOH A 25 425 38 HOH HOH . F 5 HOH A 26 426 97 HOH HOH . F 5 HOH A 27 427 192 HOH HOH . F 5 HOH A 28 428 140 HOH HOH . F 5 HOH A 29 429 11 HOH HOH . F 5 HOH A 30 430 58 HOH HOH . F 5 HOH A 31 431 164 HOH HOH . F 5 HOH A 32 432 59 HOH HOH . F 5 HOH A 33 433 22 HOH HOH . F 5 HOH A 34 434 40 HOH HOH . F 5 HOH A 35 435 183 HOH HOH . F 5 HOH A 36 436 50 HOH HOH . F 5 HOH A 37 437 57 HOH HOH . F 5 HOH A 38 438 134 HOH HOH . F 5 HOH A 39 439 85 HOH HOH . F 5 HOH A 40 440 9 HOH HOH . F 5 HOH A 41 441 69 HOH HOH . F 5 HOH A 42 442 56 HOH HOH . F 5 HOH A 43 443 45 HOH HOH . F 5 HOH A 44 444 24 HOH HOH . F 5 HOH A 45 445 21 HOH HOH . F 5 HOH A 46 446 18 HOH HOH . F 5 HOH A 47 447 76 HOH HOH . F 5 HOH A 48 448 79 HOH HOH . F 5 HOH A 49 449 171 HOH HOH . F 5 HOH A 50 450 67 HOH HOH . F 5 HOH A 51 451 201 HOH HOH . F 5 HOH A 52 452 82 HOH HOH . F 5 HOH A 53 453 65 HOH HOH . F 5 HOH A 54 454 5 HOH HOH . F 5 HOH A 55 455 55 HOH HOH . F 5 HOH A 56 456 118 HOH HOH . F 5 HOH A 57 457 3 HOH HOH . F 5 HOH A 58 458 104 HOH HOH . F 5 HOH A 59 459 36 HOH HOH . F 5 HOH A 60 460 180 HOH HOH . F 5 HOH A 61 461 35 HOH HOH . F 5 HOH A 62 462 105 HOH HOH . F 5 HOH A 63 463 116 HOH HOH . F 5 HOH A 64 464 115 HOH HOH . F 5 HOH A 65 465 25 HOH HOH . F 5 HOH A 66 466 117 HOH HOH . F 5 HOH A 67 467 98 HOH HOH . F 5 HOH A 68 468 34 HOH HOH . F 5 HOH A 69 469 14 HOH HOH . F 5 HOH A 70 470 146 HOH HOH . F 5 HOH A 71 471 113 HOH HOH . F 5 HOH A 72 472 77 HOH HOH . F 5 HOH A 73 473 126 HOH HOH . F 5 HOH A 74 474 74 HOH HOH . F 5 HOH A 75 475 33 HOH HOH . F 5 HOH A 76 476 88 HOH HOH . F 5 HOH A 77 477 68 HOH HOH . F 5 HOH A 78 478 135 HOH HOH . F 5 HOH A 79 479 39 HOH HOH . F 5 HOH A 80 480 61 HOH HOH . F 5 HOH A 81 481 17 HOH HOH . F 5 HOH A 82 482 78 HOH HOH . F 5 HOH A 83 483 70 HOH HOH . F 5 HOH A 84 484 54 HOH HOH . F 5 HOH A 85 485 151 HOH HOH . F 5 HOH A 86 486 72 HOH HOH . F 5 HOH A 87 487 127 HOH HOH . F 5 HOH A 88 488 73 HOH HOH . F 5 HOH A 89 489 132 HOH HOH . F 5 HOH A 90 490 6 HOH HOH . F 5 HOH A 91 491 144 HOH HOH . F 5 HOH A 92 492 31 HOH HOH . F 5 HOH A 93 493 66 HOH HOH . F 5 HOH A 94 494 1 HOH HOH . F 5 HOH A 95 495 49 HOH HOH . F 5 HOH A 96 496 51 HOH HOH . F 5 HOH A 97 497 60 HOH HOH . F 5 HOH A 98 498 133 HOH HOH . F 5 HOH A 99 499 81 HOH HOH . F 5 HOH A 100 500 123 HOH HOH . F 5 HOH A 101 501 131 HOH HOH . F 5 HOH A 102 502 71 HOH HOH . F 5 HOH A 103 503 7 HOH HOH . F 5 HOH A 104 504 4 HOH HOH . F 5 HOH A 105 505 93 HOH HOH . F 5 HOH A 106 506 128 HOH HOH . F 5 HOH A 107 507 189 HOH HOH . F 5 HOH A 108 508 52 HOH HOH . F 5 HOH A 109 509 64 HOH HOH . F 5 HOH A 110 510 29 HOH HOH . F 5 HOH A 111 511 53 HOH HOH . F 5 HOH A 112 512 30 HOH HOH . F 5 HOH A 113 513 48 HOH HOH . F 5 HOH A 114 514 92 HOH HOH . F 5 HOH A 115 515 165 HOH HOH . F 5 HOH A 116 516 37 HOH HOH . F 5 HOH A 117 517 102 HOH HOH . F 5 HOH A 118 518 199 HOH HOH . F 5 HOH A 119 519 87 HOH HOH . F 5 HOH A 120 520 150 HOH HOH . F 5 HOH A 121 521 170 HOH HOH . F 5 HOH A 122 522 163 HOH HOH . F 5 HOH A 123 523 94 HOH HOH . F 5 HOH A 124 524 157 HOH HOH . F 5 HOH A 125 525 124 HOH HOH . F 5 HOH A 126 526 129 HOH HOH . F 5 HOH A 127 527 83 HOH HOH . F 5 HOH A 128 528 89 HOH HOH . F 5 HOH A 129 529 188 HOH HOH . F 5 HOH A 130 530 159 HOH HOH . F 5 HOH A 131 531 95 HOH HOH . F 5 HOH A 132 532 63 HOH HOH . F 5 HOH A 133 533 181 HOH HOH . F 5 HOH A 134 534 137 HOH HOH . F 5 HOH A 135 535 154 HOH HOH . F 5 HOH A 136 536 86 HOH HOH . F 5 HOH A 137 537 47 HOH HOH . F 5 HOH A 138 538 62 HOH HOH . F 5 HOH A 139 539 130 HOH HOH . F 5 HOH A 140 540 176 HOH HOH . F 5 HOH A 141 541 194 HOH HOH . F 5 HOH A 142 542 19 HOH HOH . F 5 HOH A 143 543 107 HOH HOH . F 5 HOH A 144 544 148 HOH HOH . F 5 HOH A 145 545 158 HOH HOH . F 5 HOH A 146 546 112 HOH HOH . F 5 HOH A 147 547 43 HOH HOH . F 5 HOH A 148 548 161 HOH HOH . F 5 HOH A 149 549 186 HOH HOH . F 5 HOH A 150 550 125 HOH HOH . F 5 HOH A 151 551 196 HOH HOH . F 5 HOH A 152 552 100 HOH HOH . F 5 HOH A 153 553 198 HOH HOH . F 5 HOH A 154 554 27 HOH HOH . F 5 HOH A 155 555 147 HOH HOH . F 5 HOH A 156 556 182 HOH HOH . F 5 HOH A 157 557 114 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 2PE . . . C 3 -7.79 13.28 -3.3 1 26.89 0 O1 2PE 302 A 1 HETATM 2 C C2 2PE . . . C 3 -7.064 12.299 -4.014 1 26.28 0 C2 2PE 302 A 1 HETATM 3 C C3 2PE . . . C 3 -7.809 11.007 -4.121 1 26.23 0 C3 2PE 302 A 1 HETATM 4 O O4 2PE . . . C 3 -9.085 11.234 -4.71 1 26.28 0 O4 2PE 302 A 1 HETATM 5 C C5 2PE . . . C 3 -9.874 10.054 -4.82 1 25.71 0 C5 2PE 302 A 1 HETATM 6 C C6 2PE . . . C 3 -11.154 10.215 -4.061 1 25.46 0 C6 2PE 302 A 1 HETATM 7 O O7 2PE . . . C 3 -12.133 10.869 -4.863 1 26.13 0 O7 2PE 302 A 1 HETATM 8 C C8 2PE . . . C 3 -13.453 10.368 -4.664 1 25.36 0 C8 2PE 302 A 1 HETATM 9 C C9 2PE . . . C 3 -14.249 11.292 -3.788 1 25.38 0 C9 2PE 302 A 1 HETATM 10 O O10 2PE . . . C 3 -13.56 12.524 -3.613 1 25.96 0 O10 2PE 302 A 1 HETATM 11 C C11 2PE . . . C 3 -14.404 13.574 -3.154 1 25.47 0 C11 2PE 302 A 1 HETATM 12 C C12 2PE . . . C 3 -13.594 14.818 -2.97 1 25.69 0 C12 2PE 302 A 1 HETATM 13 H HO1 2PE . . . C 3 -7.377 13.977 -3.248 0 20 0 HO1 2PE 302 A 1 HETATM 14 H H21 2PE . . . C 3 -6.211 12.139 -3.558 1 26.33 0 H21 2PE 302 A 1 HETATM 15 H H22 2PE . . . C 3 -6.873 12.635 -4.914 1 26.31 0 H22 2PE 302 A 1 HETATM 16 H H31 2PE . . . C 3 -7.922 10.615 -3.229 1 26.2 0 H31 2PE 302 A 1 HETATM 17 H H32 2PE . . . C 3 -7.299 10.375 -4.672 1 26.16 0 H32 2PE 302 A 1 HETATM 18 H H51 2PE . . . C 3 -9.376 9.286 -4.462 1 25.72 0 H51 2PE 302 A 1 HETATM 19 H H52 2PE . . . C 3 -10.072 9.877 -5.765 1 25.71 0 H52 2PE 302 A 1 HETATM 20 H H61 2PE . . . C 3 -10.992 10.737 -3.246 1 25.25 0 H61 2PE 302 A 1 HETATM 21 H H62 2PE . . . C 3 -11.484 9.332 -3.799 1 24.99 0 H62 2PE 302 A 1 HETATM 22 H H81 2PE . . . C 3 -13.412 9.481 -4.251 1 24.9 0 H81 2PE 302 A 1 HETATM 23 H H82 2PE . . . C 3 -13.901 10.277 -5.532 1 25.37 0 H82 2PE 302 A 1 HETATM 24 H H91 2PE . . . C 3 -14.396 10.871 -2.913 1 25.42 0 H91 2PE 302 A 1 HETATM 25 H H92 2PE . . . C 3 -15.124 11.459 -4.199 1 25.43 0 H92 2PE 302 A 1 HETATM 26 H H111 2PE . . . C 3 -14.819 13.319 -2.302 1 25.5 0 H111 2PE 302 A 1 HETATM 27 H H112 2PE . . . C 3 -15.117 13.738 -3.809 1 25.54 0 H112 2PE 302 A 1 HETATM 28 H H121 2PE . . . C 3 -14.2 15.585 -2.897 0 0.5 0 H121 2PE 302 A 1 HETATM 29 H H122 2PE . . . C 3 -13.035 14.969 -3.763 1 25.59 0 H122 2PE 302 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 29 #