data_8RSQ
#
_model_server_result.job_id            enFSD_aRwPlwxbv8jbYX8Q 
_model_server_result.datetime_utc      '2025-06-20 01:11:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8rsq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":510}' 
#
_entry.id    8RSQ 
#
_exptl.entry_id    8RSQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              284.436 
_entity.id                          4 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            RETINAL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     3.6.5.2 
#
_cell.angle_alpha         90 
_cell.angle_beta          124.63 
_cell.angle_gamma         90 
_cell.entry_id            8RSQ 
_cell.length_a            132.856 
_cell.length_b            39.718 
_cell.length_c            94.984 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8RSQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             K 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            NZ 
_struct_conn.ptnr1_label_comp_id            LYS 
_struct_conn.ptnr1_label_seq_id             200 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             LYS 
_struct_conn.ptnr1_auth_seq_id              200 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            K 
_struct_conn.ptnr2_label_atom_id            C15 
_struct_conn.ptnr2_label_comp_id            RET 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             RET 
_struct_conn.ptnr2_auth_seq_id              510 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.451 
_struct_conn.pdbx_value_order               sing 
#
_chem_comp.formula           'C20 H28 O' 
_chem_comp.formula_weight    284.436 
_chem_comp.id                RET 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              RETINAL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 RET sing 383 n n 
C1 C6 RET sing 384 n n 
C1 C16 RET sing 385 n n 
C1 C17 RET sing 386 n n 
C2 C3 RET sing 387 n n 
C2 H21 RET sing 388 n n 
C2 H22 RET sing 389 n n 
C3 C4 RET sing 390 n n 
C3 H31 RET sing 391 n n 
C3 H32 RET sing 392 n n 
C4 C5 RET sing 393 n n 
C4 H41 RET sing 394 n n 
C4 H42 RET sing 395 n n 
C5 C6 RET doub 396 n n 
C5 C18 RET sing 397 n n 
C6 C7 RET sing 398 n n 
C7 C8 RET doub 399 e n 
C7 H7 RET sing 400 n n 
C8 C9 RET sing 401 n n 
C8 H8 RET sing 402 n n 
C9 C10 RET doub 403 e n 
C9 C19 RET sing 404 n n 
C10 C11 RET sing 405 n n 
C10 H10 RET sing 406 n n 
C11 C12 RET doub 407 e n 
C11 H11 RET sing 408 n n 
C12 C13 RET sing 409 n n 
C12 H12 RET sing 410 n n 
C13 C14 RET doub 411 e n 
C13 C20 RET sing 412 n n 
C14 C15 RET sing 413 n n 
C14 H14 RET sing 414 n n 
C15 O1 RET doub 415 n n 
C15 H15 RET sing 416 n n 
C16 H161 RET sing 417 n n 
C16 H162 RET sing 418 n n 
C16 H163 RET sing 419 n n 
C17 H171 RET sing 420 n n 
C17 H172 RET sing 421 n n 
C17 H173 RET sing 422 n n 
C18 H181 RET sing 423 n n 
C18 H182 RET sing 424 n n 
C18 H183 RET sing 425 n n 
C19 H191 RET sing 426 n n 
C19 H192 RET sing 427 n n 
C19 H193 RET sing 428 n n 
C20 H201 RET sing 429 n n 
C20 H202 RET sing 430 n n 
C20 H203 RET sing 431 n n 
#
_atom_sites.entry_id                     8RSQ 
_atom_sites.fract_transf_matrix[1][1]    0.007527 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005198 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.025178 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012795 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GDP A 1 501 501 GDP GDP . 
C 3 LFA A 1 502 601 LFA LFA . 
D 3 LFA A 1 503 602 LFA LFA . 
E 3 LFA A 1 504 603 LFA LFA . 
F 3 LFA A 1 505 604 LFA LFA . 
G 3 LFA A 1 506 605 LFA LFA . 
H 3 LFA A 1 507 606 LFA LFA . 
I 3 LFA A 1 508 607 LFA LFA . 
J 3 LFA A 1 509 608 LFA LFA . 
K 4 RET A 1 510 200 RET LYR . 
L 5 HOH A 1 601 502 HOH HOH . 
L 5 HOH A 2 602 756 HOH HOH . 
L 5 HOH A 3 603 752 HOH HOH . 
L 5 HOH A 4 604 765 HOH HOH . 
L 5 HOH A 5 605 775 HOH HOH . 
L 5 HOH A 6 606 782 HOH HOH . 
L 5 HOH A 7 607 746 HOH HOH . 
L 5 HOH A 8 608 797 HOH HOH . 
L 5 HOH A 9 609 760 HOH HOH . 
L 5 HOH A 10 610 755 HOH HOH . 
L 5 HOH A 11 611 750 HOH HOH . 
L 5 HOH A 12 612 734 HOH HOH . 
L 5 HOH A 13 613 798 HOH HOH . 
L 5 HOH A 14 614 757 HOH HOH . 
L 5 HOH A 15 615 738 HOH HOH . 
L 5 HOH A 16 616 701 HOH HOH . 
L 5 HOH A 17 617 754 HOH HOH . 
L 5 HOH A 18 618 796 HOH HOH . 
L 5 HOH A 19 619 728 HOH HOH . 
L 5 HOH A 20 620 706 HOH HOH . 
L 5 HOH A 21 621 791 HOH HOH . 
L 5 HOH A 22 622 717 HOH HOH . 
L 5 HOH A 23 623 712 HOH HOH . 
L 5 HOH A 24 624 769 HOH HOH . 
L 5 HOH A 25 625 719 HOH HOH . 
L 5 HOH A 26 626 747 HOH HOH . 
L 5 HOH A 27 627 786 HOH HOH . 
L 5 HOH A 28 628 743 HOH HOH . 
L 5 HOH A 29 629 735 HOH HOH . 
L 5 HOH A 30 630 742 HOH HOH . 
L 5 HOH A 31 631 748 HOH HOH . 
L 5 HOH A 32 632 730 HOH HOH . 
L 5 HOH A 33 633 794 HOH HOH . 
L 5 HOH A 34 634 784 HOH HOH . 
L 5 HOH A 35 635 762 HOH HOH . 
L 5 HOH A 36 636 758 HOH HOH . 
L 5 HOH A 37 637 761 HOH HOH . 
L 5 HOH A 38 638 709 HOH HOH . 
L 5 HOH A 39 639 795 HOH HOH . 
L 5 HOH A 40 640 715 HOH HOH . 
L 5 HOH A 41 641 764 HOH HOH . 
L 5 HOH A 42 642 506 HOH HOH . 
L 5 HOH A 43 643 763 HOH HOH . 
L 5 HOH A 44 644 708 HOH HOH . 
L 5 HOH A 45 645 770 HOH HOH . 
L 5 HOH A 46 646 507 HOH HOH . 
L 5 HOH A 47 647 703 HOH HOH . 
L 5 HOH A 48 648 789 HOH HOH . 
L 5 HOH A 49 649 724 HOH HOH . 
L 5 HOH A 50 650 733 HOH HOH . 
L 5 HOH A 51 651 729 HOH HOH . 
L 5 HOH A 52 652 704 HOH HOH . 
L 5 HOH A 53 653 705 HOH HOH . 
L 5 HOH A 54 654 713 HOH HOH . 
L 5 HOH A 55 655 790 HOH HOH . 
L 5 HOH A 56 656 726 HOH HOH . 
L 5 HOH A 57 657 727 HOH HOH . 
L 5 HOH A 58 658 505 HOH HOH . 
L 5 HOH A 59 659 740 HOH HOH . 
L 5 HOH A 60 660 737 HOH HOH . 
L 5 HOH A 61 661 744 HOH HOH . 
L 5 HOH A 62 662 751 HOH HOH . 
L 5 HOH A 63 663 792 HOH HOH . 
L 5 HOH A 64 664 783 HOH HOH . 
L 5 HOH A 65 665 718 HOH HOH . 
L 5 HOH A 66 666 732 HOH HOH . 
L 5 HOH A 67 667 723 HOH HOH . 
L 5 HOH A 68 668 771 HOH HOH . 
L 5 HOH A 69 669 721 HOH HOH . 
L 5 HOH A 70 670 776 HOH HOH . 
L 5 HOH A 71 671 793 HOH HOH . 
L 5 HOH A 72 672 2 HOH HOH . 
L 5 HOH A 73 673 722 HOH HOH . 
L 5 HOH A 74 674 711 HOH HOH . 
L 5 HOH A 75 675 736 HOH HOH . 
L 5 HOH A 76 676 710 HOH HOH . 
L 5 HOH A 77 677 1 HOH HOH . 
L 5 HOH A 78 678 707 HOH HOH . 
L 5 HOH A 79 679 777 HOH HOH . 
L 5 HOH A 80 680 779 HOH HOH . 
L 5 HOH A 81 681 753 HOH HOH . 
L 5 HOH A 82 682 749 HOH HOH . 
L 5 HOH A 83 683 787 HOH HOH . 
L 5 HOH A 84 684 720 HOH HOH . 
L 5 HOH A 85 685 509 HOH HOH . 
L 5 HOH A 86 686 731 HOH HOH . 
L 5 HOH A 87 687 714 HOH HOH . 
L 5 HOH A 88 688 778 HOH HOH . 
L 5 HOH A 89 689 508 HOH HOH . 
L 5 HOH A 90 690 785 HOH HOH . 
L 5 HOH A 91 691 503 HOH HOH . 
L 5 HOH A 92 692 774 HOH HOH . 
L 5 HOH A 93 693 739 HOH HOH . 
L 5 HOH A 94 694 766 HOH HOH . 
L 5 HOH A 95 695 773 HOH HOH . 
L 5 HOH A 96 696 716 HOH HOH . 
L 5 HOH A 97 697 767 HOH HOH . 
L 5 HOH A 98 698 725 HOH HOH . 
L 5 HOH A 99 699 759 HOH HOH . 
L 5 HOH A 100 700 781 HOH HOH . 
L 5 HOH A 101 701 780 HOH HOH . 
L 5 HOH A 102 702 741 HOH HOH . 
L 5 HOH A 103 703 768 HOH HOH . 
L 5 HOH A 104 704 504 HOH HOH . 
L 5 HOH A 105 705 788 HOH HOH . 
L 5 HOH A 106 706 745 HOH HOH . 
L 5 HOH A 107 707 772 HOH HOH . 
L 5 HOH A 108 708 702 HOH HOH . 
L 5 HOH A 109 709 510 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 RET . . . K 4 12.977 -5.667 42.78 1 33.92 ? C1 RET 510 A 1 
HETATM 2 C C2 RET . . . K 4 11.84 -4.902 43.461 1 30.02 ? C2 RET 510 A 1 
HETATM 3 C C3 RET . . . K 4 10.488 -5.519 43.192 1 29.31 ? C3 RET 510 A 1 
HETATM 4 C C4 RET . . . K 4 10.2 -5.579 41.711 1 32.21 ? C4 RET 510 A 1 
HETATM 5 C C5 RET . . . K 4 11.388 -5.852 40.848 1 36.01 ? C5 RET 510 A 1 
HETATM 6 C C6 RET . . . K 4 12.661 -5.901 41.313 1 32.69 ? C6 RET 510 A 1 
HETATM 7 C C7 RET . . . K 4 13.818 -6.161 40.448 1 32.58 ? C7 RET 510 A 1 
HETATM 8 C C8 RET . . . K 4 14.542 -7.297 40.408 1 39.23 ? C8 RET 510 A 1 
HETATM 9 C C9 RET . . . K 4 15.614 -7.609 39.47 1 34.08 ? C9 RET 510 A 1 
HETATM 10 C C10 RET . . . K 4 16.826 -7.913 39.991 1 34.28 ? C10 RET 510 A 1 
HETATM 11 C C11 RET . . . K 4 17.888 -8.655 39.348 1 32.14 ? C11 RET 510 A 1 
HETATM 12 C C12 RET . . . K 4 18.965 -9.154 39.984 1 36.92 ? C12 RET 510 A 1 
HETATM 13 C C13 RET . . . K 4 20.071 -9.924 39.43 1 40.62 ? C13 RET 510 A 1 
HETATM 14 C C14 RET . . . K 4 21.237 -10.028 40.098 1 44.26 ? C14 RET 510 A 1 
HETATM 15 C C15 RET . . . K 4 22.498 -10.564 39.503 1 48.3 ? C15 RET 510 A 1 
HETATM 16 C C16 RET . . . K 4 14.239 -4.824 42.953 1 30.66 ? C16 RET 510 A 1 
HETATM 17 C C17 RET . . . K 4 13.177 -7 43.502 1 29.76 ? C17 RET 510 A 1 
HETATM 18 C C18 RET . . . K 4 11.009 -6.065 39.426 1 36.85 ? C18 RET 510 A 1 
HETATM 19 C C19 RET . . . K 4 15.184 -8.033 38.114 1 29.1 ? C19 RET 510 A 1 
HETATM 20 C C20 RET . . . K 4 19.986 -10.176 37.967 1 38.64 ? C20 RET 510 A 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           20 
#