data_8RSV # _model_server_result.job_id v4dN_PZvpLIgT4D6O_b9sw _model_server_result.datetime_utc '2025-02-18 00:15:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8rsv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 8RSV # _exptl.entry_id 8RSV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 885.04 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'Glycerol ethoxylate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.23 _cell.angle_gamma 90 _cell.entry_id 8RSV _cell.length_a 60.49 _cell.length_b 92.332 _cell.length_c 100.67 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RSV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G,I 1 1 B,D,F,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C39 H80 O21' _chem_comp.formula_weight 885.04 _chem_comp.id A1H22 _chem_comp.mon_nstd_flag . _chem_comp.name 'Glycerol ethoxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2-[2-[2-[2-[2-[2-[2,3-bis[2-[2-[2-[2-[2-(2-hydroxyethyloxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]propoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethanol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 A1H22 sing 1 n n C1 C2 A1H22 sing 2 n n C2 O2 A1H22 sing 3 n n O2 C3 A1H22 sing 4 n n C3 C4 A1H22 sing 5 n n C4 C5 A1H22 sing 6 n n C5 O5 A1H22 sing 7 n n O5 C8 A1H22 sing 8 n n C8 C9 A1H22 sing 9 n n C9 O6 A1H22 sing 10 n n C1 H2 A1H22 sing 11 n n C1 H3 A1H22 sing 12 n n C2 H5 A1H22 sing 13 n n C2 H4 A1H22 sing 14 n n C3 H7 A1H22 sing 15 n n C3 H6 A1H22 sing 16 n n C4 H8 A1H22 sing 17 n n C5 H10 A1H22 sing 18 n n C5 H9 A1H22 sing 19 n n C8 H17 A1H22 sing 20 n n C8 H16 A1H22 sing 21 n n C9 H18 A1H22 sing 22 n n C9 H19 A1H22 sing 23 n n C4 O3 A1H22 sing 24 n n O3 C6 A1H22 sing 25 n n C6 C7 A1H22 sing 26 n n C7 O4 A1H22 sing 27 n n C6 H11 A1H22 sing 28 n n C6 H12 A1H22 sing 29 n n C7 H13 A1H22 sing 30 n n C7 H14 A1H22 sing 31 n n O6 C10 A1H22 sing 32 n n C10 C11 A1H22 sing 33 n n C11 O8 A1H22 sing 34 n n C10 H20 A1H22 sing 35 n n C10 H21 A1H22 sing 36 n n C11 H22 A1H22 sing 37 n n C11 H23 A1H22 sing 38 n n O8 C12 A1H22 sing 39 n n C12 C13 A1H22 sing 40 n n C13 O7 A1H22 sing 41 n n C12 H24 A1H22 sing 42 n n C12 H25 A1H22 sing 43 n n C13 H26 A1H22 sing 44 n n C13 H27 A1H22 sing 45 n n O7 C14 A1H22 sing 46 n n C14 C15 A1H22 sing 47 n n C15 O9 A1H22 sing 48 n n C14 H28 A1H22 sing 49 n n C14 H29 A1H22 sing 50 n n C15 H30 A1H22 sing 51 n n C15 H31 A1H22 sing 52 n n O9 C16 A1H22 sing 53 n n C16 C17 A1H22 sing 54 n n C17 O10 A1H22 sing 55 n n C16 H32 A1H22 sing 56 n n C16 H33 A1H22 sing 57 n n C17 H34 A1H22 sing 58 n n C17 H35 A1H22 sing 59 n n O10 C18 A1H22 sing 60 n n C18 C19 A1H22 sing 61 n n C19 O11 A1H22 sing 62 n n C18 H36 A1H22 sing 63 n n C18 H37 A1H22 sing 64 n n C19 H38 A1H22 sing 65 n n C19 H39 A1H22 sing 66 n n O11 H40 A1H22 sing 67 n n O4 C20 A1H22 sing 68 n n C20 C21 A1H22 sing 69 n n C21 O12 A1H22 sing 70 n n C20 H15 A1H22 sing 71 n n C20 H41 A1H22 sing 72 n n C21 H42 A1H22 sing 73 n n C21 H43 A1H22 sing 74 n n O12 C22 A1H22 sing 75 n n C22 C23 A1H22 sing 76 n n C23 O13 A1H22 sing 77 n n C22 H44 A1H22 sing 78 n n C22 H45 A1H22 sing 79 n n C23 H46 A1H22 sing 80 n n C23 H47 A1H22 sing 81 n n O13 C24 A1H22 sing 82 n n C24 C25 A1H22 sing 83 n n C25 O14 A1H22 sing 84 n n O14 C26 A1H22 sing 85 n n C26 C27 A1H22 sing 86 n n C27 O15 A1H22 sing 87 n n C24 H48 A1H22 sing 88 n n C24 H49 A1H22 sing 89 n n C25 H50 A1H22 sing 90 n n C25 H51 A1H22 sing 91 n n C26 H52 A1H22 sing 92 n n C26 H53 A1H22 sing 93 n n C27 H54 A1H22 sing 94 n n C27 H55 A1H22 sing 95 n n O15 C28 A1H22 sing 96 n n C28 C29 A1H22 sing 97 n n C29 O16 A1H22 sing 98 n n C28 H56 A1H22 sing 99 n n C28 H57 A1H22 sing 100 n n C29 H58 A1H22 sing 101 n n C29 H59 A1H22 sing 102 n n O16 H60 A1H22 sing 103 n n O1 C30 A1H22 sing 104 n n C30 C31 A1H22 sing 105 n n C31 O17 A1H22 sing 106 n n O17 C32 A1H22 sing 107 n n C32 C33 A1H22 sing 108 n n C33 O18 A1H22 sing 109 n n O18 C34 A1H22 sing 110 n n C34 C35 A1H22 sing 111 n n C35 O19 A1H22 sing 112 n n O19 C36 A1H22 sing 113 n n C36 C37 A1H22 sing 114 n n C37 O20 A1H22 sing 115 n n C30 H1 A1H22 sing 116 n n C30 H61 A1H22 sing 117 n n C31 H62 A1H22 sing 118 n n C31 H63 A1H22 sing 119 n n C32 H64 A1H22 sing 120 n n C32 H65 A1H22 sing 121 n n C33 H66 A1H22 sing 122 n n C33 H67 A1H22 sing 123 n n C34 H68 A1H22 sing 124 n n C34 H69 A1H22 sing 125 n n C35 H70 A1H22 sing 126 n n C35 H71 A1H22 sing 127 n n C36 H72 A1H22 sing 128 n n C36 H73 A1H22 sing 129 n n C37 H74 A1H22 sing 130 n n C37 H75 A1H22 sing 131 n n O20 C38 A1H22 sing 132 n n C38 C39 A1H22 sing 133 n n C39 O21 A1H22 sing 134 n n C38 H76 A1H22 sing 135 n n C38 H77 A1H22 sing 136 n n C39 H78 A1H22 sing 137 n n C39 H79 A1H22 sing 138 n n O21 H80 A1H22 sing 139 n n # _atom_sites.entry_id 8RSV _atom_sites.fract_transf_matrix[1][1] 0.016532 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004812 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01083 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010346 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 A1H22 A 1 401 403 A1H22 UNL . F 3 A1H22 B 1 401 401 A1H22 UNL . G 4 HOH A 1 501 382 HOH HOH . G 4 HOH A 2 502 360 HOH HOH . G 4 HOH A 3 503 237 HOH HOH . G 4 HOH A 4 504 160 HOH HOH . G 4 HOH A 5 505 381 HOH HOH . G 4 HOH A 6 506 387 HOH HOH . G 4 HOH A 7 507 259 HOH HOH . G 4 HOH A 8 508 253 HOH HOH . G 4 HOH A 9 509 162 HOH HOH . G 4 HOH A 10 510 509 HOH HOH . G 4 HOH A 11 511 19 HOH HOH . G 4 HOH A 12 512 159 HOH HOH . G 4 HOH A 13 513 69 HOH HOH . G 4 HOH A 14 514 405 HOH HOH . G 4 HOH A 15 515 98 HOH HOH . G 4 HOH A 16 516 507 HOH HOH . G 4 HOH A 17 517 433 HOH HOH . G 4 HOH A 18 518 435 HOH HOH . G 4 HOH A 19 519 46 HOH HOH . G 4 HOH A 20 520 116 HOH HOH . G 4 HOH A 21 521 155 HOH HOH . G 4 HOH A 22 522 14 HOH HOH . G 4 HOH A 23 523 412 HOH HOH . G 4 HOH A 24 524 103 HOH HOH . G 4 HOH A 25 525 436 HOH HOH . G 4 HOH A 26 526 17 HOH HOH . G 4 HOH A 27 527 315 HOH HOH . G 4 HOH A 28 528 110 HOH HOH . G 4 HOH A 29 529 94 HOH HOH . G 4 HOH A 30 530 474 HOH HOH . G 4 HOH A 31 531 406 HOH HOH . G 4 HOH A 32 532 113 HOH HOH . G 4 HOH A 33 533 326 HOH HOH . G 4 HOH A 34 534 490 HOH HOH . G 4 HOH A 35 535 349 HOH HOH . G 4 HOH A 36 536 508 HOH HOH . G 4 HOH A 37 537 254 HOH HOH . G 4 HOH A 38 538 136 HOH HOH . G 4 HOH A 39 539 122 HOH HOH . H 4 HOH B 1 501 352 HOH HOH . H 4 HOH B 2 502 213 HOH HOH . H 4 HOH B 3 503 45 HOH HOH . H 4 HOH B 4 504 390 HOH HOH . H 4 HOH B 5 505 202 HOH HOH . H 4 HOH B 6 506 403 HOH HOH . H 4 HOH B 7 507 201 HOH HOH . H 4 HOH B 8 508 483 HOH HOH . H 4 HOH B 9 509 221 HOH HOH . H 4 HOH B 10 510 465 HOH HOH . H 4 HOH B 11 511 211 HOH HOH . H 4 HOH B 12 512 481 HOH HOH . H 4 HOH B 13 513 366 HOH HOH . H 4 HOH B 14 514 488 HOH HOH . H 4 HOH B 15 515 30 HOH HOH . H 4 HOH B 16 516 400 HOH HOH . H 4 HOH B 17 517 424 HOH HOH . H 4 HOH B 18 518 373 HOH HOH . H 4 HOH B 19 519 284 HOH HOH . H 4 HOH B 20 520 402 HOH HOH . H 4 HOH B 21 521 425 HOH HOH . H 4 HOH B 22 522 430 HOH HOH . H 4 HOH B 23 523 365 HOH HOH . H 4 HOH B 24 524 182 HOH HOH . H 4 HOH B 25 525 193 HOH HOH . H 4 HOH B 26 526 280 HOH HOH . H 4 HOH B 27 527 279 HOH HOH . H 4 HOH B 28 528 480 HOH HOH . H 4 HOH B 29 529 15 HOH HOH . H 4 HOH B 30 530 289 HOH HOH . H 4 HOH B 31 531 230 HOH HOH . H 4 HOH B 32 532 189 HOH HOH . H 4 HOH B 33 533 205 HOH HOH . H 4 HOH B 34 534 428 HOH HOH . H 4 HOH B 35 535 397 HOH HOH . H 4 HOH B 36 536 495 HOH HOH . H 4 HOH B 37 537 328 HOH HOH . H 4 HOH B 38 538 429 HOH HOH . H 4 HOH B 39 539 209 HOH HOH . H 4 HOH B 40 540 391 HOH HOH . H 4 HOH B 41 541 287 HOH HOH . H 4 HOH B 42 542 431 HOH HOH . H 4 HOH B 43 543 225 HOH HOH . H 4 HOH B 44 544 346 HOH HOH . H 4 HOH B 45 545 522 HOH HOH . H 4 HOH B 46 546 57 HOH HOH . I 4 HOH C 1 101 118 HOH HOH . I 4 HOH C 2 102 255 HOH HOH . J 4 HOH E 1 101 413 HOH HOH . J 4 HOH E 2 102 199 HOH HOH . J 4 HOH E 3 103 407 HOH HOH . J 4 HOH E 4 104 484 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 A1H22 . . . F 3 28.587 -41.298 17.108 1 36.5 ? C1 A1H22 401 B 1 HETATM 2 C C2 A1H22 . . . F 3 28.572 -40.273 18.191 1 36.76 ? C2 A1H22 401 B 1 HETATM 3 C C3 A1H22 . . . F 3 30.349 -41.26 19.331 1 40.77 ? C3 A1H22 401 B 1 HETATM 4 C C4 A1H22 . . . F 3 31.199 -41.27 20.583 1 32.19 ? C4 A1H22 401 B 1 HETATM 5 C C5 A1H22 . . . F 3 32.714 -41.142 20.386 1 30.84 ? C5 A1H22 401 B 1 HETATM 6 C C8 A1H22 . . . F 3 34.655 -42.115 19.216 1 36.3 ? C8 A1H22 401 B 1 HETATM 7 C C9 A1H22 . . . F 3 35.165 -43.358 18.546 1 36.97 ? C9 A1H22 401 B 1 HETATM 8 O O1 A1H22 . . . F 3 28.708 -40.739 15.813 1 36.83 ? O1 A1H22 401 B 1 HETATM 9 O O2 A1H22 . . . F 3 29.007 -40.783 19.449 1 38.61 ? O2 A1H22 401 B 1 HETATM 10 O O5 A1H22 . . . F 3 33.297 -42.206 19.63 1 42.3 ? O5 A1H22 401 B 1 HETATM 11 O O6 A1H22 . . . F 3 34.603 -43.75 17.294 1 39.13 ? O6 A1H22 401 B 1 HETATM 12 O O3 A1H22 . . . F 3 30.741 -40.052 21.159 1 39.43 ? O3 A1H22 401 B 1 # _model_server_stats.io_time_ms 80 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #