data_8RWD
#
_model_server_result.job_id            Qfk7nkqCV31Sso5lsEibaw 
_model_server_result.datetime_utc      '2025-01-10 06:15:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8rwd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1201}' 
#
_entry.id    8RWD 
#
_exptl.entry_id    8RWD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              370.402 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,3-diethyl-8-[(~{E})-2-(4-methoxy-3-oxidanyl-phenyl)ethenyl]-7-methyl-purine-2,6-dione 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8RWD 
_cell.length_a            39.327 
_cell.length_b            179.01 
_cell.length_c            139.328 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8RWD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 96 A CYS 71 1_555 A SG CYS 184 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 A SG CYS 99 A CYS 74 1_555 A SG CYS 171 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 A SG CYS 102 A CYS 77 1_555 A SG CYS 191 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf4 A SG CYS 380 A CYS 259 1_555 A SG CYS 383 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
metalc ? metalc1 A OD1 ASP 77 A ASP 52 1_555 FA NA NA . A NA 1231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? 
metalc ? metalc2 A OG SER 116 A SER 91 1_555 FA NA NA . A NA 1231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? 
metalc ? metalc3 FA NA NA . A NA 1231 1_555 GA O HOH . A HOH 1309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.007 ? 
metalc ? metalc4 FA NA NA . A NA 1231 1_555 GA O HOH . A HOH 1317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.977 ? 
#
_chem_comp.formula           'C19 H22 N4 O4' 
_chem_comp.formula_weight    370.402 
_chem_comp.id                A1H3H 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,3-diethyl-8-[(~{E})-2-(4-methoxy-3-oxidanyl-phenyl)ethenyl]-7-methyl-purine-2,6-dione 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2 C13 A1H3H sing 1 n n 
C13 C12 A1H3H doub 2 n y 
C13 C14 A1H3H sing 3 n y 
O1 C14 A1H3H sing 4 n n 
O1 C15 A1H3H sing 5 n n 
C12 C11 A1H3H sing 6 n y 
C14 C16 A1H3H doub 7 n y 
C11 C17 A1H3H doub 8 n y 
C11 C10 A1H3H sing 9 n n 
C16 C17 A1H3H sing 10 n y 
C10 C9 A1H3H doub 11 e n 
C3 C4 A1H3H sing 12 n n 
C3 N1 A1H3H sing 13 n n 
C9 C8 A1H3H sing 14 n n 
N3 C8 A1H3H doub 15 n y 
N3 C5 A1H3H sing 16 n y 
C8 N2 A1H3H sing 17 n y 
N1 C5 A1H3H sing 18 n n 
N1 C2 A1H3H sing 19 n n 
C5 C6 A1H3H doub 20 n y 
O C2 A1H3H doub 21 n n 
N2 C6 A1H3H sing 22 n y 
N2 C7 A1H3H sing 23 n n 
C2 N A1H3H sing 24 n n 
C6 C19 A1H3H sing 25 n n 
N C19 A1H3H sing 26 n n 
N C1 A1H3H sing 27 n n 
C C1 A1H3H sing 28 n n 
C19 O3 A1H3H doub 29 n n 
C4 H1 A1H3H sing 30 n n 
C4 H2 A1H3H sing 31 n n 
C4 H3 A1H3H sing 32 n n 
C15 H4 A1H3H sing 33 n n 
C15 H5 A1H3H sing 34 n n 
C15 H6 A1H3H sing 35 n n 
C9 H7 A1H3H sing 36 n n 
C17 H8 A1H3H sing 37 n n 
C1 H9 A1H3H sing 38 n n 
C1 H10 A1H3H sing 39 n n 
C3 H11 A1H3H sing 40 n n 
C3 H12 A1H3H sing 41 n n 
C16 H13 A1H3H sing 42 n n 
C H14 A1H3H sing 43 n n 
C H15 A1H3H sing 44 n n 
C H16 A1H3H sing 45 n n 
C10 H17 A1H3H sing 46 n n 
C12 H18 A1H3H sing 47 n n 
C7 H19 A1H3H sing 48 n n 
C7 H20 A1H3H sing 49 n n 
C7 H21 A1H3H sing 50 n n 
O2 H22 A1H3H sing 51 n n 
#
_atom_sites.entry_id                     8RWD 
_atom_sites.fract_transf_matrix[1][1]    0.025428 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005586 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007177 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 A1H3H A 1 1201 1201 A1H3H 3DM . 
C 3 CLR A 1 1202 1202 CLR CLR . 
D 3 CLR A 1 1203 1203 CLR CLR . 
E 3 CLR A 1 1204 1204 CLR CLR . 
F 4 OLA A 1 1205 1205 OLA OLA . 
G 4 OLA A 1 1206 1206 OLA OLA . 
H 4 OLA A 1 1207 1207 OLA OLA . 
I 4 OLA A 1 1208 1208 OLA OLA . 
J 4 OLA A 1 1209 1209 OLA OLA . 
K 4 OLA A 1 1210 1210 OLA OLA . 
L 4 OLA A 1 1211 1211 OLA OLA . 
M 4 OLA A 1 1212 1212 OLA OLA . 
N 4 OLA A 1 1213 1213 OLA OLA . 
O 4 OLA A 1 1214 1214 OLA OLA . 
P 4 OLA A 1 1215 1215 OLA OLA . 
Q 4 OLA A 1 1216 1216 OLA OLA . 
R 4 OLA A 1 1217 1217 OLA OLA . 
S 4 OLA A 1 1218 1218 OLA OLA . 
T 4 OLA A 1 1219 1219 OLA OLA . 
U 4 OLA A 1 1220 1220 OLA OLA . 
V 4 OLA A 1 1221 1221 OLA OLA . 
W 4 OLA A 1 1222 1222 OLA OLA . 
X 4 OLA A 1 1223 1223 OLA OLA . 
Y 4 OLA A 1 1224 1224 OLA OLA . 
Z 4 OLA A 1 1225 1225 OLA OLA . 
AA 4 OLA A 1 1226 1226 OLA OLA . 
BA 4 OLA A 1 1227 1227 OLA OLA . 
CA 4 OLA A 1 1228 1228 OLA OLA . 
DA 4 OLA A 1 1229 1229 OLA OLA . 
EA 4 OLA A 1 1230 1230 OLA OLA . 
FA 5 NA A 1 1231 1 NA NA . 
GA 6 HOH A 1 1301 89 HOH HOH . 
GA 6 HOH A 2 1302 59 HOH HOH . 
GA 6 HOH A 3 1303 96 HOH HOH . 
GA 6 HOH A 4 1304 80 HOH HOH . 
GA 6 HOH A 5 1305 31 HOH HOH . 
GA 6 HOH A 6 1306 63 HOH HOH . 
GA 6 HOH A 7 1307 54 HOH HOH . 
GA 6 HOH A 8 1308 85 HOH HOH . 
GA 6 HOH A 9 1309 23 HOH HOH . 
GA 6 HOH A 10 1310 78 HOH HOH . 
GA 6 HOH A 11 1311 93 HOH HOH . 
GA 6 HOH A 12 1312 58 HOH HOH . 
GA 6 HOH A 13 1313 17 HOH HOH . 
GA 6 HOH A 14 1314 30 HOH HOH . 
GA 6 HOH A 15 1315 69 HOH HOH . 
GA 6 HOH A 16 1316 48 HOH HOH . 
GA 6 HOH A 17 1317 40 HOH HOH . 
GA 6 HOH A 18 1318 3 HOH HOH . 
GA 6 HOH A 19 1319 100 HOH HOH . 
GA 6 HOH A 20 1320 28 HOH HOH . 
GA 6 HOH A 21 1321 83 HOH HOH . 
GA 6 HOH A 22 1322 75 HOH HOH . 
GA 6 HOH A 23 1323 19 HOH HOH . 
GA 6 HOH A 24 1324 55 HOH HOH . 
GA 6 HOH A 25 1325 16 HOH HOH . 
GA 6 HOH A 26 1326 25 HOH HOH . 
GA 6 HOH A 27 1327 14 HOH HOH . 
GA 6 HOH A 28 1328 26 HOH HOH . 
GA 6 HOH A 29 1329 73 HOH HOH . 
GA 6 HOH A 30 1330 35 HOH HOH . 
GA 6 HOH A 31 1331 22 HOH HOH . 
GA 6 HOH A 32 1332 8 HOH HOH . 
GA 6 HOH A 33 1333 86 HOH HOH . 
GA 6 HOH A 34 1334 10 HOH HOH . 
GA 6 HOH A 35 1335 2 HOH HOH . 
GA 6 HOH A 36 1336 33 HOH HOH . 
GA 6 HOH A 37 1337 61 HOH HOH . 
GA 6 HOH A 38 1338 37 HOH HOH . 
GA 6 HOH A 39 1339 12 HOH HOH . 
GA 6 HOH A 40 1340 11 HOH HOH . 
GA 6 HOH A 41 1341 4 HOH HOH . 
GA 6 HOH A 42 1342 43 HOH HOH . 
GA 6 HOH A 43 1343 1 HOH HOH . 
GA 6 HOH A 44 1344 13 HOH HOH . 
GA 6 HOH A 45 1345 72 HOH HOH . 
GA 6 HOH A 46 1346 32 HOH HOH . 
GA 6 HOH A 47 1347 39 HOH HOH . 
GA 6 HOH A 48 1348 27 HOH HOH . 
GA 6 HOH A 49 1349 49 HOH HOH . 
GA 6 HOH A 50 1350 21 HOH HOH . 
GA 6 HOH A 51 1351 41 HOH HOH . 
GA 6 HOH A 52 1352 84 HOH HOH . 
GA 6 HOH A 53 1353 5 HOH HOH . 
GA 6 HOH A 54 1354 44 HOH HOH . 
GA 6 HOH A 55 1355 68 HOH HOH . 
GA 6 HOH A 56 1356 34 HOH HOH . 
GA 6 HOH A 57 1357 18 HOH HOH . 
GA 6 HOH A 58 1358 99 HOH HOH . 
GA 6 HOH A 59 1359 15 HOH HOH . 
GA 6 HOH A 60 1360 52 HOH HOH . 
GA 6 HOH A 61 1361 65 HOH HOH . 
GA 6 HOH A 62 1362 67 HOH HOH . 
GA 6 HOH A 63 1363 6 HOH HOH . 
GA 6 HOH A 64 1364 56 HOH HOH . 
GA 6 HOH A 65 1365 20 HOH HOH . 
GA 6 HOH A 66 1366 64 HOH HOH . 
GA 6 HOH A 67 1367 46 HOH HOH . 
GA 6 HOH A 68 1368 24 HOH HOH . 
GA 6 HOH A 69 1369 102 HOH HOH . 
GA 6 HOH A 70 1370 38 HOH HOH . 
GA 6 HOH A 71 1371 42 HOH HOH . 
GA 6 HOH A 72 1372 74 HOH HOH . 
GA 6 HOH A 73 1373 7 HOH HOH . 
GA 6 HOH A 74 1374 70 HOH HOH . 
GA 6 HOH A 75 1375 92 HOH HOH . 
GA 6 HOH A 76 1376 101 HOH HOH . 
GA 6 HOH A 77 1377 60 HOH HOH . 
GA 6 HOH A 78 1378 29 HOH HOH . 
GA 6 HOH A 79 1379 62 HOH HOH . 
GA 6 HOH A 80 1380 95 HOH HOH . 
GA 6 HOH A 81 1381 90 HOH HOH . 
GA 6 HOH A 82 1382 87 HOH HOH . 
GA 6 HOH A 83 1383 71 HOH HOH . 
GA 6 HOH A 84 1384 36 HOH HOH . 
GA 6 HOH A 85 1385 51 HOH HOH . 
GA 6 HOH A 86 1386 9 HOH HOH . 
GA 6 HOH A 87 1387 47 HOH HOH . 
GA 6 HOH A 88 1388 66 HOH HOH . 
GA 6 HOH A 89 1389 45 HOH HOH . 
GA 6 HOH A 90 1390 79 HOH HOH . 
GA 6 HOH A 91 1391 91 HOH HOH . 
GA 6 HOH A 92 1392 97 HOH HOH . 
GA 6 HOH A 93 1393 98 HOH HOH . 
GA 6 HOH A 94 1394 57 HOH HOH . 
GA 6 HOH A 95 1395 53 HOH HOH . 
GA 6 HOH A 96 1396 77 HOH HOH . 
GA 6 HOH A 97 1397 81 HOH HOH . 
GA 6 HOH A 98 1398 88 HOH HOH . 
GA 6 HOH A 99 1399 76 HOH HOH . 
GA 6 HOH A 100 1400 82 HOH HOH . 
GA 6 HOH A 101 1401 50 HOH HOH . 
GA 6 HOH A 102 1402 94 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 A1H3H . . . B 2 -22.641 5.573 16.962 1 27.01 ? N1 A1H3H 1201 A 1 
HETATM 2 N N3 A1H3H . . . B 2 -21.86 7.814 16.306 1 21.16 ? N3 A1H3H 1201 A 1 
HETATM 3 C C4 A1H3H . . . B 2 -25.007 6 16.399 1 30.45 ? C4 A1H3H 1201 A 1 
HETATM 4 C C5 A1H3H . . . B 2 -21.746 6.627 16.973 1 23.06 ? C5 A1H3H 1201 A 1 
HETATM 5 C C6 A1H3H . . . B 2 -20.604 6.55 17.716 1 22.01 ? C6 A1H3H 1201 A 1 
HETATM 6 C C8 A1H3H . . . B 2 -20.752 8.473 16.651 1 25.5 ? C8 A1H3H 1201 A 1 
HETATM 7 C C13 A1H3H . . . B 2 -21.699 13.872 13.766 1 46.82 ? C13 A1H3H 1201 A 1 
HETATM 8 C C15 A1H3H . . . B 2 -19.144 16.44 13.681 1 66.57 ? C15 A1H3H 1201 A 1 
HETATM 9 C C9 A1H3H . . . B 2 -20.405 9.814 16.209 1 23.91 ? C9 A1H3H 1201 A 1 
HETATM 10 C C17 A1H3H . . . B 2 -19.749 12.567 15.245 1 34.15 ? C17 A1H3H 1201 A 1 
HETATM 11 C C1 A1H3H . . . B 2 -21.054 3.26 19.366 1 21.56 ? C1 A1H3H 1201 A 1 
HETATM 12 C C2 A1H3H . . . B 2 -22.346 4.396 17.625 1 26.47 ? C2 A1H3H 1201 A 1 
HETATM 13 C C3 A1H3H . . . B 2 -23.664 5.523 15.903 1 29.93 ? C3 A1H3H 1201 A 1 
HETATM 14 C C14 A1H3H . . . B 2 -20.512 14.532 14.108 1 51.68 ? C14 A1H3H 1201 A 1 
HETATM 15 C C16 A1H3H . . . B 2 -19.537 13.876 14.846 1 39.32 ? C16 A1H3H 1201 A 1 
HETATM 16 C C19 A1H3H . . . B 2 -20.288 5.44 18.572 1 25.77 ? C19 A1H3H 1201 A 1 
HETATM 17 O O1 A1H3H . . . B 2 -20.428 15.822 13.665 1 61.73 ? O1 A1H3H 1201 A 1 
HETATM 18 N N A1H3H . . . B 2 -21.256 4.426 18.485 1 22.92 ? N A1H3H 1201 A 1 
HETATM 19 C C A1H3H . . . B 2 -20.105 2.238 18.797 1 30.63 ? C A1H3H 1201 A 1 
HETATM 20 O O A1H3H . . . B 2 -23.006 3.386 17.46 1 32.58 ? O A1H3H 1201 A 1 
HETATM 21 C C10 A1H3H . . . B 2 -21.179 10.531 15.402 1 28.55 ? C10 A1H3H 1201 A 1 
HETATM 22 C C11 A1H3H . . . B 2 -20.923 11.892 14.917 1 36.15 ? C11 A1H3H 1201 A 1 
HETATM 23 C C12 A1H3H . . . B 2 -21.892 12.56 14.164 1 38.08 ? C12 A1H3H 1201 A 1 
HETATM 24 C C7 A1H3H . . . B 2 -18.673 8.175 18.068 1 20.89 ? C7 A1H3H 1201 A 1 
HETATM 25 N N2 A1H3H . . . B 2 -19.952 7.751 17.495 1 25.37 ? N2 A1H3H 1201 A 1 
HETATM 26 O O2 A1H3H . . . B 2 -22.67 14.514 13.067 1 49.23 ? O2 A1H3H 1201 A 1 
HETATM 27 O O3 A1H3H . . . B 2 -19.303 5.313 19.289 1 26.4 ? O3 A1H3H 1201 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    32 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           27 
#