data_8RWE # _model_server_result.job_id EUhvzITUSJsbzDx8KR85tg _model_server_result.datetime_utc '2025-01-09 23:43:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8rwe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":1216}' # _entry.id 8RWE # _exptl.entry_id 8RWE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8RWE _cell.length_a 39.29 _cell.length_b 178.708 _cell.length_c 139.049 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RWE _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 J N N ? 5 P N N ? 5 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 96 A CYS 71 1_555 A SG CYS 184 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 99 A CYS 74 1_555 A SG CYS 171 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 102 A CYS 77 1_555 A SG CYS 191 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf4 A SG CYS 380 A CYS 259 1_555 A SG CYS 383 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc1 A OD2 ASP 77 A ASP 52 1_555 FA NA NA . A NA 1231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? metalc ? metalc2 A OG SER 116 A SER 91 1_555 FA NA NA . A NA 1231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? metalc ? metalc3 FA NA NA . A NA 1231 1_555 GA O HOH . A HOH 1314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.851 ? metalc ? metalc4 FA NA NA . A NA 1231 1_555 GA O HOH . A HOH 1330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? metalc ? metalc5 FA NA NA . A NA 1231 1_555 GA O HOH . A HOH 1347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.893 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 418 n n C10 C9 OLC doub 419 n n C10 C11 OLC sing 420 n n C9 C8 OLC sing 421 n n C17 C16 OLC sing 422 z n C11 C12 OLC sing 423 n n C8 C7 OLC sing 424 n n C24 C22 OLC sing 425 n n C24 O25 OLC sing 426 n n C16 C15 OLC sing 427 n n C12 C13 OLC sing 428 n n C7 C6 OLC sing 429 n n C15 C14 OLC sing 430 n n C13 C14 OLC sing 431 n n C6 C5 OLC sing 432 n n C5 C4 OLC sing 433 n n C4 C3 OLC sing 434 n n C3 C2 OLC sing 435 n n C2 C1 OLC sing 436 n n C21 C22 OLC sing 437 n n C21 O20 OLC sing 438 n n C1 O19 OLC doub 439 n n C1 O20 OLC sing 440 n n C22 O23 OLC sing 441 n n C18 H18 OLC sing 442 n n C18 H18A OLC sing 443 n n C18 H18B OLC sing 444 n n C10 H10 OLC sing 445 n n C9 H9 OLC sing 446 n n C17 H17 OLC sing 447 n n C17 H17A OLC sing 448 n n C11 H11 OLC sing 449 n n C11 H11A OLC sing 450 n n C8 H8 OLC sing 451 n n C8 H8A OLC sing 452 n n C24 H24 OLC sing 453 n n C24 H24A OLC sing 454 n n C16 H16 OLC sing 455 n n C16 H16A OLC sing 456 n n C12 H12 OLC sing 457 n n C12 H12A OLC sing 458 n n C7 H7 OLC sing 459 n n C7 H7A OLC sing 460 n n C15 H15 OLC sing 461 n n C15 H15A OLC sing 462 n n C13 H13 OLC sing 463 n n C13 H13A OLC sing 464 n n C6 H6 OLC sing 465 n n C6 H6A OLC sing 466 n n C14 H14 OLC sing 467 n n C14 H14A OLC sing 468 n n C5 H5 OLC sing 469 n n C5 H5A OLC sing 470 n n C4 H4 OLC sing 471 n n C4 H4A OLC sing 472 n n C3 H3 OLC sing 473 n n C3 H3A OLC sing 474 n n C2 H2 OLC sing 475 n n C2 H2A OLC sing 476 n n C21 H21 OLC sing 477 n n C21 H21A OLC sing 478 n n C22 H22 OLC sing 479 n n O25 HO25 OLC sing 480 n n O23 HO23 OLC sing 481 n n # _atom_sites.entry_id 8RWE _atom_sites.fract_transf_matrix[1][1] 0.025452 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005596 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007192 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1H3K A 1 1201 1201 A1H3K 4DM . C 3 CLR A 1 1202 1202 CLR CLR . D 3 CLR A 1 1203 1203 CLR CLR . E 3 CLR A 1 1204 1204 CLR CLR . F 4 OLA A 1 1205 1205 OLA OLA . G 4 OLA A 1 1206 1206 OLA OLA . H 4 OLA A 1 1207 1207 OLA OLA . I 4 OLA A 1 1208 1208 OLA OLA . J 5 OLC A 1 1209 1209 OLC OLC . K 4 OLA A 1 1210 1210 OLA OLA . L 4 OLA A 1 1211 1211 OLA OLA . M 4 OLA A 1 1212 1212 OLA OLA . N 4 OLA A 1 1213 1213 OLA OLA . O 4 OLA A 1 1214 1214 OLA OLA . P 5 OLC A 1 1215 1215 OLC OLC . Q 5 OLC A 1 1216 1216 OLC OLC . R 4 OLA A 1 1217 1217 OLA OLA . S 4 OLA A 1 1218 1218 OLA OLA . T 4 OLA A 1 1219 1219 OLA OLA . U 4 OLA A 1 1220 1220 OLA OLA . V 4 OLA A 1 1221 1221 OLA OLA . W 4 OLA A 1 1222 1222 OLA OLA . X 4 OLA A 1 1223 1223 OLA OLA . Y 4 OLA A 1 1224 1224 OLA OLA . Z 4 OLA A 1 1225 1225 OLA OLA . AA 4 OLA A 1 1226 1226 OLA OLA . BA 4 OLA A 1 1227 1227 OLA OLA . CA 4 OLA A 1 1228 1228 OLA OLA . DA 4 OLA A 1 1229 1229 OLA OLA . EA 4 OLA A 1 1230 1230 OLA OLA . FA 6 NA A 1 1231 1 NA NA . GA 7 HOH A 1 1301 90 HOH HOH . GA 7 HOH A 2 1302 49 HOH HOH . GA 7 HOH A 3 1303 46 HOH HOH . GA 7 HOH A 4 1304 32 HOH HOH . GA 7 HOH A 5 1305 24 HOH HOH . GA 7 HOH A 6 1306 62 HOH HOH . GA 7 HOH A 7 1307 10 HOH HOH . GA 7 HOH A 8 1308 42 HOH HOH . GA 7 HOH A 9 1309 99 HOH HOH . GA 7 HOH A 10 1310 21 HOH HOH . GA 7 HOH A 11 1311 102 HOH HOH . GA 7 HOH A 12 1312 64 HOH HOH . GA 7 HOH A 13 1313 72 HOH HOH . GA 7 HOH A 14 1314 4 HOH HOH . GA 7 HOH A 15 1315 34 HOH HOH . GA 7 HOH A 16 1316 92 HOH HOH . GA 7 HOH A 17 1317 15 HOH HOH . GA 7 HOH A 18 1318 100 HOH HOH . GA 7 HOH A 19 1319 52 HOH HOH . GA 7 HOH A 20 1320 86 HOH HOH . GA 7 HOH A 21 1321 14 HOH HOH . GA 7 HOH A 22 1322 17 HOH HOH . GA 7 HOH A 23 1323 45 HOH HOH . GA 7 HOH A 24 1324 55 HOH HOH . GA 7 HOH A 25 1325 22 HOH HOH . GA 7 HOH A 26 1326 36 HOH HOH . GA 7 HOH A 27 1327 29 HOH HOH . GA 7 HOH A 28 1328 66 HOH HOH . GA 7 HOH A 29 1329 6 HOH HOH . GA 7 HOH A 30 1330 61 HOH HOH . GA 7 HOH A 31 1331 11 HOH HOH . GA 7 HOH A 32 1332 83 HOH HOH . GA 7 HOH A 33 1333 9 HOH HOH . GA 7 HOH A 34 1334 23 HOH HOH . GA 7 HOH A 35 1335 8 HOH HOH . GA 7 HOH A 36 1336 1 HOH HOH . GA 7 HOH A 37 1337 101 HOH HOH . GA 7 HOH A 38 1338 27 HOH HOH . GA 7 HOH A 39 1339 2 HOH HOH . GA 7 HOH A 40 1340 19 HOH HOH . GA 7 HOH A 41 1341 96 HOH HOH . GA 7 HOH A 42 1342 3 HOH HOH . GA 7 HOH A 43 1343 25 HOH HOH . GA 7 HOH A 44 1344 18 HOH HOH . GA 7 HOH A 45 1345 58 HOH HOH . GA 7 HOH A 46 1346 70 HOH HOH . GA 7 HOH A 47 1347 41 HOH HOH . GA 7 HOH A 48 1348 39 HOH HOH . GA 7 HOH A 49 1349 20 HOH HOH . GA 7 HOH A 50 1350 71 HOH HOH . GA 7 HOH A 51 1351 51 HOH HOH . GA 7 HOH A 52 1352 28 HOH HOH . GA 7 HOH A 53 1353 38 HOH HOH . GA 7 HOH A 54 1354 97 HOH HOH . GA 7 HOH A 55 1355 33 HOH HOH . GA 7 HOH A 56 1356 13 HOH HOH . GA 7 HOH A 57 1357 69 HOH HOH . GA 7 HOH A 58 1358 16 HOH HOH . GA 7 HOH A 59 1359 12 HOH HOH . GA 7 HOH A 60 1360 65 HOH HOH . GA 7 HOH A 61 1361 37 HOH HOH . GA 7 HOH A 62 1362 7 HOH HOH . GA 7 HOH A 63 1363 35 HOH HOH . GA 7 HOH A 64 1364 47 HOH HOH . GA 7 HOH A 65 1365 78 HOH HOH . GA 7 HOH A 66 1366 30 HOH HOH . GA 7 HOH A 67 1367 57 HOH HOH . GA 7 HOH A 68 1368 43 HOH HOH . GA 7 HOH A 69 1369 103 HOH HOH . GA 7 HOH A 70 1370 44 HOH HOH . GA 7 HOH A 71 1371 88 HOH HOH . GA 7 HOH A 72 1372 26 HOH HOH . GA 7 HOH A 73 1373 89 HOH HOH . GA 7 HOH A 74 1374 56 HOH HOH . GA 7 HOH A 75 1375 77 HOH HOH . GA 7 HOH A 76 1376 95 HOH HOH . GA 7 HOH A 77 1377 76 HOH HOH . GA 7 HOH A 78 1378 93 HOH HOH . GA 7 HOH A 79 1379 31 HOH HOH . GA 7 HOH A 80 1380 68 HOH HOH . GA 7 HOH A 81 1381 98 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 OLC . . . Q 5 -37.661 4.388 5.413 1 65.69 ? C10 OLC 1216 A 1 HETATM 2 C C9 OLC . . . Q 5 -37.467 5.621 4.913 1 76.4 ? C9 OLC 1216 A 1 HETATM 3 C C8 OLC . . . Q 5 -36.84 7.046 4.955 1 72.33 ? C8 OLC 1216 A 1 HETATM 4 C C24 OLC . . . Q 5 -30.038 16.179 7.602 1 59.32 ? C24 OLC 1216 A 1 HETATM 5 C C7 OLC . . . Q 5 -36.391 7.364 6.406 1 80.42 ? C7 OLC 1216 A 1 HETATM 6 C C6 OLC . . . Q 5 -36.323 8.906 6.61 1 72.26 ? C6 OLC 1216 A 1 HETATM 7 C C5 OLC . . . Q 5 -35.983 9.213 8.095 1 69.45 ? C5 OLC 1216 A 1 HETATM 8 C C4 OLC . . . Q 5 -35.042 10.449 8.171 1 69.9 ? C4 OLC 1216 A 1 HETATM 9 C C3 OLC . . . Q 5 -35.89 11.745 8.059 1 77.31 ? C3 OLC 1216 A 1 HETATM 10 C C2 OLC . . . Q 5 -35.178 12.912 8.798 1 84.16 ? C2 OLC 1216 A 1 HETATM 11 C C21 OLC . . . Q 5 -31.961 14.601 7.897 1 79.47 ? C21 OLC 1216 A 1 HETATM 12 C C1 OLC . . . Q 5 -34.069 13.523 7.905 1 88.94 ? C1 OLC 1216 A 1 HETATM 13 C C22 OLC . . . Q 5 -31.176 15.753 8.537 1 80.35 ? C22 OLC 1216 A 1 HETATM 14 O O19 OLC . . . Q 5 -33.864 13.087 6.816 1 97.93 ? O19 OLC 1216 A 1 HETATM 15 O O25 OLC . . . Q 5 -28.813 15.942 8.256 1 78.26 ? O25 OLC 1216 A 1 HETATM 16 O O23 OLC . . . Q 5 -32.032 16.832 8.773 1 101.07 ? O23 OLC 1216 A 1 HETATM 17 O O20 OLC . . . Q 5 -33.293 14.605 8.38 1 84.82 ? O20 OLC 1216 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 17 #