data_8RWH # _model_server_result.job_id OcJL6xQOT5x-su72KraWmA _model_server_result.datetime_utc '2025-01-10 06:23:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8rwh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Y","auth_seq_id":1224}' # _entry.id 8RWH # _exptl.entry_id 8RWH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8RWH _cell.length_a 40.55 _cell.length_b 182.54 _cell.length_c 143.66 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8RWH _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id Y _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 96 A CYS 71 1_555 A SG CYS 184 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 99 A CYS 74 1_555 A SG CYS 171 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf3 A SG CYS 102 A CYS 77 1_555 A SG CYS 191 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf4 A SG CYS 380 A CYS 259 1_555 A SG CYS 383 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc1 A OD1 ASP 77 A ASP 52 1_555 DA NA NA . A NA 1229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc2 A OG SER 116 A SER 91 1_555 DA NA NA . A NA 1229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.914 ? metalc ? metalc3 DA NA NA . A NA 1229 1_555 EA O HOH . A HOH 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? metalc ? metalc4 DA NA NA . A NA 1229 1_555 EA O HOH . A HOH 1317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc5 DA NA NA . A NA 1229 1_555 EA O HOH . A HOH 1325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 479 n n C10 C9 OLC doub 480 n n C10 C11 OLC sing 481 n n C9 C8 OLC sing 482 n n C17 C16 OLC sing 483 z n C11 C12 OLC sing 484 n n C8 C7 OLC sing 485 n n C24 C22 OLC sing 486 n n C24 O25 OLC sing 487 n n C16 C15 OLC sing 488 n n C12 C13 OLC sing 489 n n C7 C6 OLC sing 490 n n C15 C14 OLC sing 491 n n C13 C14 OLC sing 492 n n C6 C5 OLC sing 493 n n C5 C4 OLC sing 494 n n C4 C3 OLC sing 495 n n C3 C2 OLC sing 496 n n C2 C1 OLC sing 497 n n C21 C22 OLC sing 498 n n C21 O20 OLC sing 499 n n C1 O19 OLC doub 500 n n C1 O20 OLC sing 501 n n C22 O23 OLC sing 502 n n C18 H18 OLC sing 503 n n C18 H18A OLC sing 504 n n C18 H18B OLC sing 505 n n C10 H10 OLC sing 506 n n C9 H9 OLC sing 507 n n C17 H17 OLC sing 508 n n C17 H17A OLC sing 509 n n C11 H11 OLC sing 510 n n C11 H11A OLC sing 511 n n C8 H8 OLC sing 512 n n C8 H8A OLC sing 513 n n C24 H24 OLC sing 514 n n C24 H24A OLC sing 515 n n C16 H16 OLC sing 516 n n C16 H16A OLC sing 517 n n C12 H12 OLC sing 518 n n C12 H12A OLC sing 519 n n C7 H7 OLC sing 520 n n C7 H7A OLC sing 521 n n C15 H15 OLC sing 522 n n C15 H15A OLC sing 523 n n C13 H13 OLC sing 524 n n C13 H13A OLC sing 525 n n C6 H6 OLC sing 526 n n C6 H6A OLC sing 527 n n C14 H14 OLC sing 528 n n C14 H14A OLC sing 529 n n C5 H5 OLC sing 530 n n C5 H5A OLC sing 531 n n C4 H4 OLC sing 532 n n C4 H4A OLC sing 533 n n C3 H3 OLC sing 534 n n C3 H3A OLC sing 535 n n C2 H2 OLC sing 536 n n C2 H2A OLC sing 537 n n C21 H21 OLC sing 538 n n C21 H21A OLC sing 539 n n C22 H22 OLC sing 540 n n O25 HO25 OLC sing 541 n n O23 HO23 OLC sing 542 n n # _atom_sites.entry_id 8RWH _atom_sites.fract_transf_matrix[1][1] 0.024661 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005478 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006961 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1H3I A 1 1201 1201 A1H3I SS2 . C 3 CLR A 1 1202 1202 CLR CLR . D 3 CLR A 1 1203 1203 CLR CLR . E 3 CLR A 1 1204 1204 CLR CLR . F 4 OLA A 1 1205 1205 OLA OLA . G 4 OLA A 1 1206 1206 OLA OLA . H 4 OLA A 1 1207 1207 OLA OLA . I 4 OLA A 1 1208 1208 OLA OLA . J 4 OLA A 1 1209 1209 OLA OLA . K 4 OLA A 1 1210 1210 OLA OLA . L 4 OLA A 1 1211 1211 OLA OLA . M 4 OLA A 1 1212 1212 OLA OLA . N 4 OLA A 1 1213 1213 OLA OLA . O 4 OLA A 1 1214 1214 OLA OLA . P 4 OLA A 1 1215 1215 OLA OLA . Q 4 OLA A 1 1216 1216 OLA OLA . R 4 OLA A 1 1217 1217 OLA OLA . S 4 OLA A 1 1218 1218 OLA OLA . T 4 OLA A 1 1219 1219 OLA OLA . U 4 OLA A 1 1220 1220 OLA OLA . V 4 OLA A 1 1221 1221 OLA OLA . W 4 OLA A 1 1222 1222 OLA OLA . X 5 OLB A 1 1223 1223 OLB OLB . Y 6 OLC A 1 1224 1224 OLC OLC . Z 4 OLA A 1 1225 1225 OLA OLA . AA 4 OLA A 1 1226 1226 OLA OLA . BA 4 OLA A 1 1227 1227 OLA OLA . CA 4 OLA A 1 1228 1228 OLA OLA . DA 7 NA A 1 1229 1 NA NA . EA 8 HOH A 1 1301 21 HOH HOH . EA 8 HOH A 2 1302 18 HOH HOH . EA 8 HOH A 3 1303 14 HOH HOH . EA 8 HOH A 4 1304 20 HOH HOH . EA 8 HOH A 5 1305 16 HOH HOH . EA 8 HOH A 6 1306 11 HOH HOH . EA 8 HOH A 7 1307 2 HOH HOH . EA 8 HOH A 8 1308 24 HOH HOH . EA 8 HOH A 9 1309 23 HOH HOH . EA 8 HOH A 10 1310 6 HOH HOH . EA 8 HOH A 11 1311 5 HOH HOH . EA 8 HOH A 12 1312 22 HOH HOH . EA 8 HOH A 13 1313 17 HOH HOH . EA 8 HOH A 14 1314 10 HOH HOH . EA 8 HOH A 15 1315 9 HOH HOH . EA 8 HOH A 16 1316 1 HOH HOH . EA 8 HOH A 17 1317 26 HOH HOH . EA 8 HOH A 18 1318 19 HOH HOH . EA 8 HOH A 19 1319 3 HOH HOH . EA 8 HOH A 20 1320 12 HOH HOH . EA 8 HOH A 21 1321 7 HOH HOH . EA 8 HOH A 22 1322 8 HOH HOH . EA 8 HOH A 23 1323 25 HOH HOH . EA 8 HOH A 24 1324 4 HOH HOH . EA 8 HOH A 25 1325 15 HOH HOH . EA 8 HOH A 26 1326 13 HOH HOH . EA 8 HOH A 27 1327 27 HOH HOH . EA 8 HOH A 28 1328 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 OLC . . . Y 6 -34.554 -9.006 23.944 1 68.92 ? C10 OLC 1224 A 1 HETATM 2 C C9 OLC . . . Y 6 -34.543 -10.337 23.762 1 69.04 ? C9 OLC 1224 A 1 HETATM 3 C C11 OLC . . . Y 6 -35.101 -8.6 25.332 1 78.02 ? C11 OLC 1224 A 1 HETATM 4 C C8 OLC . . . Y 6 -34.798 -11.799 24.222 1 86.16 ? C8 OLC 1224 A 1 HETATM 5 C C24 OLC . . . Y 6 -32.768 -24.259 25.148 1 104.38 ? C24 OLC 1224 A 1 HETATM 6 C C12 OLC . . . Y 6 -35.675 -7.158 25.244 1 90.62 ? C12 OLC 1224 A 1 HETATM 7 C C7 OLC . . . Y 6 -33.597 -12.688 23.811 1 67.68 ? C7 OLC 1224 A 1 HETATM 8 C C6 OLC . . . Y 6 -34.103 -13.818 22.871 1 67.58 ? C6 OLC 1224 A 1 HETATM 9 C C5 OLC . . . Y 6 -32.955 -14.838 22.638 1 66.99 ? C5 OLC 1224 A 1 HETATM 10 C C4 OLC . . . Y 6 -33.56 -16.204 22.21 1 70.89 ? C4 OLC 1224 A 1 HETATM 11 C C3 OLC . . . Y 6 -32.664 -17.35 22.758 1 63.44 ? C3 OLC 1224 A 1 HETATM 12 C C2 OLC . . . Y 6 -33.562 -18.523 23.231 1 84.62 ? C2 OLC 1224 A 1 HETATM 13 C C21 OLC . . . Y 6 -32.679 -22.029 24.001 1 96.4 ? C21 OLC 1224 A 1 HETATM 14 C C1 OLC . . . Y 6 -32.779 -19.847 23.091 1 97.69 ? C1 OLC 1224 A 1 HETATM 15 C C22 OLC . . . Y 6 -33.406 -23.379 24.062 1 104.07 ? C22 OLC 1224 A 1 HETATM 16 O O19 OLC . . . Y 6 -31.615 -19.813 22.845 1 94.11 ? O19 OLC 1224 A 1 HETATM 17 O O25 OLC . . . Y 6 -33.574 -25.391 25.397 1 103.37 ? O25 OLC 1224 A 1 HETATM 18 O O23 OLC . . . Y 6 -34.754 -23.168 24.357 1 114.98 ? O23 OLC 1224 A 1 HETATM 19 O O20 OLC . . . Y 6 -33.437 -21.09 23.26 1 100.13 ? O20 OLC 1224 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 373 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 19 #