data_8S1L
#
_model_server_result.job_id            P_aealIntzcKvGzsADKmgw 
_model_server_result.datetime_utc      '2025-09-18 04:33:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8s1l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":401}' 
#
_entry.id    8S1L 
#
_exptl.entry_id    8S1L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              411.453 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-[3-BENZYL-5-(4-HYDROXYPHENYL)PYRAZIN-2-YL]-2-(4-HYDROXYPHENYL)ACETAMIDE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8S1L 
_cell.length_a            95.934 
_cell.length_b            95.934 
_cell.length_c            357.132 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8S1L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        145 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,I,J,M,N,O,P 1 1 
E,F,G,H,K,L,Q,R,S,T 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C PHE 65 A PHE 65 1_555 A N1 CRO 66 A CRO 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? 
covale ? covale2 A C3 CRO 66 A CRO 66 1_555 A N ASN 67 A ASN 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? 
covale ? covale3 B C PHE 65 B PHE 65 1_555 B N1 CRO 66 B CRO 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 ? 
covale ? covale4 B C3 CRO 66 B CRO 66 1_555 B N ASN 67 B ASN 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? 
covale ? covale5 E C PHE 65 E PHE 65 1_555 E N1 CRO 66 E CRO 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? 
covale ? covale6 E C3 CRO 66 E CRO 66 1_555 E N ASN 67 E ASN 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? 
covale ? covale7 F C PHE 65 F PHE 65 1_555 F N1 CRO 66 F CRO 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? 
covale ? covale8 F C3 CRO 66 F CRO 66 1_555 F N ASN 67 F ASN 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? 
#
_chem_comp.formula           'C25 H21 N3 O3' 
_chem_comp.formula_weight    411.453 
_chem_comp.id                CEI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-[3-BENZYL-5-(4-HYDROXYPHENYL)PYRAZIN-2-YL]-2-(4-HYDROXYPHENYL)ACETAMIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     COELENTERAMIDE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O33 C2 CEI doub 70 n n 
C2 C10 CEI sing 71 n n 
C2 N1 CEI sing 72 n n 
C10 C11 CEI sing 73 n n 
C10 H101 CEI sing 74 n n 
C10 H102 CEI sing 75 n n 
C11 C12 CEI doub 76 n y 
C11 C16 CEI sing 77 n y 
C12 C13 CEI sing 78 n y 
C12 H12 CEI sing 79 n n 
C13 C14 CEI doub 80 n y 
C13 H13 CEI sing 81 n n 
C14 O17 CEI sing 82 n n 
C14 C15 CEI sing 83 n y 
O17 H17 CEI sing 84 n n 
C15 C16 CEI doub 85 n y 
C15 H15 CEI sing 86 n n 
C16 H16 CEI sing 87 n n 
N1 C9 CEI sing 88 n n 
N1 HN1 CEI sing 89 n n 
C9 C8 CEI doub 90 n y 
C9 N4 CEI sing 91 n y 
C8 C26 CEI sing 92 n n 
C8 N7 CEI sing 93 n y 
C26 C27 CEI sing 94 n n 
C26 H261 CEI sing 95 n n 
C26 H262 CEI sing 96 n n 
C27 C28 CEI doub 97 n y 
C27 C32 CEI sing 98 n y 
C28 C29 CEI sing 99 n y 
C28 H28 CEI sing 100 n n 
C29 C30 CEI doub 101 n y 
C29 H29 CEI sing 102 n n 
C30 C31 CEI sing 103 n y 
C30 H30 CEI sing 104 n n 
C31 C32 CEI doub 105 n y 
C31 H31 CEI sing 106 n n 
C32 H32 CEI sing 107 n n 
N7 C6 CEI doub 108 n y 
C6 C5 CEI sing 109 n y 
C6 C19 CEI sing 110 n y 
C5 N4 CEI doub 111 n y 
C5 H5 CEI sing 112 n n 
C19 C20 CEI doub 113 n y 
C19 C24 CEI sing 114 n y 
C20 C21 CEI sing 115 n y 
C20 H20 CEI sing 116 n n 
C21 C22 CEI doub 117 n y 
C21 H21 CEI sing 118 n n 
C22 O25 CEI sing 119 n n 
C22 C23 CEI sing 120 n y 
O25 H25 CEI sing 121 n n 
C23 C24 CEI doub 122 n y 
C23 H23 CEI sing 123 n n 
C24 H24 CEI sing 124 n n 
#
_atom_sites.entry_id                     8S1L 
_atom_sites.fract_transf_matrix[1][1]    0.010424 
_atom_sites.fract_transf_matrix[1][2]    0.006018 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012036 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0028 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 CEI C 1 401 401 CEI CEI . 
J 3 CEI D 1 401 401 CEI CEI . 
K 3 CEI G 1 401 401 CEI CEI . 
L 3 CEI H 1 401 401 CEI CEI . 
M 4 HOH A 1 301 90 HOH HOH . 
M 4 HOH A 2 302 41 HOH HOH . 
M 4 HOH A 3 303 36 HOH HOH . 
M 4 HOH A 4 304 89 HOH HOH . 
M 4 HOH A 5 305 20 HOH HOH . 
M 4 HOH A 6 306 73 HOH HOH . 
M 4 HOH A 7 307 9 HOH HOH . 
N 4 HOH B 1 301 78 HOH HOH . 
N 4 HOH B 2 302 92 HOH HOH . 
N 4 HOH B 3 303 22 HOH HOH . 
N 4 HOH B 4 304 93 HOH HOH . 
N 4 HOH B 5 305 67 HOH HOH . 
N 4 HOH B 6 306 25 HOH HOH . 
N 4 HOH B 7 307 55 HOH HOH . 
N 4 HOH B 8 308 54 HOH HOH . 
N 4 HOH B 9 309 35 HOH HOH . 
N 4 HOH B 10 310 17 HOH HOH . 
O 4 HOH C 1 501 14 HOH HOH . 
O 4 HOH C 2 502 34 HOH HOH . 
O 4 HOH C 3 503 71 HOH HOH . 
O 4 HOH C 4 504 64 HOH HOH . 
O 4 HOH C 5 505 32 HOH HOH . 
O 4 HOH C 6 506 48 HOH HOH . 
O 4 HOH C 7 507 6 HOH HOH . 
O 4 HOH C 8 508 75 HOH HOH . 
O 4 HOH C 9 509 79 HOH HOH . 
O 4 HOH C 10 510 4 HOH HOH . 
O 4 HOH C 11 511 63 HOH HOH . 
O 4 HOH C 12 512 5 HOH HOH . 
O 4 HOH C 13 513 65 HOH HOH . 
O 4 HOH C 14 514 8 HOH HOH . 
O 4 HOH C 15 515 69 HOH HOH . 
O 4 HOH C 16 516 2 HOH HOH . 
O 4 HOH C 17 517 49 HOH HOH . 
O 4 HOH C 18 518 30 HOH HOH . 
O 4 HOH C 19 519 3 HOH HOH . 
O 4 HOH C 20 520 83 HOH HOH . 
O 4 HOH C 21 521 85 HOH HOH . 
O 4 HOH C 22 522 51 HOH HOH . 
O 4 HOH C 23 523 29 HOH HOH . 
P 4 HOH D 1 501 60 HOH HOH . 
P 4 HOH D 2 502 15 HOH HOH . 
P 4 HOH D 3 503 21 HOH HOH . 
P 4 HOH D 4 504 82 HOH HOH . 
P 4 HOH D 5 505 58 HOH HOH . 
P 4 HOH D 6 506 76 HOH HOH . 
P 4 HOH D 7 507 37 HOH HOH . 
P 4 HOH D 8 508 10 HOH HOH . 
P 4 HOH D 9 509 42 HOH HOH . 
P 4 HOH D 10 510 13 HOH HOH . 
P 4 HOH D 11 511 66 HOH HOH . 
P 4 HOH D 12 512 57 HOH HOH . 
Q 4 HOH E 1 301 74 HOH HOH . 
Q 4 HOH E 2 302 33 HOH HOH . 
Q 4 HOH E 3 303 59 HOH HOH . 
R 4 HOH F 1 301 28 HOH HOH . 
R 4 HOH F 2 302 46 HOH HOH . 
R 4 HOH F 3 303 50 HOH HOH . 
R 4 HOH F 4 304 45 HOH HOH . 
R 4 HOH F 5 305 84 HOH HOH . 
R 4 HOH F 6 306 61 HOH HOH . 
S 4 HOH G 1 501 72 HOH HOH . 
S 4 HOH G 2 502 44 HOH HOH . 
S 4 HOH G 3 503 52 HOH HOH . 
S 4 HOH G 4 504 31 HOH HOH . 
S 4 HOH G 5 505 80 HOH HOH . 
S 4 HOH G 6 506 27 HOH HOH . 
S 4 HOH G 7 507 87 HOH HOH . 
S 4 HOH G 8 508 62 HOH HOH . 
S 4 HOH G 9 509 68 HOH HOH . 
S 4 HOH G 10 510 26 HOH HOH . 
S 4 HOH G 11 511 91 HOH HOH . 
T 4 HOH H 1 501 81 HOH HOH . 
T 4 HOH H 2 502 1 HOH HOH . 
T 4 HOH H 3 503 88 HOH HOH . 
T 4 HOH H 4 504 40 HOH HOH . 
T 4 HOH H 5 505 11 HOH HOH . 
T 4 HOH H 6 506 19 HOH HOH . 
T 4 HOH H 7 507 38 HOH HOH . 
T 4 HOH H 8 508 18 HOH HOH . 
T 4 HOH H 9 509 53 HOH HOH . 
T 4 HOH H 10 510 24 HOH HOH . 
T 4 HOH H 11 511 12 HOH HOH . 
T 4 HOH H 12 512 47 HOH HOH . 
T 4 HOH H 13 513 39 HOH HOH . 
T 4 HOH H 14 514 70 HOH HOH . 
T 4 HOH H 15 515 86 HOH HOH . 
T 4 HOH H 16 516 7 HOH HOH . 
T 4 HOH H 17 517 77 HOH HOH . 
T 4 HOH H 18 518 56 HOH HOH . 
T 4 HOH H 19 519 43 HOH HOH . 
T 4 HOH H 20 520 16 HOH HOH . 
T 4 HOH H 21 521 23 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O33 CEI . . . J 3 12.979 -60.443 85.36 1 83.89 ? O33 CEI 401 D 1 
HETATM 2 C C2 CEI . . . J 3 12.85 -61.579 85.052 1 82.9 ? C2 CEI 401 D 1 
HETATM 3 C C10 CEI . . . J 3 13.562 -62.729 85.717 1 87.28 ? C10 CEI 401 D 1 
HETATM 4 C C11 CEI . . . J 3 14.594 -63.285 84.719 1 87.42 ? C11 CEI 401 D 1 
HETATM 5 C C12 CEI . . . J 3 15.489 -62.421 84.082 1 81.81 ? C12 CEI 401 D 1 
HETATM 6 C C13 CEI . . . J 3 16.442 -62.904 83.199 1 69.24 ? C13 CEI 401 D 1 
HETATM 7 C C14 CEI . . . J 3 16.493 -64.273 82.962 1 79.33 ? C14 CEI 401 D 1 
HETATM 8 O O17 CEI . . . J 3 17.444 -64.793 82.078 1 90.31 ? O17 CEI 401 D 1 
HETATM 9 C C15 CEI . . . J 3 15.611 -65.148 83.589 1 82.37 ? C15 CEI 401 D 1 
HETATM 10 C C16 CEI . . . J 3 14.653 -64.652 84.46 1 87.2 ? C16 CEI 401 D 1 
HETATM 11 N N1 CEI . . . J 3 12.004 -62.054 84.007 1 87.11 ? N1 CEI 401 D 1 
HETATM 12 C C9 CEI . . . J 3 11.231 -61.289 83.075 1 85.41 ? C9 CEI 401 D 1 
HETATM 13 C C8 CEI . . . J 3 10.062 -61.881 82.692 1 81.93 ? C8 CEI 401 D 1 
HETATM 14 C C26 CEI . . . J 3 9.741 -63.211 83.39 1 79.16 ? C26 CEI 401 D 1 
HETATM 15 C C27 CEI . . . J 3 8.232 -63.387 83.405 1 105.69 ? C27 CEI 401 D 1 
HETATM 16 C C28 CEI . . . J 3 7.484 -63.006 84.512 1 110.8 ? C28 CEI 401 D 1 
HETATM 17 C C29 CEI . . . J 3 6.105 -63.17 84.487 1 113.82 ? C29 CEI 401 D 1 
HETATM 18 C C30 CEI . . . J 3 5.481 -63.697 83.365 1 118.93 ? C30 CEI 401 D 1 
HETATM 19 C C31 CEI . . . J 3 6.231 -64.077 82.26 1 121.99 ? C31 CEI 401 D 1 
HETATM 20 C C32 CEI . . . J 3 7.606 -63.908 82.281 1 119.46 ? C32 CEI 401 D 1 
HETATM 21 N N7 CEI . . . J 3 9.307 -61.279 81.77 1 84.16 ? N7 CEI 401 D 1 
HETATM 22 C C6 CEI . . . J 3 9.746 -60.138 81.237 1 76.41 ? C6 CEI 401 D 1 
HETATM 23 C C5 CEI . . . J 3 10.942 -59.557 81.636 1 83.78 ? C5 CEI 401 D 1 
HETATM 24 N N4 CEI . . . J 3 11.692 -60.17 82.542 1 85.19 ? N4 CEI 401 D 1 
HETATM 25 C C19 CEI . . . J 3 8.896 -59.422 80.202 1 69.78 ? C19 CEI 401 D 1 
HETATM 26 C C20 CEI . . . J 3 7.846 -60.12 79.625 1 69.51 ? C20 CEI 401 D 1 
HETATM 27 C C21 CEI . . . J 3 7.026 -59.505 78.699 1 58.66 ? C21 CEI 401 D 1 
HETATM 28 C C22 CEI . . . J 3 7.261 -58.187 78.35 1 63.82 ? C22 CEI 401 D 1 
HETATM 29 O O25 CEI . . . J 3 6.434 -57.568 77.395 1 75.2 ? O25 CEI 401 D 1 
HETATM 30 C C23 CEI . . . J 3 8.324 -57.494 78.927 1 60.87 ? C23 CEI 401 D 1 
HETATM 31 C C24 CEI . . . J 3 9.161 -58.105 79.855 1 59.37 ? C24 CEI 401 D 1 
#
_model_server_stats.io_time_ms              64 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           251 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#