data_8S1M # _model_server_result.job_id 6HM8PNVyszz3K8YYZz7hxA _model_server_result.datetime_utc '2024-10-13 17:12:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8s1m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 8S1M # _exptl.entry_id 8S1M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8S1M _cell.length_a 101.28 _cell.length_b 101.28 _cell.length_c 101.28 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8S1M _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall 'I 2 2 3' _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 8S1M _atom_sites.fract_transf_matrix[1][1] 0.009874 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009874 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009874 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 201 201 CL CL . C 3 GOL A 1 202 211 GOL GOL . D 4 HOH A 1 301 11 HOH HOH . D 4 HOH A 2 302 24 HOH HOH . D 4 HOH A 3 303 22 HOH HOH . D 4 HOH A 4 304 17 HOH HOH . D 4 HOH A 5 305 3 HOH HOH . D 4 HOH A 6 306 18 HOH HOH . D 4 HOH A 7 307 9 HOH HOH . D 4 HOH A 8 308 4 HOH HOH . D 4 HOH A 9 309 13 HOH HOH . D 4 HOH A 10 310 5 HOH HOH . D 4 HOH A 11 311 10 HOH HOH . D 4 HOH A 12 312 16 HOH HOH . D 4 HOH A 13 313 15 HOH HOH . D 4 HOH A 14 314 21 HOH HOH . D 4 HOH A 15 315 1 HOH HOH . D 4 HOH A 16 316 2 HOH HOH . D 4 HOH A 17 317 6 HOH HOH . D 4 HOH A 18 318 7 HOH HOH . D 4 HOH A 19 319 12 HOH HOH . D 4 HOH A 20 320 23 HOH HOH . D 4 HOH A 21 321 25 HOH HOH . D 4 HOH A 22 322 26 HOH HOH . D 4 HOH A 23 323 20 HOH HOH . D 4 HOH A 24 324 19 HOH HOH . D 4 HOH A 25 325 14 HOH HOH . D 4 HOH A 26 326 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 33.255 25.519 18.86 1 82.34 ? C1 GOL 202 A 1 HETATM 2 O O1 GOL . . . C 3 32.237 26.45 18.495 1 71.47 ? O1 GOL 202 A 1 HETATM 3 C C2 GOL . . . C 3 32.881 24.744 20.106 1 80 ? C2 GOL 202 A 1 HETATM 4 O O2 GOL . . . C 3 31.672 24.017 19.889 1 84.51 ? O2 GOL 202 A 1 HETATM 5 C C3 GOL . . . C 3 33.977 23.821 20.597 1 76.28 ? C3 GOL 202 A 1 HETATM 6 O O3 GOL . . . C 3 34.35 22.869 19.603 1 91.06 ? O3 GOL 202 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #