data_8S2C # _model_server_result.job_id IvHMCTO0b6yMr0PO1ehVLQ _model_server_result.datetime_utc '2025-09-04 21:42:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8s2c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":101}' # _entry.id 8S2C # _exptl.entry_id 8S2C _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 188.264 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3~{R})-3-oxidanyldecanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 1 A LEU 2 1_555 A N DGL 2 A DGL 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.304 ? covale ? covale2 A N LEU 1 A LEU 2 1_555 B C IG8 . A IG8 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.367 ? covale ? covale3 A C DGL 2 A DGL 3 1_555 A N 2TL 3 A 2TL 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale4 A C 2TL 3 A 2TL 4 1_555 A N DVA 4 A DVA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.383 ? covale ? covale5 A OG1 2TL 3 A 2TL 4 1_555 A C ILE 9 A ILE 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale6 A C DVA 4 A DVA 5 1_555 A N LEU 5 A LEU 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale7 A C LEU 5 A LEU 6 1_555 A N DSN 6 A DSN 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale8 A C DSN 6 A DSN 7 1_555 A N LEU 7 A LEU 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale9 A C LEU 7 A LEU 8 1_555 A N DSN 8 A DSN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale10 A C DSN 8 A DSN 9 1_555 A N ILE 9 A ILE 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.292 ? # _chem_comp.formula 'C10 H20 O3' _chem_comp.formula_weight 188.264 _chem_comp.id IG8 _chem_comp.mon_nstd_flag . _chem_comp.name '(3~{R})-3-oxidanyldecanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OG1 CB IG8 sing 66 n n C CA IG8 sing 67 n n C O IG8 doub 68 n n CA CB IG8 sing 69 n n CB CG2 IG8 sing 70 n n CG2 CD IG8 sing 71 n n CD CE IG8 sing 72 n n CE CZ IG8 sing 73 n n CZ CH IG8 sing 74 n n CH CT IG8 sing 75 n n CT CI IG8 sing 76 n n C O1 IG8 sing 77 n n CA HA1 IG8 sing 78 n n CA HA2 IG8 sing 79 n n CB HB IG8 sing 80 n n CG2 HG21 IG8 sing 81 n n CG2 HG22 IG8 sing 82 n n OG1 HG1 IG8 sing 83 n n CD HD1 IG8 sing 84 n n CD HD2 IG8 sing 85 n n CE HE1 IG8 sing 86 n n CE HE2 IG8 sing 87 n n CZ HZ1 IG8 sing 88 n n CZ HZ2 IG8 sing 89 n n CH HH1 IG8 sing 90 n n CH HH2 IG8 sing 91 n n CI HI2 IG8 sing 92 n n CI HI3 IG8 sing 93 n n CI HI1 IG8 sing 94 n n CT HT1 IG8 sing 95 n n CT HT2 IG8 sing 96 n n O1 H1 IG8 sing 97 n n # _atom_sites.entry_id 8S2C _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id IG8 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id IG8 _pdbx_nonpoly_scheme.auth_mon_id IG8 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CA IG8 . . . B 2 0.368 4.036 -2.236 1 0 ? CA IG8 101 A 1 HETATM 2 C C IG8 . . . B 2 1.195 3.139 -1.357 1 0 ? C IG8 101 A 1 HETATM 3 O O IG8 . . . B 2 0.774 2.085 -0.906 1 0 ? O IG8 101 A 1 HETATM 4 C CB IG8 . . . B 2 -1.16 3.766 -2.025 1 0 ? CB IG8 101 A 1 HETATM 5 C CG2 IG8 . . . B 2 -1.829 4.878 -1.17 1 0 ? CG2 IG8 101 A 1 HETATM 6 O OG1 IG8 . . . B 2 -1.71 3.829 -3.278 1 0 ? OG1 IG8 101 A 1 HETATM 7 C CD IG8 . . . B 2 -1.866 4.549 0.312 1 0 ? CD IG8 101 A 1 HETATM 8 C CE IG8 . . . B 2 -2.797 5.533 1.116 1 0 ? CE IG8 101 A 1 HETATM 9 C CZ IG8 . . . B 2 -2.752 5.33 2.589 1 0 ? CZ IG8 101 A 1 HETATM 10 C CH IG8 . . . B 2 -3.988 5.968 3.225 1 0 ? CH IG8 101 A 1 HETATM 11 C CI IG8 . . . B 2 -4.569 4.448 5.207 1 0 ? CI IG8 101 A 1 HETATM 12 C CT IG8 . . . B 2 -4.979 4.923 3.757 1 0 ? CT IG8 101 A 1 HETATM 13 H HA1 IG8 . . . B 2 0.605 3.557 -3.188 1 0 ? HA1 IG8 101 A 1 HETATM 14 H HA2 IG8 . . . B 2 0.692 5.059 -2.436 1 0 ? HA2 IG8 101 A 1 HETATM 15 H HB IG8 . . . B 2 -1.344 2.746 -1.669 1 0 ? HB IG8 101 A 1 HETATM 16 H HG21 IG8 . . . B 2 -2.883 4.92 -1.456 1 0 ? HG21 IG8 101 A 1 HETATM 17 H HG22 IG8 . . . B 2 -1.47 5.894 -1.35 1 0 ? HG22 IG8 101 A 1 HETATM 18 H HG1 IG8 . . . B 2 -2.645 3.592 -3.146 1 0 ? HG1 IG8 101 A 1 HETATM 19 H HD1 IG8 . . . B 2 -0.859 4.545 0.733 1 0 ? HD1 IG8 101 A 1 HETATM 20 H HD2 IG8 . . . B 2 -2.175 3.503 0.343 1 0 ? HD2 IG8 101 A 1 HETATM 21 H HE1 IG8 . . . B 2 -3.831 5.349 0.818 1 0 ? HE1 IG8 101 A 1 HETATM 22 H HE2 IG8 . . . B 2 -2.621 6.54 0.731 1 0 ? HE2 IG8 101 A 1 HETATM 23 H HZ1 IG8 . . . B 2 -1.877 5.885 2.933 1 0 ? HZ1 IG8 101 A 1 HETATM 24 H HZ2 IG8 . . . B 2 -2.657 4.285 2.893 1 0 ? HZ2 IG8 101 A 1 HETATM 25 H HH1 IG8 . . . B 2 -4.625 6.542 2.549 1 0 ? HH1 IG8 101 A 1 HETATM 26 H HH2 IG8 . . . B 2 -3.685 6.626 4.043 1 0 ? HH2 IG8 101 A 1 HETATM 27 H HI2 IG8 . . . B 2 -3.758 3.751 4.98 1 0 ? HI2 IG8 101 A 1 HETATM 28 H HI3 IG8 . . . B 2 -5.367 3.832 5.625 1 0 ? HI3 IG8 101 A 1 HETATM 29 H HI1 IG8 . . . B 2 -4.09 5.067 5.969 1 0 ? HI1 IG8 101 A 1 HETATM 30 H HT1 IG8 . . . B 2 -4.872 4.044 3.117 1 0 ? HT1 IG8 101 A 1 HETATM 31 H HT2 IG8 . . . B 2 -5.942 5.439 3.721 1 0 ? HT2 IG8 101 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 4416 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 31 #