data_8S2W # _model_server_result.job_id 7imM2TAzqchl37Ljgb-fAw _model_server_result.datetime_utc '2025-01-11 11:55:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8s2w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":301}' # _entry.id 8S2W # _exptl.entry_id 8S2W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8S2W _cell.length_a 177.9 _cell.length_b 177.9 _cell.length_c 117.3 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8S2W _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 8S2W _atom_sites.fract_transf_matrix[1][1] 0.005621 _atom_sites.fract_transf_matrix[1][2] 0.003245 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006491 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008525 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PO4 A 1 301 5 PO4 PO4 . F 2 PO4 B 1 301 1 PO4 PO4 . G 2 PO4 C 1 301 2 PO4 PO4 . H 2 PO4 D 1 301 4 PO4 PO4 . I 3 HOH A 1 401 187 HOH HOH . I 3 HOH A 2 402 39 HOH HOH . I 3 HOH A 3 403 30 HOH HOH . I 3 HOH A 4 404 15 HOH HOH . I 3 HOH A 5 405 134 HOH HOH . I 3 HOH A 6 406 34 HOH HOH . I 3 HOH A 7 407 212 HOH HOH . I 3 HOH A 8 408 126 HOH HOH . I 3 HOH A 9 409 48 HOH HOH . I 3 HOH A 10 410 164 HOH HOH . I 3 HOH A 11 411 167 HOH HOH . I 3 HOH A 12 412 72 HOH HOH . I 3 HOH A 13 413 41 HOH HOH . I 3 HOH A 14 414 53 HOH HOH . I 3 HOH A 15 415 113 HOH HOH . I 3 HOH A 16 416 16 HOH HOH . I 3 HOH A 17 417 152 HOH HOH . I 3 HOH A 18 418 56 HOH HOH . I 3 HOH A 19 419 82 HOH HOH . I 3 HOH A 20 420 94 HOH HOH . I 3 HOH A 21 421 143 HOH HOH . I 3 HOH A 22 422 81 HOH HOH . I 3 HOH A 23 423 209 HOH HOH . I 3 HOH A 24 424 19 HOH HOH . I 3 HOH A 25 425 11 HOH HOH . I 3 HOH A 26 426 65 HOH HOH . I 3 HOH A 27 427 149 HOH HOH . I 3 HOH A 28 428 137 HOH HOH . I 3 HOH A 29 429 23 HOH HOH . I 3 HOH A 30 430 60 HOH HOH . I 3 HOH A 31 431 96 HOH HOH . I 3 HOH A 32 432 17 HOH HOH . I 3 HOH A 33 433 112 HOH HOH . I 3 HOH A 34 434 75 HOH HOH . I 3 HOH A 35 435 210 HOH HOH . I 3 HOH A 36 436 205 HOH HOH . I 3 HOH A 37 437 146 HOH HOH . I 3 HOH A 38 438 131 HOH HOH . I 3 HOH A 39 439 107 HOH HOH . I 3 HOH A 40 440 138 HOH HOH . I 3 HOH A 41 441 123 HOH HOH . I 3 HOH A 42 442 118 HOH HOH . I 3 HOH A 43 443 197 HOH HOH . I 3 HOH A 44 444 87 HOH HOH . I 3 HOH A 45 445 168 HOH HOH . I 3 HOH A 46 446 103 HOH HOH . I 3 HOH A 47 447 202 HOH HOH . I 3 HOH A 48 448 157 HOH HOH . J 3 HOH B 1 401 194 HOH HOH . J 3 HOH B 2 402 29 HOH HOH . J 3 HOH B 3 403 83 HOH HOH . J 3 HOH B 4 404 91 HOH HOH . J 3 HOH B 5 405 55 HOH HOH . J 3 HOH B 6 406 26 HOH HOH . J 3 HOH B 7 407 50 HOH HOH . J 3 HOH B 8 408 49 HOH HOH . J 3 HOH B 9 409 35 HOH HOH . J 3 HOH B 10 410 31 HOH HOH . J 3 HOH B 11 411 38 HOH HOH . J 3 HOH B 12 412 89 HOH HOH . J 3 HOH B 13 413 76 HOH HOH . J 3 HOH B 14 414 10 HOH HOH . J 3 HOH B 15 415 98 HOH HOH . J 3 HOH B 16 416 80 HOH HOH . J 3 HOH B 17 417 95 HOH HOH . J 3 HOH B 18 418 9 HOH HOH . J 3 HOH B 19 419 150 HOH HOH . J 3 HOH B 20 420 213 HOH HOH . J 3 HOH B 21 421 73 HOH HOH . J 3 HOH B 22 422 154 HOH HOH . J 3 HOH B 23 423 4 HOH HOH . J 3 HOH B 24 424 18 HOH HOH . J 3 HOH B 25 425 148 HOH HOH . J 3 HOH B 26 426 136 HOH HOH . J 3 HOH B 27 427 66 HOH HOH . J 3 HOH B 28 428 97 HOH HOH . J 3 HOH B 29 429 111 HOH HOH . J 3 HOH B 30 430 120 HOH HOH . J 3 HOH B 31 431 145 HOH HOH . J 3 HOH B 32 432 105 HOH HOH . J 3 HOH B 33 433 2 HOH HOH . J 3 HOH B 34 434 101 HOH HOH . J 3 HOH B 35 435 100 HOH HOH . J 3 HOH B 36 436 117 HOH HOH . J 3 HOH B 37 437 174 HOH HOH . J 3 HOH B 38 438 88 HOH HOH . J 3 HOH B 39 439 206 HOH HOH . J 3 HOH B 40 440 158 HOH HOH . K 3 HOH C 1 401 84 HOH HOH . K 3 HOH C 2 402 37 HOH HOH . K 3 HOH C 3 403 28 HOH HOH . K 3 HOH C 4 404 166 HOH HOH . K 3 HOH C 5 405 6 HOH HOH . K 3 HOH C 6 406 74 HOH HOH . K 3 HOH C 7 407 36 HOH HOH . K 3 HOH C 8 408 195 HOH HOH . K 3 HOH C 9 409 127 HOH HOH . K 3 HOH C 10 410 153 HOH HOH . K 3 HOH C 11 411 51 HOH HOH . K 3 HOH C 12 412 92 HOH HOH . K 3 HOH C 13 413 45 HOH HOH . K 3 HOH C 14 414 133 HOH HOH . K 3 HOH C 15 415 46 HOH HOH . K 3 HOH C 16 416 25 HOH HOH . K 3 HOH C 17 417 151 HOH HOH . K 3 HOH C 18 418 77 HOH HOH . K 3 HOH C 19 419 121 HOH HOH . K 3 HOH C 20 420 21 HOH HOH . K 3 HOH C 21 421 33 HOH HOH . K 3 HOH C 22 422 211 HOH HOH . K 3 HOH C 23 423 59 HOH HOH . K 3 HOH C 24 424 54 HOH HOH . K 3 HOH C 25 425 70 HOH HOH . K 3 HOH C 26 426 43 HOH HOH . K 3 HOH C 27 427 8 HOH HOH . K 3 HOH C 28 428 116 HOH HOH . K 3 HOH C 29 429 119 HOH HOH . K 3 HOH C 30 430 44 HOH HOH . K 3 HOH C 31 431 106 HOH HOH . K 3 HOH C 32 432 132 HOH HOH . K 3 HOH C 33 433 32 HOH HOH . K 3 HOH C 34 434 79 HOH HOH . K 3 HOH C 35 435 141 HOH HOH . K 3 HOH C 36 436 108 HOH HOH . K 3 HOH C 37 437 12 HOH HOH . K 3 HOH C 38 438 102 HOH HOH . K 3 HOH C 39 439 159 HOH HOH . K 3 HOH C 40 440 169 HOH HOH . K 3 HOH C 41 441 139 HOH HOH . K 3 HOH C 42 442 110 HOH HOH . K 3 HOH C 43 443 7 HOH HOH . K 3 HOH C 44 444 186 HOH HOH . K 3 HOH C 45 445 184 HOH HOH . K 3 HOH C 46 446 144 HOH HOH . K 3 HOH C 47 447 128 HOH HOH . L 3 HOH D 1 401 5 HOH HOH . L 3 HOH D 2 402 71 HOH HOH . L 3 HOH D 3 403 135 HOH HOH . L 3 HOH D 4 404 193 HOH HOH . L 3 HOH D 5 405 27 HOH HOH . L 3 HOH D 6 406 124 HOH HOH . L 3 HOH D 7 407 47 HOH HOH . L 3 HOH D 8 408 85 HOH HOH . L 3 HOH D 9 409 40 HOH HOH . L 3 HOH D 10 410 22 HOH HOH . L 3 HOH D 11 411 114 HOH HOH . L 3 HOH D 12 412 58 HOH HOH . L 3 HOH D 13 413 24 HOH HOH . L 3 HOH D 14 414 52 HOH HOH . L 3 HOH D 15 415 165 HOH HOH . L 3 HOH D 16 416 93 HOH HOH . L 3 HOH D 17 417 57 HOH HOH . L 3 HOH D 18 418 142 HOH HOH . L 3 HOH D 19 419 163 HOH HOH . L 3 HOH D 20 420 68 HOH HOH . L 3 HOH D 21 421 125 HOH HOH . L 3 HOH D 22 422 99 HOH HOH . L 3 HOH D 23 423 207 HOH HOH . L 3 HOH D 24 424 42 HOH HOH . L 3 HOH D 25 425 86 HOH HOH . L 3 HOH D 26 426 122 HOH HOH . L 3 HOH D 27 427 208 HOH HOH . L 3 HOH D 28 428 69 HOH HOH . L 3 HOH D 29 429 90 HOH HOH . L 3 HOH D 30 430 109 HOH HOH . L 3 HOH D 31 431 104 HOH HOH . L 3 HOH D 32 432 13 HOH HOH . L 3 HOH D 33 433 196 HOH HOH . L 3 HOH D 34 434 115 HOH HOH . L 3 HOH D 35 435 78 HOH HOH . L 3 HOH D 36 436 130 HOH HOH . L 3 HOH D 37 437 173 HOH HOH . L 3 HOH D 38 438 14 HOH HOH . L 3 HOH D 39 439 140 HOH HOH . L 3 HOH D 40 440 175 HOH HOH . L 3 HOH D 41 441 147 HOH HOH . L 3 HOH D 42 442 129 HOH HOH . L 3 HOH D 43 443 204 HOH HOH . L 3 HOH D 44 444 156 HOH HOH . L 3 HOH D 45 445 171 HOH HOH . L 3 HOH D 46 446 160 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . F 2 -13.892 -27.177 -49.497 1 99.68 ? P PO4 301 B 1 HETATM 2 O O1 PO4 . . . F 2 -13.214 -26.946 -50.875 1 80.17 ? O1 PO4 301 B 1 HETATM 3 O O2 PO4 . . . F 2 -15.404 -27.097 -49.658 1 87.71 ? O2 PO4 301 B 1 HETATM 4 O O3 PO4 . . . F 2 -13.585 -28.571 -48.934 1 71.2 ? O3 PO4 301 B 1 HETATM 5 O O4 PO4 . . . F 2 -13.382 -26.088 -48.521 1 91.53 ? O4 PO4 301 B 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #