data_8S4A
#
_model_server_result.job_id            n98tA8_fH5ixIWdobtb3cQ 
_model_server_result.datetime_utc      '2024-11-30 10:56:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8s4a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":201}' 
#
_entry.id    8S4A 
#
_exptl.entry_id    8S4A 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              218.255 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-[cyanomethyl(methyl)amino]-N-(6-methylpyridin-2-yl)ethanamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8S4A 
_cell.length_a            41.7 
_cell.length_b            64.46 
_cell.length_c            128.69 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8S4A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,F 1 1 
B,D,E,G 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C11 H14 N4 O' 
_chem_comp.formula_weight    218.255 
_chem_comp.id                AJO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-[cyanomethyl(methyl)amino]-N-(6-methylpyridin-2-yl)ethanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C16 N12 AJO sing 1 n n 
C13 N12 AJO sing 2 n n 
C13 C14 AJO sing 3 n n 
N12 C09 AJO sing 4 n n 
C14 N15 AJO trip 5 n n 
C09 C08 AJO sing 6 n n 
O10 C08 AJO doub 7 n n 
C08 N07 AJO sing 8 n n 
N07 C01 AJO sing 9 n n 
C01 C02 AJO doub 10 n y 
C01 N06 AJO sing 11 n y 
C02 C03 AJO sing 12 n y 
N06 C05 AJO doub 13 n y 
C03 C04 AJO doub 14 n y 
C05 C04 AJO sing 15 n y 
C05 C11 AJO sing 16 n n 
C13 H2 AJO sing 17 n n 
C13 H3 AJO sing 18 n n 
C02 H4 AJO sing 19 n n 
C03 H5 AJO sing 20 n n 
C04 H6 AJO sing 21 n n 
C09 H7 AJO sing 22 n n 
C09 H8 AJO sing 23 n n 
C11 H9 AJO sing 24 n n 
C11 H10 AJO sing 25 n n 
C11 H11 AJO sing 26 n n 
C16 H12 AJO sing 27 n n 
C16 H13 AJO sing 28 n n 
C16 H14 AJO sing 29 n n 
N07 H15 AJO sing 30 n n 
#
_atom_sites.entry_id                     8S4A 
_atom_sites.fract_transf_matrix[1][1]    0.023981 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015513 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007771 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 AJO A 1 201 201 AJO XXX . 
D 2 AJO B 1 201 201 AJO XXX . 
E 3 CL B 1 202 1 CL CL . 
F 4 HOH A 1 301 48 HOH HOH . 
F 4 HOH A 2 302 82 HOH HOH . 
F 4 HOH A 3 303 92 HOH HOH . 
F 4 HOH A 4 304 50 HOH HOH . 
F 4 HOH A 5 305 102 HOH HOH . 
F 4 HOH A 6 306 103 HOH HOH . 
F 4 HOH A 7 307 63 HOH HOH . 
F 4 HOH A 8 308 64 HOH HOH . 
F 4 HOH A 9 309 69 HOH HOH . 
F 4 HOH A 10 310 5 HOH HOH . 
F 4 HOH A 11 311 3 HOH HOH . 
F 4 HOH A 12 312 1 HOH HOH . 
F 4 HOH A 13 313 28 HOH HOH . 
F 4 HOH A 14 314 37 HOH HOH . 
F 4 HOH A 15 315 95 HOH HOH . 
F 4 HOH A 16 316 13 HOH HOH . 
F 4 HOH A 17 317 39 HOH HOH . 
F 4 HOH A 18 318 4 HOH HOH . 
F 4 HOH A 19 319 104 HOH HOH . 
F 4 HOH A 20 320 67 HOH HOH . 
F 4 HOH A 21 321 65 HOH HOH . 
F 4 HOH A 22 322 66 HOH HOH . 
F 4 HOH A 23 323 52 HOH HOH . 
F 4 HOH A 24 324 80 HOH HOH . 
F 4 HOH A 25 325 88 HOH HOH . 
F 4 HOH A 26 326 35 HOH HOH . 
F 4 HOH A 27 327 75 HOH HOH . 
F 4 HOH A 28 328 55 HOH HOH . 
F 4 HOH A 29 329 29 HOH HOH . 
F 4 HOH A 30 330 26 HOH HOH . 
F 4 HOH A 31 331 45 HOH HOH . 
F 4 HOH A 32 332 34 HOH HOH . 
F 4 HOH A 33 333 62 HOH HOH . 
F 4 HOH A 34 334 108 HOH HOH . 
F 4 HOH A 35 335 81 HOH HOH . 
F 4 HOH A 36 336 85 HOH HOH . 
F 4 HOH A 37 337 77 HOH HOH . 
F 4 HOH A 38 338 36 HOH HOH . 
F 4 HOH A 39 339 54 HOH HOH . 
F 4 HOH A 40 340 120 HOH HOH . 
F 4 HOH A 41 341 12 HOH HOH . 
F 4 HOH A 42 342 42 HOH HOH . 
F 4 HOH A 43 343 21 HOH HOH . 
F 4 HOH A 44 344 72 HOH HOH . 
F 4 HOH A 45 345 70 HOH HOH . 
F 4 HOH A 46 346 17 HOH HOH . 
F 4 HOH A 47 347 84 HOH HOH . 
F 4 HOH A 48 348 24 HOH HOH . 
F 4 HOH A 49 349 110 HOH HOH . 
F 4 HOH A 50 350 61 HOH HOH . 
F 4 HOH A 51 351 98 HOH HOH . 
F 4 HOH A 52 352 91 HOH HOH . 
F 4 HOH A 53 353 99 HOH HOH . 
F 4 HOH A 54 354 86 HOH HOH . 
F 4 HOH A 55 355 27 HOH HOH . 
F 4 HOH A 56 356 53 HOH HOH . 
F 4 HOH A 57 357 89 HOH HOH . 
F 4 HOH A 58 358 101 HOH HOH . 
F 4 HOH A 59 359 43 HOH HOH . 
F 4 HOH A 60 360 71 HOH HOH . 
F 4 HOH A 61 361 74 HOH HOH . 
F 4 HOH A 62 362 15 HOH HOH . 
F 4 HOH A 63 363 41 HOH HOH . 
F 4 HOH A 64 364 115 HOH HOH . 
F 4 HOH A 65 365 106 HOH HOH . 
F 4 HOH A 66 366 105 HOH HOH . 
F 4 HOH A 67 367 96 HOH HOH . 
F 4 HOH A 68 368 112 HOH HOH . 
F 4 HOH A 69 369 57 HOH HOH . 
F 4 HOH A 70 370 47 HOH HOH . 
G 4 HOH B 1 301 8 HOH HOH . 
G 4 HOH B 2 302 30 HOH HOH . 
G 4 HOH B 3 303 40 HOH HOH . 
G 4 HOH B 4 304 33 HOH HOH . 
G 4 HOH B 5 305 14 HOH HOH . 
G 4 HOH B 6 306 46 HOH HOH . 
G 4 HOH B 7 307 11 HOH HOH . 
G 4 HOH B 8 308 87 HOH HOH . 
G 4 HOH B 9 309 56 HOH HOH . 
G 4 HOH B 10 310 2 HOH HOH . 
G 4 HOH B 11 311 10 HOH HOH . 
G 4 HOH B 12 312 25 HOH HOH . 
G 4 HOH B 13 313 38 HOH HOH . 
G 4 HOH B 14 314 93 HOH HOH . 
G 4 HOH B 15 315 6 HOH HOH . 
G 4 HOH B 16 316 7 HOH HOH . 
G 4 HOH B 17 317 31 HOH HOH . 
G 4 HOH B 18 318 117 HOH HOH . 
G 4 HOH B 19 319 9 HOH HOH . 
G 4 HOH B 20 320 51 HOH HOH . 
G 4 HOH B 21 321 44 HOH HOH . 
G 4 HOH B 22 322 20 HOH HOH . 
G 4 HOH B 23 323 68 HOH HOH . 
G 4 HOH B 24 324 76 HOH HOH . 
G 4 HOH B 25 325 111 HOH HOH . 
G 4 HOH B 26 326 58 HOH HOH . 
G 4 HOH B 27 327 22 HOH HOH . 
G 4 HOH B 28 328 73 HOH HOH . 
G 4 HOH B 29 329 16 HOH HOH . 
G 4 HOH B 30 330 59 HOH HOH . 
G 4 HOH B 31 331 19 HOH HOH . 
G 4 HOH B 32 332 18 HOH HOH . 
G 4 HOH B 33 333 113 HOH HOH . 
G 4 HOH B 34 334 60 HOH HOH . 
G 4 HOH B 35 335 118 HOH HOH . 
G 4 HOH B 36 336 49 HOH HOH . 
G 4 HOH B 37 337 114 HOH HOH . 
G 4 HOH B 38 338 32 HOH HOH . 
G 4 HOH B 39 339 90 HOH HOH . 
G 4 HOH B 40 340 78 HOH HOH . 
G 4 HOH B 41 341 23 HOH HOH . 
G 4 HOH B 42 342 119 HOH HOH . 
G 4 HOH B 43 343 97 HOH HOH . 
G 4 HOH B 44 344 83 HOH HOH . 
G 4 HOH B 45 345 100 HOH HOH . 
G 4 HOH B 46 346 107 HOH HOH . 
G 4 HOH B 47 347 79 HOH HOH . 
G 4 HOH B 48 348 109 HOH HOH . 
G 4 HOH B 49 349 94 HOH HOH . 
G 4 HOH B 50 350 116 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N12 AJO . . . D 2 -16.36 -28.826 0.819 1 77.77 ? N12 AJO 201 B 1 
HETATM 2 C C13 AJO . . . D 2 -17.716 -29.329 0.633 1 73.49 ? C13 AJO 201 B 1 
HETATM 3 C C01 AJO . . . D 2 -13.331 -27.235 -2.709 1 55.98 ? C01 AJO 201 B 1 
HETATM 4 C C02 AJO . . . D 2 -12.165 -26.728 -2.128 1 44.19 ? C02 AJO 201 B 1 
HETATM 5 C C03 AJO . . . D 2 -11.373 -25.899 -2.899 1 54.84 ? C03 AJO 201 B 1 
HETATM 6 C C04 AJO . . . D 2 -11.752 -25.598 -4.196 1 68.74 ? C04 AJO 201 B 1 
HETATM 7 C C05 AJO . . . D 2 -12.933 -26.14 -4.699 1 68.94 ? C05 AJO 201 B 1 
HETATM 8 C C08 AJO . . . D 2 -14.592 -28.018 -0.73 1 72.68 ? C08 AJO 201 B 1 
HETATM 9 C C09 AJO . . . D 2 -15.455 -29.182 -0.275 1 63.51 ? C09 AJO 201 B 1 
HETATM 10 C C11 AJO . . . D 2 -13.42 -25.813 -6.079 1 43.9 ? C11 AJO 201 B 1 
HETATM 11 C C14 AJO . . . D 2 -18.393 -28.794 -0.561 1 77.7 ? C14 AJO 201 B 1 
HETATM 12 C C16 AJO . . . D 2 -15.812 -29.252 2.112 1 77.44 ? C16 AJO 201 B 1 
HETATM 13 N N06 AJO . . . D 2 -13.71 -26.954 -3.964 1 64.28 ? N06 AJO 201 B 1 
HETATM 14 N N07 AJO . . . D 2 -14.21 -28.083 -2.022 1 63.8 ? N07 AJO 201 B 1 
HETATM 15 N N15 AJO . . . D 2 -18.878 -28.372 -1.497 1 70.34 ? N15 AJO 201 B 1 
HETATM 16 O O10 AJO . . . D 2 -14.275 -27.117 0.04 1 80.35 ? O10 AJO 201 B 1 
#
_model_server_stats.io_time_ms              59 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           265 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           16 
#