data_8S4W # _model_server_result.job_id Bbr-W0wwaAOokvMdRkfqYw _model_server_result.datetime_utc '2025-07-26 10:35:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8s4w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1201}' # _entry.id 8S4W # _exptl.entry_id 8S4W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 381.425 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2~{R})-~{N}-[2-(4-~{tert}-butylphenyl)-4-oxidanylidene-3~{H}-quinazolin-8-yl]-2,3-bis(oxidanyl)propanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8S4W _cell.length_a 66.6 _cell.length_b 66.6 _cell.length_c 120.586 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8S4W _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 138 A CYS 1081 1_555 D ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc2 A ND1 HIS 141 A HIS 1084 1_555 D ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc3 A SG CYS 146 A CYS 1089 1_555 D ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc4 A SG CYS 149 A CYS 1092 1_555 D ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? # _chem_comp.formula 'C21 H23 N3 O4' _chem_comp.formula_weight 381.425 _chem_comp.id A1H44 _chem_comp.mon_nstd_flag . _chem_comp.name (2~{R})-~{N}-[2-(4-~{tert}-butylphenyl)-4-oxidanylidene-3~{H}-quinazolin-8-yl]-2,3-bis(oxidanyl)propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 A1H44 doub 1 n y C01 C06 A1H44 sing 2 n y C02 C03 A1H44 sing 3 n y C03 C04 A1H44 doub 4 n y C04 C05 A1H44 sing 5 n y C05 C06 A1H44 doub 6 n y N07 C08 A1H44 doub 7 n n C08 N09 A1H44 sing 8 n n N09 C10 A1H44 sing 9 n n C05 N07 A1H44 sing 10 n n C06 C10 A1H44 sing 11 n n C08 C11 A1H44 sing 12 n n C10 O12 A1H44 doub 13 n n C04 N13 A1H44 sing 14 n n C14 C15 A1H44 doub 15 n y C15 C16 A1H44 sing 16 n y C16 C17 A1H44 doub 17 n y C17 C18 A1H44 sing 18 n y C11 C14 A1H44 sing 19 n y C11 C18 A1H44 doub 20 n y C16 C19 A1H44 sing 21 n n C19 C20 A1H44 sing 22 n n C19 C21 A1H44 sing 23 n n C19 C22 A1H44 sing 24 n n N13 C23 A1H44 sing 25 n n C23 O24 A1H44 doub 26 n n C25 C23 A1H44 sing 27 n n C25 C26 A1H44 sing 28 n n C26 O27 A1H44 sing 29 n n C25 O28 A1H44 sing 30 n n C14 H141 A1H44 sing 31 n n C15 H151 A1H44 sing 32 n n C17 H171 A1H44 sing 33 n n C20 H202 A1H44 sing 34 n n C20 H201 A1H44 sing 35 n n C20 H203 A1H44 sing 36 n n C21 H211 A1H44 sing 37 n n C21 H212 A1H44 sing 38 n n C21 H213 A1H44 sing 39 n n C22 H223 A1H44 sing 40 n n C22 H222 A1H44 sing 41 n n C22 H221 A1H44 sing 42 n n C01 H011 A1H44 sing 43 n n C02 H021 A1H44 sing 44 n n C03 H031 A1H44 sing 45 n n C18 H181 A1H44 sing 46 n n C25 H251 A1H44 sing 47 n n C26 H261 A1H44 sing 48 n n C26 H262 A1H44 sing 49 n n N09 H091 A1H44 sing 50 n n N13 H131 A1H44 sing 51 n n O27 H271 A1H44 sing 52 n n O28 H281 A1H44 sing 53 n n # _atom_sites.entry_id 8S4W _atom_sites.fract_transf_matrix[1][1] 0.015015 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015015 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008293 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 A1H44 A 1 1201 1203 A1H44 365 . D 4 ZN A 1 1202 1 ZN ZN . E 5 SO4 A 1 1203 1 SO4 SO4 . F 5 SO4 A 1 1204 2 SO4 SO4 . G 6 HOH A 1 1301 37 HOH HOH . G 6 HOH A 2 1302 84 HOH HOH . G 6 HOH A 3 1303 32 HOH HOH . G 6 HOH A 4 1304 38 HOH HOH . G 6 HOH A 5 1305 68 HOH HOH . G 6 HOH A 6 1306 69 HOH HOH . G 6 HOH A 7 1307 86 HOH HOH . G 6 HOH A 8 1308 81 HOH HOH . G 6 HOH A 9 1309 65 HOH HOH . G 6 HOH A 10 1310 45 HOH HOH . G 6 HOH A 11 1311 78 HOH HOH . G 6 HOH A 12 1312 3 HOH HOH . G 6 HOH A 13 1313 34 HOH HOH . G 6 HOH A 14 1314 79 HOH HOH . G 6 HOH A 15 1315 72 HOH HOH . G 6 HOH A 16 1316 7 HOH HOH . G 6 HOH A 17 1317 21 HOH HOH . G 6 HOH A 18 1318 39 HOH HOH . G 6 HOH A 19 1319 4 HOH HOH . G 6 HOH A 20 1320 9 HOH HOH . G 6 HOH A 21 1321 31 HOH HOH . G 6 HOH A 22 1322 27 HOH HOH . G 6 HOH A 23 1323 40 HOH HOH . G 6 HOH A 24 1324 5 HOH HOH . G 6 HOH A 25 1325 23 HOH HOH . G 6 HOH A 26 1326 47 HOH HOH . G 6 HOH A 27 1327 71 HOH HOH . G 6 HOH A 28 1328 80 HOH HOH . G 6 HOH A 29 1329 19 HOH HOH . G 6 HOH A 30 1330 42 HOH HOH . G 6 HOH A 31 1331 43 HOH HOH . G 6 HOH A 32 1332 26 HOH HOH . G 6 HOH A 33 1333 48 HOH HOH . G 6 HOH A 34 1334 77 HOH HOH . G 6 HOH A 35 1335 20 HOH HOH . G 6 HOH A 36 1336 28 HOH HOH . G 6 HOH A 37 1337 58 HOH HOH . G 6 HOH A 38 1338 70 HOH HOH . G 6 HOH A 39 1339 17 HOH HOH . G 6 HOH A 40 1340 59 HOH HOH . G 6 HOH A 41 1341 22 HOH HOH . G 6 HOH A 42 1342 51 HOH HOH . G 6 HOH A 43 1343 46 HOH HOH . G 6 HOH A 44 1344 1 HOH HOH . G 6 HOH A 45 1345 30 HOH HOH . G 6 HOH A 46 1346 66 HOH HOH . G 6 HOH A 47 1347 54 HOH HOH . G 6 HOH A 48 1348 13 HOH HOH . G 6 HOH A 49 1349 67 HOH HOH . G 6 HOH A 50 1350 61 HOH HOH . G 6 HOH A 51 1351 16 HOH HOH . G 6 HOH A 52 1352 18 HOH HOH . G 6 HOH A 53 1353 8 HOH HOH . G 6 HOH A 54 1354 75 HOH HOH . G 6 HOH A 55 1355 10 HOH HOH . G 6 HOH A 56 1356 85 HOH HOH . G 6 HOH A 57 1357 12 HOH HOH . G 6 HOH A 58 1358 14 HOH HOH . G 6 HOH A 59 1359 15 HOH HOH . G 6 HOH A 60 1360 25 HOH HOH . G 6 HOH A 61 1361 64 HOH HOH . G 6 HOH A 62 1362 53 HOH HOH . G 6 HOH A 63 1363 44 HOH HOH . G 6 HOH A 64 1364 60 HOH HOH . G 6 HOH A 65 1365 73 HOH HOH . G 6 HOH A 66 1366 24 HOH HOH . G 6 HOH A 67 1367 57 HOH HOH . G 6 HOH A 68 1368 76 HOH HOH . G 6 HOH A 69 1369 63 HOH HOH . G 6 HOH A 70 1370 41 HOH HOH . G 6 HOH A 71 1371 52 HOH HOH . G 6 HOH A 72 1372 50 HOH HOH . H 6 HOH E 1 1201 82 HOH HOH . H 6 HOH E 2 1202 83 HOH HOH . H 6 HOH E 3 1203 33 HOH HOH . H 6 HOH E 4 1204 55 HOH HOH . H 6 HOH E 5 1205 49 HOH HOH . H 6 HOH E 6 1206 6 HOH HOH . H 6 HOH E 7 1207 11 HOH HOH . H 6 HOH E 8 1208 62 HOH HOH . H 6 HOH E 9 1209 29 HOH HOH . H 6 HOH E 10 1210 2 HOH HOH . H 6 HOH E 11 1211 74 HOH HOH . H 6 HOH E 12 1212 56 HOH HOH . H 6 HOH E 13 1213 35 HOH HOH . H 6 HOH E 14 1214 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 A1H44 . . . C 3 12.307 -2.458 14.739 1 43.01 ? C10 A1H44 1201 A 1 HETATM 2 C C11 A1H44 . . . C 3 11.901 -3.259 11.13 1 47.63 ? C11 A1H44 1201 A 1 HETATM 3 C C14 A1H44 . . . C 3 12.016 -4.395 10.363 1 45.97 ? C14 A1H44 1201 A 1 HETATM 4 C C15 A1H44 . . . C 3 11.766 -4.301 9.002 1 44.84 ? C15 A1H44 1201 A 1 HETATM 5 C C16 A1H44 . . . C 3 11.359 -3.101 8.443 1 48.09 ? C16 A1H44 1201 A 1 HETATM 6 C C17 A1H44 . . . C 3 11.209 -1.971 9.234 1 42.47 ? C17 A1H44 1201 A 1 HETATM 7 C C20 A1H44 . . . C 3 12.364 -2.447 6.291 1 48.01 ? C20 A1H44 1201 A 1 HETATM 8 C C21 A1H44 . . . C 3 10.948 -4.381 6.327 1 45.14 ? C21 A1H44 1201 A 1 HETATM 9 C C22 A1H44 . . . C 3 9.934 -2.152 6.565 1 50.43 ? C22 A1H44 1201 A 1 HETATM 10 C C01 A1H44 . . . C 3 12.527 -3.997 16.594 1 39.2 ? C01 A1H44 1201 A 1 HETATM 11 C C02 A1H44 . . . C 3 12.619 -5.295 17.086 1 40.83 ? C02 A1H44 1201 A 1 HETATM 12 C C03 A1H44 . . . C 3 12.59 -6.372 16.244 1 36.66 ? C03 A1H44 1201 A 1 HETATM 13 C C04 A1H44 . . . C 3 12.423 -6.134 14.909 1 42.41 ? C04 A1H44 1201 A 1 HETATM 14 C C05 A1H44 . . . C 3 12.359 -4.822 14.42 1 41.69 ? C05 A1H44 1201 A 1 HETATM 15 C C06 A1H44 . . . C 3 12.408 -3.744 15.238 1 40.27 ? C06 A1H44 1201 A 1 HETATM 16 C C08 A1H44 . . . C 3 12.117 -3.387 12.635 1 48.67 ? C08 A1H44 1201 A 1 HETATM 17 C C18 A1H44 . . . C 3 11.448 -2.063 10.595 1 44.42 ? C18 A1H44 1201 A 1 HETATM 18 C C19 A1H44 . . . C 3 11.12 -3.02 6.917 1 44.36 ? C19 A1H44 1201 A 1 HETATM 19 C C23 A1H44 . . . C 3 12.877 -8.525 14.158 1 52.95 ? C23 A1H44 1201 A 1 HETATM 20 C C25 A1H44 . . . C 3 12.917 -9.445 12.968 1 53.57 ? C25 A1H44 1201 A 1 HETATM 21 C C26 A1H44 . . . C 3 11.64 -10.233 12.843 1 60.95 ? C26 A1H44 1201 A 1 HETATM 22 N N07 A1H44 . . . C 3 12.212 -4.641 13.128 1 38.44 ? N07 A1H44 1201 A 1 HETATM 23 N N09 A1H44 . . . C 3 12.151 -2.3 13.431 1 35.71 ? N09 A1H44 1201 A 1 HETATM 24 N N13 A1H44 . . . C 3 12.425 -7.165 13.92 1 45.28 ? N13 A1H44 1201 A 1 HETATM 25 O O12 A1H44 . . . C 3 12.359 -1.478 15.428 1 34.55 ? O12 A1H44 1201 A 1 HETATM 26 O O24 A1H44 . . . C 3 13.196 -8.935 15.218 1 54.17 ? O24 A1H44 1201 A 1 HETATM 27 O O27 A1H44 . . . C 3 11.987 -11.29 11.999 1 47.06 ? O27 A1H44 1201 A 1 HETATM 28 O O28 A1H44 . . . C 3 13.071 -8.695 11.792 1 47.93 ? O28 A1H44 1201 A 1 HETATM 29 H H141 A1H44 . . . C 3 12.296 -5.341 10.811 1 55.18 ? H141 A1H44 1201 A 1 HETATM 30 H H151 A1H44 . . . C 3 11.889 -5.174 8.37 1 53.82 ? H151 A1H44 1201 A 1 HETATM 31 H H171 A1H44 . . . C 3 10.91 -1.029 8.793 1 50.98 ? H171 A1H44 1201 A 1 HETATM 32 H H202 A1H44 . . . C 3 13.206 -3.104 6.491 1 57.63 ? H202 A1H44 1201 A 1 HETATM 33 H H201 A1H44 . . . C 3 12.562 -1.466 6.712 1 57.63 ? H201 A1H44 1201 A 1 HETATM 34 H H203 A1H44 . . . C 3 12.221 -2.359 5.218 1 57.63 ? H203 A1H44 1201 A 1 HETATM 35 H H211 A1H44 . . . C 3 11.896 -4.91 6.355 1 54.19 ? H211 A1H44 1201 A 1 HETATM 36 H H212 A1H44 . . . C 3 10.614 -4.289 5.296 1 54.19 ? H212 A1H44 1201 A 1 HETATM 37 H H213 A1H44 . . . C 3 10.207 -4.933 6.9 1 54.19 ? H213 A1H44 1201 A 1 HETATM 38 H H223 A1H44 . . . C 3 10.174 -1.109 6.774 1 60.53 ? H223 A1H44 1201 A 1 HETATM 39 H H222 A1H44 . . . C 3 9.073 -2.453 7.162 1 60.53 ? H222 A1H44 1201 A 1 HETATM 40 H H221 A1H44 . . . C 3 9.701 -2.266 5.507 1 60.53 ? H221 A1H44 1201 A 1 HETATM 41 H H011 A1H44 . . . C 3 12.549 -3.163 17.292 1 47.05 ? H011 A1H44 1201 A 1 HETATM 42 H H021 A1H44 . . . C 3 12.716 -5.455 18.153 1 49.01 ? H021 A1H44 1201 A 1 HETATM 43 H H031 A1H44 . . . C 3 12.696 -7.377 16.622 1 44.01 ? H031 A1H44 1201 A 1 HETATM 44 H H181 A1H44 . . . C 3 11.282 -1.204 11.239 1 53.32 ? H181 A1H44 1201 A 1 HETATM 45 H H251 A1H44 . . . C 3 13.751 -10.124 13.108 1 64.3 ? H251 A1H44 1201 A 1 HETATM 46 H H261 A1H44 . . . C 3 10.854 -9.63 12.405 1 73.16 ? H261 A1H44 1201 A 1 HETATM 47 H H262 A1H44 . . . C 3 11.317 -10.601 13.81 1 73.16 ? H262 A1H44 1201 A 1 HETATM 48 H H091 A1H44 . . . C 3 12.059 -1.384 13.04 1 42.86 ? H091 A1H44 1201 A 1 HETATM 49 H H131 A1H44 . . . C 3 12.094 -6.936 13.004 1 54.35 ? H131 A1H44 1201 A 1 HETATM 50 H H271 A1H44 . . . C 3 12.411 -10.948 11.237 1 56.49 ? H271 A1H44 1201 A 1 HETATM 51 H H281 A1H44 . . . C 3 13.805 -8.107 11.892 1 57.53 ? H281 A1H44 1201 A 1 # _model_server_stats.io_time_ms 85 _model_server_stats.parse_time_ms 113 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 353 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 51 #