data_8S5Z
#
_model_server_result.job_id            -mC4y2CHRJHPQHexCDTXXg 
_model_server_result.datetime_utc      '2024-10-13 22:20:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8s5z 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":602}' 
#
_entry.id    8S5Z 
#
_exptl.entry_id    8S5Z 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              335.872 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Hydroxychloroquine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8S5Z 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8S5Z 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 B CYS 22 1_555 A SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
covale ? covale1 B ND2 ASN 45 A ASN 45 1_555 C C1 NAG . A NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? 
#
_chem_comp.formula           'C18 H26 Cl N3 O' 
_chem_comp.formula_weight    335.872 
_chem_comp.id                A1H5D 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Hydroxychloroquine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     2-[[(4~{R})-4-[(7-chloranylquinolin-4-yl)amino]pentyl]-ethyl-amino]ethanol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C14 O02 A1H5D sing 1 n n 
C14 C10 A1H5D sing 2 n n 
C15 C12 A1H5D sing 3 n n 
C12 N03 A1H5D sing 4 n n 
C10 N03 A1H5D sing 5 n n 
N03 C09 A1H5D sing 6 n n 
C09 C07 A1H5D sing 7 n n 
C17 C20 A1H5D doub 8 n y 
C17 C13 A1H5D sing 9 n y 
C07 C06 A1H5D sing 10 n n 
C20 N05 A1H5D sing 11 n y 
C08 C11 A1H5D sing 12 n n 
C08 N04 A1H5D sing 13 n n 
C08 C06 A1H5D sing 14 n n 
N04 C13 A1H5D sing 15 n n 
C13 C16 A1H5D doub 16 n y 
N05 C18 A1H5D doub 17 n y 
C16 C18 A1H5D sing 18 n y 
C16 C19 A1H5D sing 19 n y 
C18 C21 A1H5D sing 20 n y 
C19 C22 A1H5D doub 21 n y 
C21 C23 A1H5D doub 22 n y 
C22 C23 A1H5D sing 23 n y 
C23 CL01 A1H5D sing 24 n n 
C14 H142 A1H5D sing 25 n n 
C14 H141 A1H5D sing 26 n n 
C12 H122 A1H5D sing 27 n n 
C12 H121 A1H5D sing 28 n n 
C11 H111 A1H5D sing 29 n n 
C11 H112 A1H5D sing 30 n n 
C11 H113 A1H5D sing 31 n n 
C06 H061 A1H5D sing 32 n n 
C06 H062 A1H5D sing 33 n n 
C07 H072 A1H5D sing 34 n n 
C07 H071 A1H5D sing 35 n n 
C08 H081 A1H5D sing 36 n n 
C09 H092 A1H5D sing 37 n n 
C09 H091 A1H5D sing 38 n n 
C10 H102 A1H5D sing 39 n n 
C10 H101 A1H5D sing 40 n n 
C15 H153 A1H5D sing 41 n n 
C15 H152 A1H5D sing 42 n n 
C15 H151 A1H5D sing 43 n n 
C17 H171 A1H5D sing 44 n n 
C19 H191 A1H5D sing 45 n n 
C20 H201 A1H5D sing 46 n n 
C21 H211 A1H5D sing 47 n n 
C22 H221 A1H5D sing 48 n n 
N04 H041 A1H5D sing 49 n n 
O02 H021 A1H5D sing 50 n n 
#
_atom_sites.entry_id                     8S5Z 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 NAG A 1 601 460 NAG NAG . 
D 4 A1H5D A 1 602 461 A1H5D HCQ . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C14 A1H5D . . . D 4 147.541 151.194 147.959 1 40 ? C14 A1H5D 602 A 1 
HETATM 2 C C13 A1H5D . . . D 4 150.019 143.879 147.633 1 40 ? C13 A1H5D 602 A 1 
HETATM 3 C C12 A1H5D . . . D 4 147.315 148.63 149.441 1 40 ? C12 A1H5D 602 A 1 
HETATM 4 C C11 A1H5D . . . D 4 151.393 147.271 146.96 1 40 ? C11 A1H5D 602 A 1 
HETATM 5 C C06 A1H5D . . . D 4 149.121 146.553 146.202 1 40 ? C06 A1H5D 602 A 1 
HETATM 6 C C07 A1H5D . . . D 4 148.357 147.044 147.415 1 40 ? C07 A1H5D 602 A 1 
HETATM 7 C C08 A1H5D . . . D 4 150.52 146.094 146.57 1 40 ? C08 A1H5D 602 A 1 
HETATM 8 C C09 A1H5D . . . D 4 147.821 148.427 147.108 1 40 ? C09 A1H5D 602 A 1 
HETATM 9 C C10 A1H5D . . . D 4 146.399 150.191 147.812 1 40 ? C10 A1H5D 602 A 1 
HETATM 10 C C15 A1H5D . . . D 4 146.477 149.373 150.477 1 40 ? C15 A1H5D 602 A 1 
HETATM 11 C C16 A1H5D . . . D 4 149.909 143.118 148.743 1 40 ? C16 A1H5D 602 A 1 
HETATM 12 C C17 A1H5D . . . D 4 149.749 143.353 146.427 1 40 ? C17 A1H5D 602 A 1 
HETATM 13 C C18 A1H5D . . . D 4 149.523 141.811 148.629 1 40 ? C18 A1H5D 602 A 1 
HETATM 14 C C19 A1H5D . . . D 4 150.168 143.626 149.999 1 40 ? C19 A1H5D 602 A 1 
HETATM 15 C C20 A1H5D . . . D 4 149.366 142.046 146.329 1 40 ? C20 A1H5D 602 A 1 
HETATM 16 C C21 A1H5D . . . D 4 149.395 141.007 149.738 1 40 ? C21 A1H5D 602 A 1 
HETATM 17 C C22 A1H5D . . . D 4 150.051 142.838 151.113 1 40 ? C22 A1H5D 602 A 1 
HETATM 18 C C23 A1H5D . . . D 4 149.666 141.534 150.979 1 40 ? C23 A1H5D 602 A 1 
HETATM 19 N N03 A1H5D . . . D 4 146.824 148.824 148.083 1 40 ? N03 A1H5D 602 A 1 
HETATM 20 N N04 A1H5D . . . D 4 150.437 145.258 147.72 1 40 ? N04 A1H5D 602 A 1 
HETATM 21 N N05 A1H5D . . . D 4 149.267 141.304 147.431 1 40 ? N05 A1H5D 602 A 1 
HETATM 22 O O02 A1H5D . . . D 4 147.021 152.402 148.421 1 40 ? O02 A1H5D 602 A 1 
HETATM 23 CL CL01 A1H5D . . . D 4 149.533 140.568 152.446 1 40 ? CL01 A1H5D 602 A 1 
#
_model_server_stats.io_time_ms              91 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           23 
#