data_8S60 # _model_server_result.job_id IitQJiEguAfLyFi7WtNGxw _model_server_result.datetime_utc '2025-06-19 06:47:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8s60 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":1202}' # _entry.id 8S60 # _exptl.entry_id 8S60 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8S60 _cell.length_a 90.419 _cell.length_b 98.162 _cell.length_c 119.579 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8S60 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,N,O 1 1 C,D,J,K,L,M,P,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 138 A CYS 1081 1_555 F ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc2 A ND1 HIS 141 A HIS 1084 1_555 F ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc3 A SG CYS 146 A CYS 1089 1_555 F ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc4 A SG CYS 149 A CYS 1092 1_555 F ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc5 C SG CYS 138 C CYS 1081 1_555 K ZN ZN . C ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc6 C ND1 HIS 141 C HIS 1084 1_555 K ZN ZN . C ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc7 C SG CYS 146 C CYS 1089 1_555 K ZN ZN . C ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc8 C SG CYS 149 C CYS 1092 1_555 K ZN ZN . C ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8S60 _atom_sites.fract_transf_matrix[1][1] 0.01106 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010187 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008363 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 A1H5B A 1 1201 1201 A1H5B DRG . F 4 ZN A 1 1202 2 ZN ZN . G 5 SO4 A 1 1203 1 SO4 SO4 . H 5 SO4 A 1 1204 3 SO4 SO4 . I 6 GOL B 1 1201 1204 GOL GOL . J 3 A1H5B C 1 1201 1201 A1H5B DRG . K 4 ZN C 1 1202 1 ZN ZN . L 5 SO4 C 1 1203 2 SO4 SO4 . M 5 SO4 D 1 1201 4 SO4 SO4 . N 7 HOH A 1 1301 158 HOH HOH . N 7 HOH A 2 1302 89 HOH HOH . N 7 HOH A 3 1303 47 HOH HOH . N 7 HOH A 4 1304 177 HOH HOH . N 7 HOH A 5 1305 57 HOH HOH . N 7 HOH A 6 1306 103 HOH HOH . N 7 HOH A 7 1307 168 HOH HOH . N 7 HOH A 8 1308 58 HOH HOH . N 7 HOH A 9 1309 114 HOH HOH . N 7 HOH A 10 1310 97 HOH HOH . N 7 HOH A 11 1311 138 HOH HOH . N 7 HOH A 12 1312 95 HOH HOH . N 7 HOH A 13 1313 99 HOH HOH . N 7 HOH A 14 1314 87 HOH HOH . N 7 HOH A 15 1315 126 HOH HOH . N 7 HOH A 16 1316 135 HOH HOH . N 7 HOH A 17 1317 30 HOH HOH . N 7 HOH A 18 1318 124 HOH HOH . N 7 HOH A 19 1319 141 HOH HOH . N 7 HOH A 20 1320 63 HOH HOH . N 7 HOH A 21 1321 50 HOH HOH . N 7 HOH A 22 1322 79 HOH HOH . N 7 HOH A 23 1323 163 HOH HOH . N 7 HOH A 24 1324 83 HOH HOH . N 7 HOH A 25 1325 34 HOH HOH . N 7 HOH A 26 1326 134 HOH HOH . N 7 HOH A 27 1327 82 HOH HOH . N 7 HOH A 28 1328 5 HOH HOH . N 7 HOH A 29 1329 48 HOH HOH . N 7 HOH A 30 1330 56 HOH HOH . N 7 HOH A 31 1331 112 HOH HOH . N 7 HOH A 32 1332 44 HOH HOH . N 7 HOH A 33 1333 167 HOH HOH . N 7 HOH A 34 1334 37 HOH HOH . N 7 HOH A 35 1335 119 HOH HOH . N 7 HOH A 36 1336 54 HOH HOH . N 7 HOH A 37 1337 6 HOH HOH . N 7 HOH A 38 1338 46 HOH HOH . N 7 HOH A 39 1339 51 HOH HOH . N 7 HOH A 40 1340 20 HOH HOH . N 7 HOH A 41 1341 59 HOH HOH . N 7 HOH A 42 1342 65 HOH HOH . N 7 HOH A 43 1343 143 HOH HOH . N 7 HOH A 44 1344 19 HOH HOH . N 7 HOH A 45 1345 174 HOH HOH . N 7 HOH A 46 1346 36 HOH HOH . N 7 HOH A 47 1347 43 HOH HOH . N 7 HOH A 48 1348 74 HOH HOH . N 7 HOH A 49 1349 96 HOH HOH . N 7 HOH A 50 1350 52 HOH HOH . N 7 HOH A 51 1351 2 HOH HOH . N 7 HOH A 52 1352 169 HOH HOH . N 7 HOH A 53 1353 120 HOH HOH . N 7 HOH A 54 1354 84 HOH HOH . N 7 HOH A 55 1355 75 HOH HOH . N 7 HOH A 56 1356 106 HOH HOH . N 7 HOH A 57 1357 32 HOH HOH . N 7 HOH A 58 1358 60 HOH HOH . N 7 HOH A 59 1359 45 HOH HOH . N 7 HOH A 60 1360 55 HOH HOH . N 7 HOH A 61 1361 53 HOH HOH . N 7 HOH A 62 1362 94 HOH HOH . N 7 HOH A 63 1363 24 HOH HOH . N 7 HOH A 64 1364 101 HOH HOH . N 7 HOH A 65 1365 129 HOH HOH . N 7 HOH A 66 1366 118 HOH HOH . N 7 HOH A 67 1367 64 HOH HOH . N 7 HOH A 68 1368 10 HOH HOH . N 7 HOH A 69 1369 172 HOH HOH . N 7 HOH A 70 1370 17 HOH HOH . N 7 HOH A 71 1371 33 HOH HOH . N 7 HOH A 72 1372 9 HOH HOH . N 7 HOH A 73 1373 76 HOH HOH . N 7 HOH A 74 1374 91 HOH HOH . N 7 HOH A 75 1375 40 HOH HOH . N 7 HOH A 76 1376 150 HOH HOH . N 7 HOH A 77 1377 160 HOH HOH . N 7 HOH A 78 1378 175 HOH HOH . N 7 HOH A 79 1379 66 HOH HOH . N 7 HOH A 80 1380 151 HOH HOH . N 7 HOH A 81 1381 69 HOH HOH . N 7 HOH A 82 1382 165 HOH HOH . O 7 HOH B 1 1301 170 HOH HOH . O 7 HOH B 2 1302 7 HOH HOH . O 7 HOH B 3 1303 178 HOH HOH . O 7 HOH B 4 1304 152 HOH HOH . O 7 HOH B 5 1305 62 HOH HOH . O 7 HOH B 6 1306 68 HOH HOH . O 7 HOH B 7 1307 108 HOH HOH . O 7 HOH B 8 1308 61 HOH HOH . O 7 HOH B 9 1309 29 HOH HOH . O 7 HOH B 10 1310 115 HOH HOH . O 7 HOH B 11 1311 67 HOH HOH . O 7 HOH B 12 1312 3 HOH HOH . O 7 HOH B 13 1313 123 HOH HOH . O 7 HOH B 14 1314 15 HOH HOH . O 7 HOH B 15 1315 137 HOH HOH . O 7 HOH B 16 1316 133 HOH HOH . P 7 HOH C 1 1301 121 HOH HOH . P 7 HOH C 2 1302 156 HOH HOH . P 7 HOH C 3 1303 154 HOH HOH . P 7 HOH C 4 1304 145 HOH HOH . P 7 HOH C 5 1305 153 HOH HOH . P 7 HOH C 6 1306 73 HOH HOH . P 7 HOH C 7 1307 104 HOH HOH . P 7 HOH C 8 1308 173 HOH HOH . P 7 HOH C 9 1309 148 HOH HOH . P 7 HOH C 10 1310 109 HOH HOH . P 7 HOH C 11 1311 100 HOH HOH . P 7 HOH C 12 1312 78 HOH HOH . P 7 HOH C 13 1313 102 HOH HOH . P 7 HOH C 14 1314 128 HOH HOH . P 7 HOH C 15 1315 16 HOH HOH . P 7 HOH C 16 1316 127 HOH HOH . P 7 HOH C 17 1317 147 HOH HOH . P 7 HOH C 18 1318 131 HOH HOH . P 7 HOH C 19 1319 92 HOH HOH . P 7 HOH C 20 1320 23 HOH HOH . P 7 HOH C 21 1321 98 HOH HOH . P 7 HOH C 22 1322 171 HOH HOH . P 7 HOH C 23 1323 142 HOH HOH . P 7 HOH C 24 1324 72 HOH HOH . P 7 HOH C 25 1325 1 HOH HOH . P 7 HOH C 26 1326 26 HOH HOH . P 7 HOH C 27 1327 77 HOH HOH . P 7 HOH C 28 1328 28 HOH HOH . P 7 HOH C 29 1329 80 HOH HOH . P 7 HOH C 30 1330 11 HOH HOH . P 7 HOH C 31 1331 155 HOH HOH . P 7 HOH C 32 1332 42 HOH HOH . P 7 HOH C 33 1333 81 HOH HOH . P 7 HOH C 34 1334 117 HOH HOH . P 7 HOH C 35 1335 136 HOH HOH . P 7 HOH C 36 1336 125 HOH HOH . P 7 HOH C 37 1337 18 HOH HOH . P 7 HOH C 38 1338 132 HOH HOH . P 7 HOH C 39 1339 130 HOH HOH . P 7 HOH C 40 1340 8 HOH HOH . P 7 HOH C 41 1341 149 HOH HOH . P 7 HOH C 42 1342 90 HOH HOH . P 7 HOH C 43 1343 157 HOH HOH . P 7 HOH C 44 1344 107 HOH HOH . P 7 HOH C 45 1345 176 HOH HOH . P 7 HOH C 46 1346 144 HOH HOH . P 7 HOH C 47 1347 70 HOH HOH . P 7 HOH C 48 1348 88 HOH HOH . P 7 HOH C 49 1349 71 HOH HOH . P 7 HOH C 50 1350 25 HOH HOH . P 7 HOH C 51 1351 122 HOH HOH . P 7 HOH C 52 1352 41 HOH HOH . P 7 HOH C 53 1353 4 HOH HOH . P 7 HOH C 54 1354 13 HOH HOH . P 7 HOH C 55 1355 27 HOH HOH . P 7 HOH C 56 1356 31 HOH HOH . P 7 HOH C 57 1357 38 HOH HOH . P 7 HOH C 58 1358 164 HOH HOH . P 7 HOH C 59 1359 159 HOH HOH . P 7 HOH C 60 1360 166 HOH HOH . P 7 HOH C 61 1361 93 HOH HOH . P 7 HOH C 62 1362 162 HOH HOH . P 7 HOH C 63 1363 116 HOH HOH . Q 7 HOH D 1 1301 21 HOH HOH . Q 7 HOH D 2 1302 113 HOH HOH . Q 7 HOH D 3 1303 22 HOH HOH . Q 7 HOH D 4 1304 35 HOH HOH . Q 7 HOH D 5 1305 49 HOH HOH . Q 7 HOH D 6 1306 86 HOH HOH . Q 7 HOH D 7 1307 14 HOH HOH . Q 7 HOH D 8 1308 111 HOH HOH . Q 7 HOH D 9 1309 146 HOH HOH . Q 7 HOH D 10 1310 12 HOH HOH . Q 7 HOH D 11 1311 85 HOH HOH . Q 7 HOH D 12 1312 39 HOH HOH . Q 7 HOH D 13 1313 140 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 4 _atom_site.Cartn_x -58.642 _atom_site.Cartn_y -23.591 _atom_site.Cartn_z 21.546 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.88 _atom_site.pdbx_formal_charge 0 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1202 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 42 _model_server_stats.query_time_ms 351 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 1 #