data_8S6J # _model_server_result.job_id zlGbGvANbw8eTbmWBzqrWA _model_server_result.datetime_utc '2024-12-02 16:41:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8s6j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 8S6J # _exptl.entry_id 8S6J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 379.489 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEGA-10 _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8S6J _cell.length_a 109.17 _cell.length_b 109.17 _cell.length_c 208.925 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8S6J _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 109.17 109.17 0 3 'crystal symmetry operation' 3_655 -y+1,x,z 0 -1 0 1 0 0 0 0 1 109.17 0 0 4 'crystal symmetry operation' 4_565 y,-x+1,z 0 1 0 -1 0 0 0 0 1 0 109.17 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H37 N O7' _chem_comp.formula_weight 379.489 _chem_comp.id 2CV _chem_comp.mon_nstd_flag . _chem_comp.name HEGA-10 _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 C12 2CV sing 1 n n C9 C1 2CV sing 2 n n C12 C15 2CV sing 3 n n C15 C18 2CV sing 4 n n C18 C21 2CV sing 5 n n C21 C24 2CV sing 6 n n C24 C27 2CV sing 7 n n C27 C30 2CV sing 8 n n C30 N33 2CV sing 9 n n C30 O34 2CV doub 10 n n N33 C35 2CV sing 11 n n N33 C36 2CV sing 12 n n C35 C60 2CV sing 13 n n C36 C37 2CV sing 14 n n C37 C40 2CV sing 15 n n C37 O47 2CV sing 16 n n C40 C41 2CV sing 17 n n C40 O49 2CV sing 18 n n C41 C42 2CV sing 19 n n C41 O51 2CV sing 20 n n C42 C43 2CV sing 21 n n C42 O53 2CV sing 22 n n C43 O44 2CV sing 23 n n C60 O63 2CV sing 24 n n C1 C0 2CV sing 25 n n C9 H91C 2CV sing 26 n n C9 H92C 2CV sing 27 n n C12 H121 2CV sing 28 n n C12 H122 2CV sing 29 n n C1 H11C 2CV sing 30 n n C1 H12C 2CV sing 31 n n C15 H151 2CV sing 32 n n C15 H152 2CV sing 33 n n C18 H181 2CV sing 34 n n C18 H182 2CV sing 35 n n C21 H211 2CV sing 36 n n C21 H212 2CV sing 37 n n C24 H241 2CV sing 38 n n C24 H242 2CV sing 39 n n C27 H271 2CV sing 40 n n C27 H272 2CV sing 41 n n C35 H351 2CV sing 42 n n C35 H352 2CV sing 43 n n C36 H361 2CV sing 44 n n C36 H362 2CV sing 45 n n C60 H601 2CV sing 46 n n C60 H602 2CV sing 47 n n C37 H37 2CV sing 48 n n C40 H40 2CV sing 49 n n O47 H47 2CV sing 50 n n C41 H41 2CV sing 51 n n O49 H49 2CV sing 52 n n C42 H42 2CV sing 53 n n O51 H51 2CV sing 54 n n C43 H431 2CV sing 55 n n C43 H432 2CV sing 56 n n O53 H53 2CV sing 57 n n O44 H44 2CV sing 58 n n O63 H63 2CV sing 59 n n C0 H01C 2CV sing 60 n n C0 H02C 2CV sing 61 n n C0 H03C 2CV sing 62 n n # _atom_sites.entry_id 8S6J _atom_sites.fract_transf_matrix[1][1] 0.00916 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00916 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004786 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 301 301 NA NA . C 2 NA A 1 302 302 NA NA . D 2 NA A 1 303 303 NA NA . E 3 657 A 1 304 304 657 657 . F 4 2CV A 1 305 305 2CV 2CV . G 5 PG6 A 1 306 306 PG6 12P . H 6 CL A 1 307 1 CL CL . I 6 CL A 1 308 2 CL CL . J 7 HOH A 1 401 22 HOH HOH . J 7 HOH A 2 402 29 HOH HOH . J 7 HOH A 3 403 19 HOH HOH . J 7 HOH A 4 404 5 HOH HOH . J 7 HOH A 5 405 6 HOH HOH . J 7 HOH A 6 406 15 HOH HOH . J 7 HOH A 7 407 27 HOH HOH . J 7 HOH A 8 408 7 HOH HOH . J 7 HOH A 9 409 2 HOH HOH . J 7 HOH A 10 410 24 HOH HOH . J 7 HOH A 11 411 17 HOH HOH . J 7 HOH A 12 412 1 HOH HOH . J 7 HOH A 13 413 4 HOH HOH . J 7 HOH A 14 414 13 HOH HOH . J 7 HOH A 15 415 18 HOH HOH . J 7 HOH A 16 416 14 HOH HOH . J 7 HOH A 17 417 10 HOH HOH . J 7 HOH A 18 418 30 HOH HOH . J 7 HOH A 19 419 28 HOH HOH . J 7 HOH A 20 420 11 HOH HOH . J 7 HOH A 21 421 9 HOH HOH . J 7 HOH A 22 422 8 HOH HOH . J 7 HOH A 23 423 25 HOH HOH . J 7 HOH A 24 424 21 HOH HOH . J 7 HOH A 25 425 20 HOH HOH . J 7 HOH A 26 426 12 HOH HOH . J 7 HOH A 27 427 23 HOH HOH . J 7 HOH A 28 428 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C9 2CV . . . F 4 72.041 49.575 18.046 1 44.35 ? C9 2CV 305 A 1 HETATM 2 C C12 2CV . . . F 4 73.356 49.888 17.365 1 44.49 ? C12 2CV 305 A 1 HETATM 3 C C15 2CV . . . F 4 73.367 49.751 15.873 1 38.09 ? C15 2CV 305 A 1 HETATM 4 C C18 2CV . . . F 4 74.718 49.7 15.209 1 43.27 ? C18 2CV 305 A 1 HETATM 5 C C21 2CV . . . F 4 74.681 50.279 13.834 1 53.33 ? C21 2CV 305 A 1 HETATM 6 C C24 2CV . . . F 4 75.651 49.64 12.852 1 64.05 ? C24 2CV 305 A 1 HETATM 7 C C27 2CV . . . F 4 76.852 50.447 12.591 1 76.18 ? C27 2CV 305 A 1 HETATM 8 C C30 2CV . . . F 4 77.654 50.117 11.344 1 122.8 ? C30 2CV 305 A 1 HETATM 9 N N33 2CV . . . F 4 77.093 50.264 10.118 1 119.23 ? N33 2CV 305 A 1 HETATM 10 O O34 2CV . . . F 4 78.835 49.788 11.466 1 154.5 ? O34 2CV 305 A 1 HETATM 11 C C35 2CV . . . F 4 77.802 49.791 8.915 1 116.08 ? C35 2CV 305 A 1 HETATM 12 C C36 2CV . . . F 4 75.793 50.908 9.881 1 101.1 ? C36 2CV 305 A 1 HETATM 13 C C37 2CV . . . F 4 74.617 50.028 10.285 1 64.75 ? C37 2CV 305 A 1 HETATM 14 C C40 2CV . . . F 4 73.662 49.535 9.187 1 84.52 ? C40 2CV 305 A 1 HETATM 15 C C41 2CV . . . F 4 73.817 50.055 7.738 1 95.16 ? C41 2CV 305 A 1 HETATM 16 C C42 2CV . . . F 4 72.521 50.306 6.939 1 54.92 ? C42 2CV 305 A 1 HETATM 17 C C43 2CV . . . F 4 72.241 49.229 5.884 1 77.24 ? C43 2CV 305 A 1 HETATM 18 O O44 2CV . . . F 4 70.862 48.901 5.613 1 59.91 ? O44 2CV 305 A 1 HETATM 19 O O47 2CV . . . F 4 73.905 50.725 11.294 1 75.71 ? O47 2CV 305 A 1 HETATM 20 O O49 2CV . . . F 4 72.333 49.55 9.709 1 59.35 ? O49 2CV 305 A 1 HETATM 21 O O51 2CV . . . F 4 74.779 49.247 6.971 1 99.78 ? O51 2CV 305 A 1 HETATM 22 O O53 2CV . . . F 4 72.704 51.606 6.309 1 67.02 ? O53 2CV 305 A 1 HETATM 23 C C60 2CV . . . F 4 78.7 50.827 8.272 1 88.77 ? C60 2CV 305 A 1 HETATM 24 O O63 2CV . . . F 4 79.528 51.427 9.254 1 86.71 ? O63 2CV 305 A 1 HETATM 25 C C1 2CV . . . F 4 72.29 49.22 19.504 1 56.77 ? C1 2CV 305 A 1 HETATM 26 C C0 2CV . . . F 4 71.141 49.095 20.469 1 47.29 ? C0 2CV 305 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 75 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 610 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 26 #