data_8S6J # _model_server_result.job_id DGGqWkYQZQVnebcBuH0J3g _model_server_result.datetime_utc '2024-12-03 12:53:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8s6j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":306}' # _entry.id 8S6J # _exptl.entry_id 8S6J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 266.331 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8S6J _cell.length_a 109.17 _cell.length_b 109.17 _cell.length_c 208.925 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8S6J _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 109.17 109.17 0 3 'crystal symmetry operation' 3_655 -y+1,x,z 0 -1 0 1 0 0 0 0 1 109.17 0 0 4 'crystal symmetry operation' 4_565 y,-x+1,z 0 1 0 -1 0 0 0 0 1 0 109.17 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H26 O6' _chem_comp.formula_weight 266.331 _chem_comp.id PG6 _chem_comp.mon_nstd_flag . _chem_comp.name 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PG6 sing 320 n n C1 H11 PG6 sing 321 n n C1 H12 PG6 sing 322 n n C1 H13 PG6 sing 323 n n O1 C2 PG6 sing 324 n n C2 C3 PG6 sing 325 n n C2 H21 PG6 sing 326 n n C2 H22 PG6 sing 327 n n C3 O2 PG6 sing 328 n n C3 H31 PG6 sing 329 n n C3 H32 PG6 sing 330 n n O2 C4 PG6 sing 331 n n C4 C5 PG6 sing 332 n n C4 H41 PG6 sing 333 n n C4 H42 PG6 sing 334 n n C5 O3 PG6 sing 335 n n C5 H51 PG6 sing 336 n n C5 H52 PG6 sing 337 n n O3 C6 PG6 sing 338 n n C6 C7 PG6 sing 339 n n C6 H61 PG6 sing 340 n n C6 H62 PG6 sing 341 n n C7 O4 PG6 sing 342 n n C7 H71 PG6 sing 343 n n C7 H72 PG6 sing 344 n n O4 C8 PG6 sing 345 n n C8 C9 PG6 sing 346 n n C8 H81 PG6 sing 347 n n C8 H82 PG6 sing 348 n n C9 O5 PG6 sing 349 n n C9 H91 PG6 sing 350 n n C9 H92 PG6 sing 351 n n O5 C10 PG6 sing 352 n n C10 C11 PG6 sing 353 n n C10 H101 PG6 sing 354 n n C10 H102 PG6 sing 355 n n C11 O6 PG6 sing 356 n n C11 H111 PG6 sing 357 n n C11 H112 PG6 sing 358 n n O6 C12 PG6 sing 359 n n C12 H121 PG6 sing 360 n n C12 H122 PG6 sing 361 n n C12 H123 PG6 sing 362 n n # _atom_sites.entry_id 8S6J _atom_sites.fract_transf_matrix[1][1] 0.00916 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00916 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004786 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 301 301 NA NA . C 2 NA A 1 302 302 NA NA . D 2 NA A 1 303 303 NA NA . E 3 657 A 1 304 304 657 657 . F 4 2CV A 1 305 305 2CV 2CV . G 5 PG6 A 1 306 306 PG6 12P . H 6 CL A 1 307 1 CL CL . I 6 CL A 1 308 2 CL CL . J 7 HOH A 1 401 22 HOH HOH . J 7 HOH A 2 402 29 HOH HOH . J 7 HOH A 3 403 19 HOH HOH . J 7 HOH A 4 404 5 HOH HOH . J 7 HOH A 5 405 6 HOH HOH . J 7 HOH A 6 406 15 HOH HOH . J 7 HOH A 7 407 27 HOH HOH . J 7 HOH A 8 408 7 HOH HOH . J 7 HOH A 9 409 2 HOH HOH . J 7 HOH A 10 410 24 HOH HOH . J 7 HOH A 11 411 17 HOH HOH . J 7 HOH A 12 412 1 HOH HOH . J 7 HOH A 13 413 4 HOH HOH . J 7 HOH A 14 414 13 HOH HOH . J 7 HOH A 15 415 18 HOH HOH . J 7 HOH A 16 416 14 HOH HOH . J 7 HOH A 17 417 10 HOH HOH . J 7 HOH A 18 418 30 HOH HOH . J 7 HOH A 19 419 28 HOH HOH . J 7 HOH A 20 420 11 HOH HOH . J 7 HOH A 21 421 9 HOH HOH . J 7 HOH A 22 422 8 HOH HOH . J 7 HOH A 23 423 25 HOH HOH . J 7 HOH A 24 424 21 HOH HOH . J 7 HOH A 25 425 20 HOH HOH . J 7 HOH A 26 426 12 HOH HOH . J 7 HOH A 27 427 23 HOH HOH . J 7 HOH A 28 428 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PG6 . . . G 5 73.34 65.78 23.188 1 90.8 ? C1 PG6 306 A 1 HETATM 2 O O1 PG6 . . . G 5 73.085 65.623 21.789 1 82.71 ? O1 PG6 306 A 1 HETATM 3 C C2 PG6 . . . G 5 72.131 64.614 21.477 1 67.14 ? C2 PG6 306 A 1 HETATM 4 C C3 PG6 . . . G 5 72.762 63.283 21.543 1 57.28 ? C3 PG6 306 A 1 HETATM 5 O O2 PG6 . . . G 5 73.857 63.288 20.638 1 72.52 ? O2 PG6 306 A 1 HETATM 6 C C4 PG6 . . . G 5 74.604 62.069 20.702 1 87.22 ? C4 PG6 306 A 1 HETATM 7 C C5 PG6 . . . G 5 76.109 62.273 20.701 1 81.96 ? C5 PG6 306 A 1 HETATM 8 O O3 PG6 . . . G 5 76.554 62.744 19.428 1 87.94 ? O3 PG6 306 A 1 HETATM 9 C C6 PG6 . . . G 5 77.42 61.837 18.753 1 81.64 ? C6 PG6 306 A 1 HETATM 10 C C7 PG6 . . . G 5 78.325 62.627 17.853 1 80.96 ? C7 PG6 306 A 1 HETATM 11 O O4 PG6 . . . G 5 77.842 62.662 16.513 1 73 ? O4 PG6 306 A 1 HETATM 12 C C8 PG6 . . . G 5 78.838 62.252 15.583 1 79.58 ? C8 PG6 306 A 1 HETATM 13 C C9 PG6 . . . G 5 78.279 61.272 14.644 1 84.96 ? C9 PG6 306 A 1 HETATM 14 O O5 PG6 . . . G 5 77.923 61.956 13.456 1 95.38 ? O5 PG6 306 A 1 HETATM 15 C C10 PG6 . . . G 5 78.551 61.408 12.305 1 97.25 ? C10 PG6 306 A 1 HETATM 16 C C11 PG6 . . . G 5 77.513 60.722 11.444 1 80.9 ? C11 PG6 306 A 1 HETATM 17 O O6 PG6 . . . G 5 76.718 61.674 10.75 1 47.02 ? O6 PG6 306 A 1 HETATM 18 C C12 PG6 . . . G 5 77.472 62.443 9.802 1 69.45 ? C12 PG6 306 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 18 #