data_8S7J # _model_server_result.job_id iW1X0YzxVKBLzw4RcHv7XQ _model_server_result.datetime_utc '2024-11-04 23:15:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8s7j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 8S7J # _exptl.entry_id 8S7J _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 325.448 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[(4-methoxyphenyl)methyl]-4-[(4-methylpiperazin-1-yl)methyl]aniline _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8S7J _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8S7J _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 240-meric _pdbx_struct_assembly.oligomeric_count 240 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'point symmetry operation' ? ? 0.30902 0.5 -0.80902 0.5 -0.80902 -0.30902 -0.80902 -0.30902 -0.5 218.25 353.14 571.39 3 'point symmetry operation' ? ? 0 0 -1 -1 0 0 0 1 0 436.5 436.5 -0.000015 4 'point symmetry operation' ? ? -0.30902 0.5 -0.80902 0.5 0.80902 0.30902 0.80902 -0.30902 -0.5 353.14 -134.89 218.25 5 'point symmetry operation' ? ? -0.80902 0.30902 -0.5 -0.30902 0.5 0.80902 0.5 0.80902 -0.30902 436.5 0.000008 -0.000012 6 'point symmetry operation' ? ? 0.5 0.80902 -0.30902 0.80902 -0.30902 0.5 0.30902 -0.5 -0.80902 -0.000012 0.00002 436.5 7 'point symmetry operation' ? ? 0.30902 -0.5 -0.80902 -0.5 -0.80902 0.30902 -0.80902 0.30902 -0.5 436.5 436.5 436.5 8 'point symmetry operation' ? ? -0.30902 -0.5 -0.80902 0.5 -0.80902 0.30902 -0.80902 -0.30902 0.5 571.39 218.25 353.14 9 'point symmetry operation' ? ? -0.5 0.80902 -0.30902 -0.80902 -0.30902 0.5 0.30902 0.5 0.80902 218.25 353.14 -134.89 10 'point symmetry operation' ? ? 0.80902 0.30902 -0.5 0.30902 0.5 0.80902 0.5 -0.80902 0.30902 83.364 -134.89 218.25 11 'point symmetry operation' ? ? 0 1 0 0 0 1 1 0 0 -0.000015 0.000015 0 12 'point symmetry operation' ? ? 0.80902 -0.30902 -0.5 0.30902 -0.5 0.80902 -0.5 -0.80902 -0.30902 218.25 83.364 571.39 13 'point symmetry operation' ? ? -0.80902 -0.30902 -0.5 -0.30902 -0.5 0.80902 -0.5 0.80902 0.30902 571.39 218.25 83.364 14 'point symmetry operation' ? ? -0.5 -0.80902 0.30902 0.80902 -0.30902 0.5 -0.30902 0.5 0.80902 436.5 0.00002 -0.000008 15 'point symmetry operation' ? ? -0.30902 0.5 0.80902 -0.5 -0.80902 0.30902 0.80902 -0.30902 0.5 -0.000008 436.5 0.000005 16 'point symmetry operation' ? ? 0.80902 -0.30902 0.5 -0.30902 0.5 0.80902 -0.5 -0.80902 0.30902 0.000005 0.000008 436.5 17 'point symmetry operation' ? ? 0.80902 0.30902 0.5 -0.30902 -0.5 0.80902 0.5 -0.80902 -0.30902 -134.89 218.25 353.14 18 'point symmetry operation' ? ? 0 -1 0 0 0 1 -1 0 0 436.5 0.000015 436.5 19 'point symmetry operation' ? ? -0.80902 0.30902 0.5 0.30902 -0.5 0.80902 0.5 0.80902 0.30902 218.25 83.364 -134.89 20 'point symmetry operation' ? ? 0 0 1 1 0 0 0 1 0 0 0.000015 -0.000015 21 'point symmetry operation' ? ? 0.30902 -0.5 0.80902 -0.5 -0.80902 -0.30902 0.80902 -0.30902 -0.5 83.364 571.39 218.25 22 'point symmetry operation' ? ? -0.30902 -0.5 0.80902 -0.5 0.80902 0.30902 -0.80902 -0.30902 -0.5 218.25 83.364 571.39 23 'point symmetry operation' ? ? 0.5 -0.80902 0.30902 -0.80902 -0.30902 0.5 -0.30902 -0.5 -0.80902 218.25 353.14 571.39 24 'point symmetry operation' ? ? -0.80902 -0.30902 0.5 0.30902 0.5 0.80902 -0.5 0.80902 -0.30902 353.14 -134.89 218.25 25 'point symmetry operation' ? ? 0.30902 0.5 0.80902 0.5 -0.80902 0.30902 0.80902 0.30902 -0.5 -134.89 218.25 83.364 26 'point symmetry operation' ? ? 0.5 0.80902 0.30902 0.80902 -0.30902 -0.5 -0.30902 0.5 -0.80902 -134.89 218.25 353.14 27 'point symmetry operation' ? ? 0.5 -0.80902 -0.30902 -0.80902 -0.30902 -0.5 0.30902 0.5 -0.80902 353.14 571.39 218.25 28 'point symmetry operation' ? ? -1 0 0 0 1 0 0 0 -1 436.5 0 436.5 29 'point symmetry operation' ? ? -0.5 -0.80902 -0.30902 -0.80902 0.30902 0.5 -0.30902 0.5 -0.80902 571.39 218.25 353.14 30 'point symmetry operation' ? ? -0.5 0.80902 0.30902 0.80902 0.30902 0.5 0.30902 0.5 -0.80902 83.364 -134.89 218.25 31 'point symmetry operation' ? ? 1 0 0 0 -1 0 0 0 -1 0 436.5 436.5 32 'point symmetry operation' ? ? 0.30902 0.5 -0.80902 -0.5 0.80902 0.30902 0.80902 0.30902 0.5 218.25 83.364 -134.89 33 'point symmetry operation' ? ? 0 0 -1 1 0 0 0 -1 0 436.5 0.000015 436.5 34 'point symmetry operation' ? ? -0.30902 0.5 -0.80902 -0.5 -0.80902 -0.30902 -0.80902 0.30902 0.5 353.14 571.39 218.25 35 'point symmetry operation' ? ? -0.80902 0.30902 -0.5 0.30902 -0.5 -0.80902 -0.5 -0.80902 0.30902 436.5 436.5 436.5 36 'point symmetry operation' ? ? 0.5 0.80902 -0.30902 -0.80902 0.30902 -0.5 -0.30902 0.5 0.80902 -0.000012 436.5 -0.000008 37 'point symmetry operation' ? ? 0.30902 -0.5 -0.80902 0.5 0.80902 -0.30902 0.80902 -0.30902 0.5 436.5 0.000003 0.000005 38 'point symmetry operation' ? ? -0.30902 -0.5 -0.80902 -0.5 0.80902 -0.30902 0.80902 0.30902 -0.5 571.39 218.25 83.364 39 'point symmetry operation' ? ? -0.5 0.80902 -0.30902 0.80902 0.30902 -0.5 -0.30902 -0.5 -0.80902 218.25 83.364 571.39 40 'point symmetry operation' ? ? 0.80902 0.30902 -0.5 -0.30902 -0.5 -0.80902 -0.5 0.80902 -0.30902 83.364 571.39 218.25 41 'point symmetry operation' ? ? 0 1 0 0 0 -1 -1 0 0 -0.000015 436.5 436.5 42 'point symmetry operation' ? ? 0.80902 -0.30902 -0.5 -0.30902 0.5 -0.80902 0.5 0.80902 0.30902 218.25 353.14 -134.89 43 'point symmetry operation' ? ? -0.80902 -0.30902 -0.5 0.30902 0.5 -0.80902 0.5 -0.80902 -0.30902 571.39 218.25 353.14 44 'point symmetry operation' ? ? -0.5 -0.80902 0.30902 -0.80902 0.30902 -0.5 0.30902 -0.5 -0.80902 436.5 436.5 436.5 45 'point symmetry operation' ? ? -0.30902 0.5 0.80902 0.5 0.80902 -0.30902 -0.80902 0.30902 -0.5 -0.000008 0.000003 436.5 46 'point symmetry operation' ? ? 0.80902 -0.30902 0.5 0.30902 -0.5 -0.80902 0.5 0.80902 -0.30902 0.000005 436.5 -0.000012 47 'point symmetry operation' ? ? 0.80902 0.30902 0.5 0.30902 0.5 -0.80902 -0.5 0.80902 0.30902 -134.89 218.25 83.364 48 'point symmetry operation' ? ? 0 -1 0 0 0 -1 1 0 0 436.5 436.5 0 49 'point symmetry operation' ? ? -0.80902 0.30902 0.5 -0.30902 0.5 -0.80902 -0.5 -0.80902 -0.30902 218.25 353.14 571.39 50 'point symmetry operation' ? ? 0 0 1 -1 0 0 0 -1 0 0 436.5 436.5 51 'point symmetry operation' ? ? 0.30902 -0.5 0.80902 0.5 0.80902 0.30902 -0.80902 0.30902 0.5 83.364 -134.89 218.25 52 'point symmetry operation' ? ? -0.30902 -0.5 0.80902 0.5 -0.80902 -0.30902 0.80902 0.30902 0.5 218.25 353.14 -134.89 53 'point symmetry operation' ? ? 0.5 -0.80902 0.30902 0.80902 0.30902 -0.5 0.30902 0.5 0.80902 218.25 83.364 -134.89 54 'point symmetry operation' ? ? -0.80902 -0.30902 0.5 -0.30902 -0.5 -0.80902 0.5 -0.80902 0.30902 353.14 571.39 218.25 55 'point symmetry operation' ? ? 0.30902 0.5 0.80902 -0.5 0.80902 -0.30902 -0.80902 -0.30902 0.5 -134.89 218.25 353.14 56 'point symmetry operation' ? ? 0.5 0.80902 0.30902 -0.80902 0.30902 0.5 0.30902 -0.5 0.80902 -134.89 218.25 83.364 57 'point symmetry operation' ? ? 0.5 -0.80902 -0.30902 0.80902 0.30902 0.5 -0.30902 -0.5 0.80902 353.14 -134.89 218.25 58 'point symmetry operation' ? ? -1 0 0 0 -1 0 0 0 1 436.5 436.5 0 59 'point symmetry operation' ? ? -0.5 -0.80902 -0.30902 0.80902 -0.30902 -0.5 0.30902 -0.5 0.80902 571.39 218.25 83.364 60 'point symmetry operation' ? ? -0.5 0.80902 0.30902 -0.80902 -0.30902 -0.5 -0.30902 -0.5 0.80902 83.364 571.39 218.25 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H27 N3 O' _chem_comp.formula_weight 325.448 _chem_comp.id A1H9Q _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[(4-methoxyphenyl)methyl]-4-[(4-methylpiperazin-1-yl)methyl]aniline _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 A1H9Q sing 1 n n O1 C2 A1H9Q sing 2 n n C2 C20 A1H9Q doub 3 n y C2 C3 A1H9Q sing 4 n y C20 C19 A1H9Q sing 5 n y C3 C4 A1H9Q doub 6 n y C8 C9 A1H9Q doub 7 n y C8 C7 A1H9Q sing 8 n y C9 C10 A1H9Q sing 9 n y C19 C5 A1H9Q doub 10 n y N1 C7 A1H9Q sing 11 n n N1 C6 A1H9Q sing 12 n n C4 C5 A1H9Q sing 13 n y C5 C6 A1H9Q sing 14 n n C7 C18 A1H9Q doub 15 n y C10 C11 A1H9Q sing 16 n n C10 C17 A1H9Q doub 17 n y C11 N2 A1H9Q sing 18 n n C18 C17 A1H9Q sing 19 n y N2 C12 A1H9Q sing 20 n n N2 C16 A1H9Q sing 21 n n C12 C13 A1H9Q sing 22 n n C13 N3 A1H9Q sing 23 n n C16 C15 A1H9Q sing 24 n n C15 N3 A1H9Q sing 25 n n N3 C14 A1H9Q sing 26 n n C1 H1 A1H9Q sing 27 n n C1 H2 A1H9Q sing 28 n n C1 H3 A1H9Q sing 29 n n C3 H4 A1H9Q sing 30 n n C4 H5 A1H9Q sing 31 n n C6 H6 A1H9Q sing 32 n n C6 H7 A1H9Q sing 33 n n C13 H9 A1H9Q sing 34 n n C13 H10 A1H9Q sing 35 n n N1 H8 A1H9Q sing 36 n n C8 H11 A1H9Q sing 37 n n C9 H12 A1H9Q sing 38 n n C11 H13 A1H9Q sing 39 n n C11 H14 A1H9Q sing 40 n n C12 H16 A1H9Q sing 41 n n C12 H17 A1H9Q sing 42 n n C14 H19 A1H9Q sing 43 n n C14 H20 A1H9Q sing 44 n n C14 H21 A1H9Q sing 45 n n C15 H22 A1H9Q sing 46 n n C15 H23 A1H9Q sing 47 n n C16 H24 A1H9Q sing 48 n n C16 H25 A1H9Q sing 49 n n C17 H26 A1H9Q sing 50 n n C18 H27 A1H9Q sing 51 n n C19 H28 A1H9Q sing 52 n n C20 H29 A1H9Q sing 53 n n # _atom_sites.entry_id 8S7J _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 A1H9Q A 1 301 301 A1H9Q 300 . F 6 MYR D 1 101 101 MYR MYR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 A1H9Q . . . E 5 282.244 191.911 331.654 1 0 ? C1 A1H9Q 301 A 1 HETATM 2 C C2 A1H9Q . . . E 5 280.212 192.366 332.478 1 0 ? C2 A1H9Q 301 A 1 HETATM 3 C C3 A1H9Q . . . E 5 279.102 193.129 332.809 1 0 ? C3 A1H9Q 301 A 1 HETATM 4 C C4 A1H9Q . . . E 5 278.023 192.541 333.441 1 0 ? C4 A1H9Q 301 A 1 HETATM 5 C C5 A1H9Q . . . E 5 278.049 191.192 333.743 1 0 ? C5 A1H9Q 301 A 1 HETATM 6 C C6 A1H9Q . . . E 5 276.872 190.552 334.432 1 0 ? C6 A1H9Q 301 A 1 HETATM 7 C C10 A1H9Q . . . E 5 272.418 188.162 334.624 1 0 ? C10 A1H9Q 301 A 1 HETATM 8 C C13 A1H9Q . . . E 5 270.437 183.974 336.108 1 0 ? C13 A1H9Q 301 A 1 HETATM 9 O O1 A1H9Q . . . E 5 281.274 192.941 331.856 1 0 ? O1 A1H9Q 301 A 1 HETATM 10 N N1 A1H9Q . . . E 5 275.927 190.058 333.428 1 0 ? N1 A1H9Q 301 A 1 HETATM 11 C C7 A1H9Q . . . E 5 274.75 189.422 333.829 1 0 ? C7 A1H9Q 301 A 1 HETATM 12 C C8 A1H9Q . . . E 5 273.854 188.953 332.878 1 0 ? C8 A1H9Q 301 A 1 HETATM 13 C C9 A1H9Q . . . E 5 272.691 188.325 333.277 1 0 ? C9 A1H9Q 301 A 1 HETATM 14 C C11 A1H9Q . . . E 5 271.15 187.475 335.057 1 0 ? C11 A1H9Q 301 A 1 HETATM 15 N N2 A1H9Q . . . E 5 271.392 186.032 335.183 1 0 ? N2 A1H9Q 301 A 1 HETATM 16 C C12 A1H9Q . . . E 5 270.206 185.461 335.833 1 0 ? C12 A1H9Q 301 A 1 HETATM 17 N N3 A1H9Q . . . E 5 271.555 183.814 337.047 1 0 ? N3 A1H9Q 301 A 1 HETATM 18 C C14 A1H9Q . . . E 5 271.797 182.371 337.171 1 0 ? C14 A1H9Q 301 A 1 HETATM 19 C C15 A1H9Q . . . E 5 272.741 184.387 336.396 1 0 ? C15 A1H9Q 301 A 1 HETATM 20 C C16 A1H9Q . . . E 5 272.51 185.872 336.12 1 0 ? C16 A1H9Q 301 A 1 HETATM 21 C C17 A1H9Q . . . E 5 273.308 188.629 335.573 1 0 ? C17 A1H9Q 301 A 1 HETATM 22 C C18 A1H9Q . . . E 5 274.477 189.252 335.181 1 0 ? C18 A1H9Q 301 A 1 HETATM 23 C C19 A1H9Q . . . E 5 279.155 190.428 333.415 1 0 ? C19 A1H9Q 301 A 1 HETATM 24 C C20 A1H9Q . . . E 5 280.233 191.01 332.778 1 0 ? C20 A1H9Q 301 A 1 HETATM 25 H H8 A1H9Q . . . E 5 276.12 190.173 332.483 1 0 ? H8 A1H9Q 301 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 40 _model_server_stats.element_count 25 #