data_8S7P # _model_server_result.job_id W45ug3hPqI7TvdJgTZ3W5A _model_server_result.datetime_utc '2025-02-23 20:42:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8s7p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 8S7P # _exptl.entry_id 8S7P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8S7P _cell.length_a 90.142 _cell.length_b 143.224 _cell.length_c 287.748 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8S7P _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,G,H 1 1 C,F,I 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 8S7P _atom_sites.fract_transf_matrix[1][1] 0.011094 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006982 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003475 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 FAD A 1 601 601 FAD FAD . E 2 FAD B 1 601 601 FAD FAD . F 2 FAD C 1 601 601 FAD FAD . G 3 HOH A 1 701 48 HOH HOH . G 3 HOH A 2 702 51 HOH HOH . G 3 HOH A 3 703 31 HOH HOH . G 3 HOH A 4 704 35 HOH HOH . G 3 HOH A 5 705 50 HOH HOH . G 3 HOH A 6 706 43 HOH HOH . G 3 HOH A 7 707 42 HOH HOH . G 3 HOH A 8 708 8 HOH HOH . G 3 HOH A 9 709 26 HOH HOH . G 3 HOH A 10 710 39 HOH HOH . G 3 HOH A 11 711 27 HOH HOH . G 3 HOH A 12 712 57 HOH HOH . G 3 HOH A 13 713 30 HOH HOH . G 3 HOH A 14 714 2 HOH HOH . G 3 HOH A 15 715 4 HOH HOH . G 3 HOH A 16 716 52 HOH HOH . H 3 HOH B 1 701 44 HOH HOH . H 3 HOH B 2 702 56 HOH HOH . H 3 HOH B 3 703 55 HOH HOH . H 3 HOH B 4 704 37 HOH HOH . H 3 HOH B 5 705 22 HOH HOH . H 3 HOH B 6 706 49 HOH HOH . H 3 HOH B 7 707 47 HOH HOH . H 3 HOH B 8 708 40 HOH HOH . H 3 HOH B 9 709 23 HOH HOH . H 3 HOH B 10 710 38 HOH HOH . H 3 HOH B 11 711 3 HOH HOH . H 3 HOH B 12 712 6 HOH HOH . H 3 HOH B 13 713 18 HOH HOH . I 3 HOH C 1 701 46 HOH HOH . I 3 HOH C 2 702 25 HOH HOH . I 3 HOH C 3 703 11 HOH HOH . I 3 HOH C 4 704 29 HOH HOH . I 3 HOH C 5 705 41 HOH HOH . I 3 HOH C 6 706 36 HOH HOH . I 3 HOH C 7 707 7 HOH HOH . I 3 HOH C 8 708 24 HOH HOH . I 3 HOH C 9 709 28 HOH HOH . I 3 HOH C 10 710 32 HOH HOH . I 3 HOH C 11 711 53 HOH HOH . I 3 HOH C 12 712 9 HOH HOH . I 3 HOH C 13 713 45 HOH HOH . I 3 HOH C 14 714 20 HOH HOH . I 3 HOH C 15 715 33 HOH HOH . I 3 HOH C 16 716 10 HOH HOH . I 3 HOH C 17 717 17 HOH HOH . I 3 HOH C 18 718 1 HOH HOH . I 3 HOH C 19 719 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . E 2 29.037 -6.725 60.676 1 59.27 ? PA FAD 601 B 1 HETATM 2 O O1A FAD . . . E 2 28.854 -7.793 61.71 1 63.43 ? O1A FAD 601 B 1 HETATM 3 O O2A FAD . . . E 2 30.066 -6.994 59.631 1 61.57 ? O2A FAD 601 B 1 HETATM 4 O O5B FAD . . . E 2 27.615 -6.457 59.981 1 63.1 ? O5B FAD 601 B 1 HETATM 5 C C5B FAD . . . E 2 26.396 -6.299 60.756 1 57.49 ? C5B FAD 601 B 1 HETATM 6 C C4B FAD . . . E 2 25.251 -7.002 60.062 1 66.64 ? C4B FAD 601 B 1 HETATM 7 O O4B FAD . . . E 2 24.953 -6.384 58.775 1 66.08 ? O4B FAD 601 B 1 HETATM 8 C C3B FAD . . . E 2 25.474 -8.487 59.749 1 62.22 ? C3B FAD 601 B 1 HETATM 9 O O3B FAD . . . E 2 24.987 -9.277 60.818 1 70.75 ? O3B FAD 601 B 1 HETATM 10 C C2B FAD . . . E 2 24.609 -8.718 58.502 1 63.79 ? C2B FAD 601 B 1 HETATM 11 O O2B FAD . . . E 2 23.248 -9.026 58.763 1 57.05 ? O2B FAD 601 B 1 HETATM 12 C C1B FAD . . . E 2 24.74 -7.376 57.785 1 59.69 ? C1B FAD 601 B 1 HETATM 13 N N9A FAD . . . E 2 25.835 -7.295 56.794 1 65.39 ? N9A FAD 601 B 1 HETATM 14 C C8A FAD . . . E 2 27.172 -6.998 56.999 1 61.54 ? C8A FAD 601 B 1 HETATM 15 N N7A FAD . . . E 2 27.863 -6.968 55.883 1 55.18 ? N7A FAD 601 B 1 HETATM 16 C C5A FAD . . . E 2 26.937 -7.246 54.889 1 62.64 ? C5A FAD 601 B 1 HETATM 17 C C6A FAD . . . E 2 27.044 -7.331 53.485 1 67.23 ? C6A FAD 601 B 1 HETATM 18 N N6A FAD . . . E 2 28.19 -7.165 52.825 1 59.33 ? N6A FAD 601 B 1 HETATM 19 N N1A FAD . . . E 2 25.911 -7.61 52.785 1 64.29 ? N1A FAD 601 B 1 HETATM 20 C C2A FAD . . . E 2 24.77 -7.799 53.462 1 58.52 ? C2A FAD 601 B 1 HETATM 21 N N3A FAD . . . E 2 24.556 -7.742 54.776 1 59.3 ? N3A FAD 601 B 1 HETATM 22 C C4A FAD . . . E 2 25.689 -7.45 55.439 1 61.18 ? C4A FAD 601 B 1 HETATM 23 N N1 FAD . . . E 2 27.583 0.587 66.953 1 68.81 ? N1 FAD 601 B 1 HETATM 24 C C2 FAD . . . E 2 27.453 1.858 66.484 1 77.93 ? C2 FAD 601 B 1 HETATM 25 O O2 FAD . . . E 2 26.889 2.07 65.407 1 67.81 ? O2 FAD 601 B 1 HETATM 26 N N3 FAD . . . E 2 27.941 2.956 67.181 1 83.41 ? N3 FAD 601 B 1 HETATM 27 C C4 FAD . . . E 2 28.606 2.821 68.385 1 80.59 ? C4 FAD 601 B 1 HETATM 28 O O4 FAD . . . E 2 29.028 3.826 68.964 1 63.46 ? O4 FAD 601 B 1 HETATM 29 C C4X FAD . . . E 2 28.767 1.469 68.898 1 75.43 ? C4X FAD 601 B 1 HETATM 30 N N5 FAD . . . E 2 29.38 1.291 70.046 1 75.5 ? N5 FAD 601 B 1 HETATM 31 C C5X FAD . . . E 2 29.497 0.007 70.509 1 72.69 ? C5X FAD 601 B 1 HETATM 32 C C6 FAD . . . E 2 30.156 -0.217 71.733 1 68.45 ? C6 FAD 601 B 1 HETATM 33 C C7 FAD . . . E 2 30.308 -1.484 72.252 1 72.07 ? C7 FAD 601 B 1 HETATM 34 C C7M FAD . . . E 2 31.026 -1.669 73.569 1 68.76 ? C7M FAD 601 B 1 HETATM 35 C C8 FAD . . . E 2 29.791 -2.604 71.52 1 73.99 ? C8 FAD 601 B 1 HETATM 36 C C8M FAD . . . E 2 29.974 -4.031 71.981 1 70.4 ? C8M FAD 601 B 1 HETATM 37 C C9 FAD . . . E 2 29.161 -2.387 70.324 1 84.18 ? C9 FAD 601 B 1 HETATM 38 C C9A FAD . . . E 2 28.993 -1.097 69.797 1 75.38 ? C9A FAD 601 B 1 HETATM 39 N N10 FAD . . . E 2 28.371 -0.876 68.574 1 65.3 ? N10 FAD 601 B 1 HETATM 40 C C10 FAD . . . E 2 28.215 0.402 68.093 1 66.38 ? C10 FAD 601 B 1 HETATM 41 C C1' FAD . . . E 2 27.844 -2.026 67.812 1 66.97 ? C1' FAD 601 B 1 HETATM 42 C C2' FAD . . . E 2 28.894 -2.698 66.912 1 66.64 ? C2' FAD 601 B 1 HETATM 43 O O2' FAD . . . E 2 30.11 -3.068 67.563 1 69.53 ? O2' FAD 601 B 1 HETATM 44 C C3' FAD . . . E 2 29.254 -1.794 65.732 1 63.6 ? C3' FAD 601 B 1 HETATM 45 O O3' FAD . . . E 2 28.083 -1.53 65.003 1 61.31 ? O3' FAD 601 B 1 HETATM 46 C C4' FAD . . . E 2 30.237 -2.41 64.744 1 69.8 ? C4' FAD 601 B 1 HETATM 47 O O4' FAD . . . E 2 30.856 -1.361 63.998 1 70.82 ? O4' FAD 601 B 1 HETATM 48 C C5' FAD . . . E 2 29.556 -3.386 63.809 1 66.75 ? C5' FAD 601 B 1 HETATM 49 O O5' FAD . . . E 2 30.492 -4.417 63.39 1 65.48 ? O5' FAD 601 B 1 HETATM 50 P P FAD . . . E 2 30.754 -4.68 61.822 1 70.6 ? P FAD 601 B 1 HETATM 51 O O1P FAD . . . E 2 30.971 -3.332 61.215 1 55.52 ? O1P FAD 601 B 1 HETATM 52 O O2P FAD . . . E 2 31.786 -5.766 61.711 1 55.4 ? O2P FAD 601 B 1 HETATM 53 O O3P FAD . . . E 2 29.354 -5.28 61.296 1 57.15 ? O3P FAD 601 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 53 #